RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 ACANP16112 2415 aa7.14□□□□□ -1.27
LSM5-202ENST00000409292 GDF1P27539 372 aa7.14□□□□□ -1.27
LSM5-202ENST00000409292 TIMP3P35625 211 aa7.14□□□□□ -1.27
LSM5-202ENST00000409292 CPA2P48052 419 aa7.14□□□□□ -1.27
LSM5-202ENST00000409292 KCNC1P48547 511 aa7.14□□□□□ -1.27
LSM5-202ENST00000409292 MASP1P48740 699 aa7.14□□□□□ -1.27
LSM5-202ENST00000409292 TMED10P49755 219 aaKnown RBP7.14□□□□□ -1.27
LSM5-202ENST00000409292 DCAF7P61962 342 aa7.14□□□□□ -1.27
LSM5-202ENST00000409292 RAC1P63000 192 aa7.14□□□□□ -1.27
LSM5-202ENST00000409292 NKX6-1P78426 367 aaPredicted RBP7.14□□□□□ -1.27
LSM5-202ENST00000409292 CDKL1Q00532 357 aa7.14□□□□□ -1.27
LSM5-202ENST00000409292 PLIN5Q00G26 463 aa7.14□□□□□ -1.27
LSM5-202ENST00000409292 LAPTM5Q13571 262 aa7.14□□□□□ -1.27
LSM5-202ENST00000409292 RUNX2Q13950 521 aa7.14□□□□□ -1.27
LSM5-202ENST00000409292 SLBPQ14493 270 aaKnown RBP eCLIP7.14□□□□□ -1.27
LSM5-202ENST00000409292 CRYMQ14894 314 aa7.14□□□□□ -1.27
LSM5-202ENST00000409292 TOMM20Q15388 145 aa7.14□□□□□ -1.27
LSM5-202ENST00000409292 PPP1R7Q15435 360 aa7.14□□□□□ -1.27
LSM5-202ENST00000409292 AP5B1Q2VPB7 878 aa7.14□□□□□ -1.27
LSM5-202ENST00000409292 XKR6Q5GH73 641 aa7.14□□□□□ -1.27
LSM5-202ENST00000409292 C6orf163Q5TEZ5 329 aa7.14□□□□□ -1.27
LSM5-202ENST00000409292 HLA-DQA1Q5Y7H0 255 aa7.14□□□□□ -1.27
LSM5-202ENST00000409292 GALNT7Q86SF2 657 aa7.14□□□□□ -1.27
LSM5-202ENST00000409292 LIX1LQ8IVB5 337 aa7.14□□□□□ -1.27
LSM5-202ENST00000409292 ULK2Q8IYT8 1036 aa7.14□□□□□ -1.27
LSM5-202ENST00000409292 SHISA5Q8N114 240 aa7.14□□□□□ -1.27
LSM5-202ENST00000409292 ANKRD53Q8N9V6 530 aa7.14□□□□□ -1.27
LSM5-202ENST00000409292 NEIL3Q8TAT5 605 aa7.14□□□□□ -1.27
LSM5-202ENST00000409292 NUBPLQ8TB37 319 aa7.14□□□□□ -1.27
LSM5-202ENST00000409292 SLC2A12Q8TD20 617 aa7.14□□□□□ -1.27
LSM5-202ENST00000409292 SLCO2A1Q92959 643 aa7.14□□□□□ -1.27
LSM5-202ENST00000409292 PIGTQ969N2 578 aa7.14□□□□□ -1.27
LSM5-202ENST00000409292 ISL2Q96A47 359 aa7.14□□□□□ -1.27
LSM5-202ENST00000409292 MS4A6EQ96DS6 147 aa7.14□□□□□ -1.27
LSM5-202ENST00000409292 PDLIM5Q96HC4 596 aaKnown RBP7.14□□□□□ -1.27
LSM5-202ENST00000409292 ZNF597Q96LX8 424 aa7.14□□□□□ -1.27
LSM5-202ENST00000409292 KCNC2Q96PR1 638 aa7.14□□□□□ -1.27
LSM5-202ENST00000409292 OR4K3Q96R72 315 aa7.14□□□□□ -1.27
LSM5-202ENST00000409292 TBCDQ9BTW9 1192 aa7.14□□□□□ -1.27
LSM5-202ENST00000409292 DOHHQ9BU89 302 aa7.14□□□□□ -1.27
LSM5-202ENST00000409292 BDH2Q9BUT1 245 aa7.14□□□□□ -1.27
LSM5-202ENST00000409292 EFCAB11Q9BUY7 163 aa7.14□□□□□ -1.27
LSM5-202ENST00000409292 ACBD3Q9H3P7 528 aa7.14□□□□□ -1.27
LSM5-202ENST00000409292 LIME1Q9H400 295 aa7.14□□□□□ -1.27
LSM5-202ENST00000409292 LIN28AQ9H9Z2 209 aaKnown RBP7.14□□□□□ -1.27
LSM5-202ENST00000409292 LYRM4Q9HD34 91 aa7.14□□□□□ -1.27
LSM5-202ENST00000409292 DLL4Q9NR61 685 aa7.14□□□□□ -1.27
LSM5-202ENST00000409292 MS4A12Q9NXJ0 267 aa7.14□□□□□ -1.27
LSM5-202ENST00000409292 TUBA8Q9NY65 449 aaPredicted RBP7.14□□□□□ -1.27
LSM5-202ENST00000409292 GPRC5BQ9NZH0 403 aa7.14□□□□□ -1.27
LSM5-202ENST00000409292 CTNNAL1Q9UBT7 734 aa7.14□□□□□ -1.27
LSM5-202ENST00000409292 NDRG3Q9UGV2 375 aa7.14□□□□□ -1.27
LSM5-202ENST00000409292 ZNF223Q9UK11 482 aaPredicted RBP7.14□□□□□ -1.27
LSM5-202ENST00000409292 CBLCQ9ULV8 474 aa7.14□□□□□ -1.27
LSM5-202ENST00000409292 DAPP1Q9UN19 280 aa7.14□□□□□ -1.27
LSM5-202ENST00000409292 ATG4BQ9Y4P1 393 aa7.14□□□□□ -1.27
LSM5-202ENST00000409292 LIPGQ9Y5X9 500 aa7.14□□□□□ -1.27
LSM5-202ENST00000409292 CSMD2Q7Z408 3487 aa7.14□□□□□ -1.27
LSM5-202ENST00000409292 CELSR1Q9NYQ6 3014 aa7.14□□□□□ -1.27
LSM5-202ENST00000409292 CLCA1A8K7I4 914 aa7.13□□□□□ -1.27
LSM5-202ENST00000409292 FAM229AH3BQW9 127 aa7.13□□□□□ -1.27
LSM5-202ENST00000409292 PRKNO60260 465 aaPredicted RBP7.13□□□□□ -1.27
LSM5-202ENST00000409292 OR10H2O60403 315 aa7.13□□□□□ -1.27
LSM5-202ENST00000409292 SMPD2O60906 423 aa7.13□□□□□ -1.27
LSM5-202ENST00000409292 SNX4O95219 450 aa7.13□□□□□ -1.27
LSM5-202ENST00000409292 ATE1O95260 518 aa7.13□□□□□ -1.27
LSM5-202ENST00000409292 CCL3P10147 92 aa7.13□□□□□ -1.27
LSM5-202ENST00000409292 BMP7P18075 431 aa7.13□□□□□ -1.27
LSM5-202ENST00000409292 KRT15P19012 456 aa7.13□□□□□ -1.27
LSM5-202ENST00000409292 CPN2P22792 545 aa7.13□□□□□ -1.27
LSM5-202ENST00000409292 CTSSP25774 331 aa7.13□□□□□ -1.27
LSM5-202ENST00000409292 SERPINB1P30740 379 aa7.13□□□□□ -1.27
LSM5-202ENST00000409292 PIGAP37287 484 aa7.13□□□□□ -1.27
LSM5-202ENST00000409292 IDH3AP50213 366 aa7.13□□□□□ -1.27
LSM5-202ENST00000409292 DIO3P55073 304 aa7.13□□□□□ -1.27
LSM5-202ENST00000409292 LIM2P55344 173 aa7.13□□□□□ -1.27
LSM5-202ENST00000409292 NRG3P56975 720 aa7.13□□□□□ -1.27
LSM5-202ENST00000409292 PHEXP78562 749 aa7.13□□□□□ -1.27
LSM5-202ENST00000409292 ASPHQ12797 758 aa7.13□□□□□ -1.27
LSM5-202ENST00000409292 SNTB1Q13884 538 aaKnown RBP7.13□□□□□ -1.27
LSM5-202ENST00000409292 TMEM35AQ53FP2 167 aa7.13□□□□□ -1.27
LSM5-202ENST00000409292 PIGGQ5H8A4 983 aa7.13□□□□□ -1.27
LSM5-202ENST00000409292 ANKRD22Q5VYY1 191 aa7.13□□□□□ -1.27
LSM5-202ENST00000409292 RTL6Q6ICC9 239 aa7.13□□□□□ -1.27
LSM5-202ENST00000409292 CCDC137Q6PK04 289 aaKnown RBP7.13□□□□□ -1.27
LSM5-202ENST00000409292 C16orf47Q6ZP98 133 aaPredicted RBP7.13□□□□□ -1.27
LSM5-202ENST00000409292 SYDE1Q6ZW31 735 aaPredicted RBP7.13□□□□□ -1.27
LSM5-202ENST00000409292 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.13□□□□□ -1.27
LSM5-202ENST00000409292 PDIK1LQ8N165 341 aa7.13□□□□□ -1.27
LSM5-202ENST00000409292 RASGEF1CQ8N431 466 aa7.13□□□□□ -1.27
LSM5-202ENST00000409292 SNX31Q8N9S9 440 aa7.13□□□□□ -1.27
LSM5-202ENST00000409292 SIMC1Q8NDZ2 872 aa7.13□□□□□ -1.27
LSM5-202ENST00000409292 SREK1Q8WXA9 508 aaKnown RBP7.13□□□□□ -1.27
LSM5-202ENST00000409292 UCN3Q969E3 161 aa7.13□□□□□ -1.27
LSM5-202ENST00000409292 SPACA9Q96E40 222 aaPredicted RBP7.13□□□□□ -1.27
LSM5-202ENST00000409292 CERS2Q96G23 380 aa7.13□□□□□ -1.27
LSM5-202ENST00000409292 DACH2Q96NX9 599 aa7.13□□□□□ -1.27
LSM5-202ENST00000409292 GAL3ST4Q96RP7 486 aa7.13□□□□□ -1.27
LSM5-202ENST00000409292 CNPPD1Q9BV87 410 aa7.13□□□□□ -1.27
LSM5-202ENST00000409292 EHD1Q9H4M9 534 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms