RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 SIGLEC6O43699 453 aa10.81□□□□□ -0.68
SNX13-202ENST00000409604 ETHE1O95571 254 aa10.81□□□□□ -0.68
SNX13-202ENST00000409604 CD1EP15812 388 aa10.81□□□□□ -0.68
SNX13-202ENST00000409604 SLC7A1P30825 629 aa10.81□□□□□ -0.68
SNX13-202ENST00000409604 AQP4P55087 323 aa10.81□□□□□ -0.68
SNX13-202ENST00000409604 MS4A2Q01362 244 aa10.81□□□□□ -0.68
SNX13-202ENST00000409604 FAM91A1Q658Y4 838 aa10.81□□□□□ -0.68
SNX13-202ENST00000409604 UBE2Q1Q7Z7E8 422 aa10.81□□□□□ -0.68
SNX13-202ENST00000409604 PROSER1Q86XN7 944 aa10.81□□□□□ -0.68
SNX13-202ENST00000409604 TMEM151BQ8IW70 566 aa10.81□□□□□ -0.68
SNX13-202ENST00000409604 OR4K3Q96R72 315 aa10.81□□□□□ -0.68
SNX13-202ENST00000409604 EDEM2Q9BV94 578 aa10.81□□□□□ -0.68
SNX13-202ENST00000409604 OR52A5Q9H2C5 316 aa10.81□□□□□ -0.68
SNX13-202ENST00000409604 KIR3DX1Q9H7L2 352 aa10.81□□□□□ -0.68
SNX13-202ENST00000409604 FAM120CQ9NX05 1096 aaKnown RBP10.81□□□□□ -0.68
SNX13-202ENST00000409604 FAM53CQ9NYF3 392 aa10.81□□□□□ -0.68
SNX13-202ENST00000409604 PLCL2Q9UPR0 1127 aa10.81□□□□□ -0.68
SNX13-202ENST00000409604 NME4O00746 187 aa10.81□□□□□ -0.68
SNX13-202ENST00000409604 HNRNPRO43390 633 aaKnown RBP10.81□□□□□ -0.68
SNX13-202ENST00000409604 T-ENOLP0DO92 83 aa10.81□□□□□ -0.68
SNX13-202ENST00000409604 MPLP40238 635 aa10.81□□□□□ -0.68
SNX13-202ENST00000409604 NUDT6P53370 316 aa10.81□□□□□ -0.68
SNX13-202ENST00000409604 NRG3P56975 720 aa10.81□□□□□ -0.68
SNX13-202ENST00000409604 HBA1P69905 142 aa10.81□□□□□ -0.68
SNX13-202ENST00000409604 ZP2Q05996 745 aa10.81□□□□□ -0.68
SNX13-202ENST00000409604 LEXMQ3ZCV2 418 aa10.81□□□□□ -0.68
SNX13-202ENST00000409604 C14orf28Q4W4Y0 310 aa10.81□□□□□ -0.68
SNX13-202ENST00000409604 LACTB2Q53H82 288 aaPredicted RBP10.81□□□□□ -0.68
SNX13-202ENST00000409604 FRMPD2BQ6IN97 320 aa10.81□□□□□ -0.68
SNX13-202ENST00000409604 GUSBP11Q6P575 273 aa10.81□□□□□ -0.68
SNX13-202ENST00000409604 RETREG3Q86VR2 466 aa10.81□□□□□ -0.68
SNX13-202ENST00000409604 TP53I13Q8NBR0 393 aaPredicted RBP10.81□□□□□ -0.68
SNX13-202ENST00000409604 PIK3R3Q92569 461 aa10.81□□□□□ -0.68
SNX13-202ENST00000409604 C8orf44Q96CB5 159 aa10.81□□□□□ -0.68
SNX13-202ENST00000409604 C16orf58Q96GQ5 468 aa10.81□□□□□ -0.68
SNX13-202ENST00000409604 MSLNLQ96KJ4 702 aa10.81□□□□□ -0.68
SNX13-202ENST00000409604 ANKRD27Q96NW4 1050 aa10.81□□□□□ -0.68
SNX13-202ENST00000409604 NTMT1Q9BV86 223 aa10.81□□□□□ -0.68
SNX13-202ENST00000409604 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.81□□□□□ -0.68
SNX13-202ENST00000409604 RPH3AQ9Y2J0 694 aaPredicted RBP10.81□□□□□ -0.68
SNX13-202ENST00000409604 C5orf42Q9H799 3197 aa10.81□□□□□ -0.68
SNX13-202ENST00000409604 C1orf226A1L170 272 aa10.81□□□□□ -0.68
SNX13-202ENST00000409604 C17orf105B2RV13 164 aa10.81□□□□□ -0.68
SNX13-202ENST00000409604 GAPDHSO14556 408 aaPredicted RBP10.81□□□□□ -0.68
SNX13-202ENST00000409604 PEPDP12955 493 aa10.81□□□□□ -0.68
SNX13-202ENST00000409604 ITGA2P17301 1181 aa10.81□□□□□ -0.68
SNX13-202ENST00000409604 IGFBP5P24593 272 aa10.81□□□□□ -0.68
SNX13-202ENST00000409604 SLC9A3P48764 834 aa10.81□□□□□ -0.68
SNX13-202ENST00000409604 EMP2P54851 167 aa10.81□□□□□ -0.68
SNX13-202ENST00000409604 RPS15P62841 145 aaKnown RBP10.81□□□□□ -0.68
SNX13-202ENST00000409604 EEF1A2Q05639 463 aaKnown RBP10.81□□□□□ -0.68
SNX13-202ENST00000409604 SELPLGQ14242 412 aa10.81□□□□□ -0.68
SNX13-202ENST00000409604 FZD2Q14332 565 aa10.81□□□□□ -0.68
SNX13-202ENST00000409604 HERC3Q15034 1050 aa10.81□□□□□ -0.68
SNX13-202ENST00000409604 SNAPC1Q16533 368 aa10.81□□□□□ -0.68
SNX13-202ENST00000409604 CYBRD1Q53TN4 286 aa10.81□□□□□ -0.68
SNX13-202ENST00000409604 C19orf47Q8N9M1 422 aaKnown RBP10.81□□□□□ -0.68
SNX13-202ENST00000409604 OR52L1Q8NGH7 329 aa10.81□□□□□ -0.68
SNX13-202ENST00000409604 PDLIM5Q96HC4 596 aaKnown RBP10.81□□□□□ -0.68
SNX13-202ENST00000409604 BRD7Q9NPI1 651 aa10.81□□□□□ -0.68
SNX13-202ENST00000409604 KRCC1Q9NPI7 259 aaPredicted RBP10.81□□□□□ -0.68
SNX13-202ENST00000409604 TVP23BQ9NYZ1 205 aa10.81□□□□□ -0.68
SNX13-202ENST00000409604 HS3ST3A1Q9Y663 406 aa10.81□□□□□ -0.68
SNX13-202ENST00000409604 PCNX1Q96RV3 2341 aa10.81□□□□□ -0.68
SNX13-202ENST00000409604 ARHGEF17Q96PE2 2063 aaPredicted RBP10.8□□□□□ -0.68
SNX13-202ENST00000409604 PIKFYVEQ9Y2I7 2098 aa10.8□□□□□ -0.68
SNX13-202ENST00000409604 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.8□□□□□ -0.68
SNX13-202ENST00000409604 ANHXE9PGG2 379 aa10.8□□□□□ -0.68
SNX13-202ENST00000409604 BLOC1S5-TXNDC5H3BN57 136 aa10.8□□□□□ -0.68
SNX13-202ENST00000409604 SCAMP2O15127 329 aaKnown RBP10.8□□□□□ -0.68
SNX13-202ENST00000409604 AP1G1O43747 822 aa10.8□□□□□ -0.68
SNX13-202ENST00000409604 CLPTM1O96005 669 aa10.8□□□□□ -0.68
SNX13-202ENST00000409604 PLGLB1Q02325 96 aa10.8□□□□□ -0.68
SNX13-202ENST00000409604 SGCBQ16585 318 aa10.8□□□□□ -0.68
SNX13-202ENST00000409604 ENPP6Q6UWR7 440 aa10.8□□□□□ -0.68
SNX13-202ENST00000409604 C6orf89Q6UWU4 347 aa10.8□□□□□ -0.68
SNX13-202ENST00000409604 ZNF540Q8NDQ6 660 aa10.8□□□□□ -0.68
SNX13-202ENST00000409604 OR51A7Q8NH64 312 aa10.8□□□□□ -0.68
SNX13-202ENST00000409604 ADOQ96SZ5 270 aa10.8□□□□□ -0.68
SNX13-202ENST00000409604 LPAR4Q99677 370 aa10.8□□□□□ -0.68
SNX13-202ENST00000409604 ARHGAP9Q9BRR9 750 aa10.8□□□□□ -0.68
SNX13-202ENST00000409604 C3orf18Q9UK00 162 aa10.8□□□□□ -0.68
SNX13-202ENST00000409604 C15orf41Q9Y2V0 281 aa10.8□□□□□ -0.68
SNX13-202ENST00000409604 PCDHGA4Q9Y5G9 962 aa10.8□□□□□ -0.68
SNX13-202ENST00000409604 FGF4P08620 206 aa10.8□□□□□ -0.68
SNX13-202ENST00000409604 CDKN2CP42773 168 aa10.8□□□□□ -0.68
SNX13-202ENST00000409604 CTC1Q2NKJ3 1217 aa10.8□□□□□ -0.68
SNX13-202ENST00000409604 PDCD4Q53EL6 469 aaKnown RBP10.8□□□□□ -0.68
SNX13-202ENST00000409604 FAM199XQ6PEV8 388 aaPredicted RBP10.8□□□□□ -0.68
SNX13-202ENST00000409604 ARL10Q8N8L6 244 aa10.8□□□□□ -0.68
SNX13-202ENST00000409604 OR2L8Q8NGY9 312 aa10.8□□□□□ -0.68
SNX13-202ENST00000409604 KLHL1Q9NR64 748 aa10.8□□□□□ -0.68
SNX13-202ENST00000409604 SDR39U1Q9NRG7 319 aaPredicted RBP10.8□□□□□ -0.68
SNX13-202ENST00000409604 CUTCQ9NTM9 273 aa10.8□□□□□ -0.68
SNX13-202ENST00000409604 SH3BGRL2Q9UJC5 107 aa10.8□□□□□ -0.68
SNX13-202ENST00000409604 SLCO1B1Q9Y6L6 691 aa10.8□□□□□ -0.68
SNX13-202ENST00000409604 CACNA1AO00555 2505 aa10.8□□□□□ -0.68
SNX13-202ENST00000409604 SCDO00767 359 aa10.8□□□□□ -0.68
SNX13-202ENST00000409604 ZNF749O43361 778 aa10.8□□□□□ -0.68
SNX13-202ENST00000409604 SCELO95171 688 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms