RNA–Protein interactions for RNA: ENST00000409782.5

LSM5-203, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-203ENST00000409782 EGLN2Q96KS0 407 aa5.86□□□□□ -1.47
LSM5-203ENST00000409782 LINC00615Q96LM1 132 aaPredicted RBP5.86□□□□□ -1.47
LSM5-203ENST00000409782 TSGA13Q96PP4 275 aa5.86□□□□□ -1.47
LSM5-203ENST00000409782 MCCC1Q96RQ3 725 aaPredicted RBP5.86□□□□□ -1.47
LSM5-203ENST00000409782 POLR1EQ9GZS1 481 aaKnown RBP5.86□□□□□ -1.47
LSM5-203ENST00000409782 SPAG4Q9NPE6 437 aa5.86□□□□□ -1.47
LSM5-203ENST00000409782 PNRC2Q9NPJ4 139 aaKnown RBP5.86□□□□□ -1.47
LSM5-203ENST00000409782 APOBEC3BQ9UH17 382 aaKnown RBP5.86□□□□□ -1.47
LSM5-203ENST00000409782 DNPEPQ9ULA0 475 aa5.86□□□□□ -1.47
LSM5-203ENST00000409782 R3HDM2Q9Y2K5 976 aaKnown RBP5.86□□□□□ -1.47
LSM5-203ENST00000409782 CSNK1G3Q9Y6M4 447 aa5.86□□□□□ -1.47
LSM5-203ENST00000409782 CHD6Q8TD26 2715 aa5.86□□□□□ -1.47
LSM5-203ENST00000409782 ANKRD36A6QL64 1941 aa5.86□□□□□ -1.47
LSM5-203ENST00000409782 HTR3EA5X5Y0 456 aa5.85□□□□□ -1.47
LSM5-203ENST00000409782 TMEM202A6NGA9 273 aa5.85□□□□□ -1.47
LSM5-203ENST00000409782 OR6C76A6NM76 312 aa5.85□□□□□ -1.47
LSM5-203ENST00000409782 CACNB4O00305 520 aaPredicted RBP5.85□□□□□ -1.47
LSM5-203ENST00000409782 PGLSO95336 258 aa5.85□□□□□ -1.47
LSM5-203ENST00000409782 LCA5LO95447 670 aa5.85□□□□□ -1.47
LSM5-203ENST00000409782 FTCDO95954 541 aa5.85□□□□□ -1.47
LSM5-203ENST00000409782 PRKCGP05129 697 aa5.85□□□□□ -1.47
LSM5-203ENST00000409782 PCCBP05166 539 aa5.85□□□□□ -1.47
LSM5-203ENST00000409782 GP1BAP07359 652 aa5.85□□□□□ -1.47
LSM5-203ENST00000409782 GIMD1P0DJR0 217 aa5.85□□□□□ -1.47
LSM5-203ENST00000409782 CYP2A6P11509 494 aaPredicted RBP5.85□□□□□ -1.47
LSM5-203ENST00000409782 VPREB1P12018 145 aa5.85□□□□□ -1.47
LSM5-203ENST00000409782 KELP23276 732 aa5.85□□□□□ -1.47
LSM5-203ENST00000409782 TEAD1P28347 426 aa5.85□□□□□ -1.47
LSM5-203ENST00000409782 DCTDP32321 178 aa5.85□□□□□ -1.47
LSM5-203ENST00000409782 CYLC1P35663 651 aaPredicted RBP5.85□□□□□ -1.47
LSM5-203ENST00000409782 ATP6V1E1P36543 226 aa5.85□□□□□ -1.47
LSM5-203ENST00000409782 ZNF75DP51815 510 aa5.85□□□□□ -1.47
LSM5-203ENST00000409782 MAXP61244 160 aa5.85□□□□□ -1.47
LSM5-203ENST00000409782 RPL26P61254 145 aaKnown RBP5.85□□□□□ -1.47
LSM5-203ENST00000409782 TUBB4BP68371 445 aa5.85□□□□□ -1.47
LSM5-203ENST00000409782 GBE1Q04446 702 aa5.85□□□□□ -1.47
LSM5-203ENST00000409782 PPIDQ08752 370 aaKnown RBP5.85□□□□□ -1.47
LSM5-203ENST00000409782 TRAF2Q12933 501 aa5.85□□□□□ -1.47
LSM5-203ENST00000409782 PTK6Q13882 451 aa5.85□□□□□ -1.47
LSM5-203ENST00000409782 ZRANB3Q5FWF4 1079 aa5.85□□□□□ -1.47
LSM5-203ENST00000409782 TPRG1LQ5T0D9 272 aa5.85□□□□□ -1.47
LSM5-203ENST00000409782 ARMC12Q5T9G4 340 aa5.85□□□□□ -1.47
LSM5-203ENST00000409782 C11orf63Q6NUN7 778 aa5.85□□□□□ -1.47
LSM5-203ENST00000409782 SDCCAG8Q86SQ7 713 aaPredicted RBP5.85□□□□□ -1.47
LSM5-203ENST00000409782 DDIASQ8IXT1 998 aa5.85□□□□□ -1.47
LSM5-203ENST00000409782 CCDC13Q8IYE1 715 aa5.85□□□□□ -1.47
LSM5-203ENST00000409782 SLC25A45Q8N413 288 aa5.85□□□□□ -1.47
LSM5-203ENST00000409782 PGBD5Q8N414 524 aa5.85□□□□□ -1.47
LSM5-203ENST00000409782 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.85□□□□□ -1.47
LSM5-203ENST00000409782 RAPGEF5Q92565 580 aa5.85□□□□□ -1.47
LSM5-203ENST00000409782 NXPE2Q96DL1 559 aa5.85□□□□□ -1.47
LSM5-203ENST00000409782 RNF157Q96PX1 679 aa5.85□□□□□ -1.47
LSM5-203ENST00000409782 PANX2Q96RD6 677 aa5.85□□□□□ -1.47
LSM5-203ENST00000409782 CDRT15Q96T59 188 aa5.85□□□□□ -1.47
LSM5-203ENST00000409782 SEMA3CQ99985 751 aa5.85□□□□□ -1.47
LSM5-203ENST00000409782 LRRC61Q9BV99 259 aa5.85□□□□□ -1.47
LSM5-203ENST00000409782 TDRD1Q9BXT4 1180 aaKnown RBP5.85□□□□□ -1.47
LSM5-203ENST00000409782 KCNK15Q9H427 330 aa5.85□□□□□ -1.47
LSM5-203ENST00000409782 NOL11Q9H8H0 719 aaKnown RBP5.85□□□□□ -1.47
LSM5-203ENST00000409782 EPB41L5Q9HCM4 733 aa5.85□□□□□ -1.47
LSM5-203ENST00000409782 NT5MQ9NPB1 228 aa5.85□□□□□ -1.47
LSM5-203ENST00000409782 SLC17A6Q9P2U8 582 aa5.85□□□□□ -1.47
LSM5-203ENST00000409782 SPASTQ9UBP0 616 aa5.85□□□□□ -1.47
LSM5-203ENST00000409782 PACSIN3Q9UKS6 424 aa5.85□□□□□ -1.47
LSM5-203ENST00000409782 RPL26L1Q9UNX3 145 aaKnown RBP5.85□□□□□ -1.47
LSM5-203ENST00000409782 LAMP3Q9UQV4 416 aa5.85□□□□□ -1.47
LSM5-203ENST00000409782 KLHL20Q9Y2M5 609 aa5.85□□□□□ -1.47
LSM5-203ENST00000409782 LRRK1Q38SD2 2015 aa5.84□□□□□ -1.47
LSM5-203ENST00000409782 PTPRBP23467 1997 aa5.84□□□□□ -1.47
LSM5-203ENST00000409782 SHROOM3Q8TF72 1996 aa5.84□□□□□ -1.47
LSM5-203ENST00000409782 ENO4A6NNW6 628 aa5.84□□□□□ -1.47
LSM5-203ENST00000409782 KDM4EB2RXH2 506 aaPredicted RBP5.84□□□□□ -1.47
LSM5-203ENST00000409782 LMO7DNF2Z398 122 aa5.84□□□□□ -1.47
LSM5-203ENST00000409782 RHODO00212 210 aa5.84□□□□□ -1.47
LSM5-203ENST00000409782 AQP9O43315 295 aa5.84□□□□□ -1.47
LSM5-203ENST00000409782 SPOPO43791 374 aa5.84□□□□□ -1.47
LSM5-203ENST00000409782 NEBLO76041 1014 aa5.84□□□□□ -1.47
LSM5-203ENST00000409782 NDUFB4O95168 129 aa5.84□□□□□ -1.47
LSM5-203ENST00000409782 MT-ND3P03897 115 aa5.84□□□□□ -1.47
LSM5-203ENST00000409782 HLA-DQB2P05538 268 aa5.84□□□□□ -1.47
LSM5-203ENST00000409782 HOXC4P09017 264 aaPredicted RBP5.84□□□□□ -1.47
LSM5-203ENST00000409782 ALPIP09923 528 aa5.84□□□□□ -1.47
LSM5-203ENST00000409782 LINGO3P0C6S8 592 aa5.84□□□□□ -1.47
LSM5-203ENST00000409782 ENO3P13929 434 aaPredicted RBP5.84□□□□□ -1.47
LSM5-203ENST00000409782 LHCGRP22888 699 aa5.84□□□□□ -1.47
LSM5-203ENST00000409782 KDELR1P24390 212 aa5.84□□□□□ -1.47
LSM5-203ENST00000409782 CCNCP24863 283 aa5.84□□□□□ -1.47
LSM5-203ENST00000409782 DUSP3P51452 185 aaPredicted RBP5.84□□□□□ -1.47
LSM5-203ENST00000409782 CAPZA1P52907 286 aa5.84□□□□□ -1.47
LSM5-203ENST00000409782 SORDQ00796 357 aa5.84□□□□□ -1.47
LSM5-203ENST00000409782 SPOCK1Q08629 439 aa5.84□□□□□ -1.47
LSM5-203ENST00000409782 DNAJC3Q13217 504 aa5.84□□□□□ -1.47
LSM5-203ENST00000409782 PTPRCAPQ14761 206 aa5.84□□□□□ -1.47
LSM5-203ENST00000409782 PDK1Q15118 436 aa5.84□□□□□ -1.47
LSM5-203ENST00000409782 SPA17Q15506 151 aa5.84□□□□□ -1.47
LSM5-203ENST00000409782 TAZQ16635 292 aa5.84□□□□□ -1.47
LSM5-203ENST00000409782 PNLIPRP3Q17RR3 467 aa5.84□□□□□ -1.47
LSM5-203ENST00000409782 SMU1Q2TAY7 513 aa5.84□□□□□ -1.47
LSM5-203ENST00000409782 ZNF542PQ5EBM4 170 aa5.84□□□□□ -1.47
LSM5-203ENST00000409782 HES3Q5TGS1 186 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms