RNA–Protein interactions for RNA: ENST00000406503.1

PRAME-206, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRAME, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-206ENST00000406503 TNFRSF17Q02223 184 aa11.84□□□□□ -0.51
PRAME-206ENST00000406503 FOLH1Q04609 750 aa11.84□□□□□ -0.51
PRAME-206ENST00000406503 PCDH1Q08174 1060 aa11.84□□□□□ -0.51
PRAME-206ENST00000406503 TGM3Q08188 693 aa11.84□□□□□ -0.51
PRAME-206ENST00000406503 LAPTM5Q13571 262 aa11.84□□□□□ -0.51
PRAME-206ENST00000406503 EBPQ15125 230 aaKnown RBP11.84□□□□□ -0.51
PRAME-206ENST00000406503 PAGE2BQ5JRK9 111 aa11.84□□□□□ -0.51
PRAME-206ENST00000406503 DEPDC1Q5TB30 811 aa11.84□□□□□ -0.51
PRAME-206ENST00000406503 KHDRBS2Q5VWX1 349 aaKnown RBP11.84□□□□□ -0.51
PRAME-206ENST00000406503 SLC22A10Q63ZE4 541 aa11.84□□□□□ -0.51
PRAME-206ENST00000406503 LRRC70Q7Z2Q7 622 aa11.84□□□□□ -0.51
PRAME-206ENST00000406503 WDR53Q7Z5U6 358 aaPredicted RBP11.84□□□□□ -0.51
PRAME-206ENST00000406503 ISCA2Q86U28 154 aa11.84□□□□□ -0.51
PRAME-206ENST00000406503 FBXW8Q8N3Y1 598 aa11.84□□□□□ -0.51
PRAME-206ENST00000406503 ZNF441Q8N8Z8 693 aa11.84□□□□□ -0.51
PRAME-206ENST00000406503 EXT2Q93063 718 aa11.84□□□□□ -0.51
PRAME-206ENST00000406503 UCN3Q969E3 161 aa11.84□□□□□ -0.51
PRAME-206ENST00000406503 FBXL20Q96IG2 436 aa11.84□□□□□ -0.51
PRAME-206ENST00000406503 DGAT2Q96PD7 388 aa11.84□□□□□ -0.51
PRAME-206ENST00000406503 ATOH8Q96SQ7 321 aa11.84□□□□□ -0.51
PRAME-206ENST00000406503 ROGDIQ9GZN7 287 aa11.84□□□□□ -0.51
PRAME-206ENST00000406503 OR51B5Q9H339 312 aa11.84□□□□□ -0.51
PRAME-206ENST00000406503 LDAHQ9H6V9 325 aa11.84□□□□□ -0.51
PRAME-206ENST00000406503 SLC24A3Q9HC58 644 aa11.84□□□□□ -0.51
PRAME-206ENST00000406503 ZFP64Q9NPA5 681 aa11.84□□□□□ -0.51
PRAME-206ENST00000406503 ACKR4Q9NPB9 350 aa11.84□□□□□ -0.51
PRAME-206ENST00000406503 RASSF1Q9NS23 344 aa11.84□□□□□ -0.51
PRAME-206ENST00000406503 NSMCE4AQ9NXX6 385 aa11.84□□□□□ -0.51
PRAME-206ENST00000406503 CD274Q9NZQ7 290 aa11.84□□□□□ -0.51
PRAME-206ENST00000406503 COPS7AQ9UBW8 275 aa11.84□□□□□ -0.51
PRAME-206ENST00000406503 PCDHGB3Q9Y5G1 929 aa11.84□□□□□ -0.51
PRAME-206ENST00000406503 FAM159BA6NKW6 160 aa11.83□□□□□ -0.52
PRAME-206ENST00000406503 PROM1O43490 865 aa11.83□□□□□ -0.52
PRAME-206ENST00000406503 FBXO45P0C2W1 286 aa11.83□□□□□ -0.52
PRAME-206ENST00000406503 SLC35E2BP0CK96 405 aa11.83□□□□□ -0.52
PRAME-206ENST00000406503 MTHFD2P13995 350 aa11.83□□□□□ -0.52
PRAME-206ENST00000406503 GABRA1P14867 456 aa11.83□□□□□ -0.52
PRAME-206ENST00000406503 KLK2P20151 261 aa11.83□□□□□ -0.52
PRAME-206ENST00000406503 CEACAM8P31997 349 aaPredicted RBP11.83□□□□□ -0.52
PRAME-206ENST00000406503 SSR2P43308 183 aa11.83□□□□□ -0.52
PRAME-206ENST00000406503 SLC37A1P57057 533 aa11.83□□□□□ -0.52
PRAME-206ENST00000406503 ATP6V0D1P61421 351 aa11.83□□□□□ -0.52
PRAME-206ENST00000406503 HERVK_113P63132 956 aa11.83□□□□□ -0.52
PRAME-206ENST00000406503 ERVK-8P63133 956 aa11.83□□□□□ -0.52
PRAME-206ENST00000406503 CRYZQ08257 329 aaKnown RBP11.83□□□□□ -0.52
PRAME-206ENST00000406503 FOXD4Q12950 439 aaPredicted RBP11.83□□□□□ -0.52
PRAME-206ENST00000406503 SLAMF1Q13291 335 aa11.83□□□□□ -0.52
PRAME-206ENST00000406503 CEBPEQ15744 281 aa11.83□□□□□ -0.52
PRAME-206ENST00000406503 NTRK2Q16620 822 aa11.83□□□□□ -0.52
PRAME-206ENST00000406503 SPRED3Q2MJR0 410 aa11.83□□□□□ -0.52
PRAME-206ENST00000406503 TMEM35AQ53FP2 167 aa11.83□□□□□ -0.52
PRAME-206ENST00000406503 FNDC7Q5VTL7 733 aa11.83□□□□□ -0.52
PRAME-206ENST00000406503 BICRALQ6AI39 1079 aa11.83□□□□□ -0.52
PRAME-206ENST00000406503 OR4C11Q6IEV9 310 aa11.83□□□□□ -0.52
PRAME-206ENST00000406503 MRM1Q6IN84 353 aaKnown RBP11.83□□□□□ -0.52
PRAME-206ENST00000406503 MED27Q6P2C8 311 aa11.83□□□□□ -0.52
PRAME-206ENST00000406503 SLC15A4Q8N697 577 aa11.83□□□□□ -0.52
PRAME-206ENST00000406503 SRFBP1Q8NEF9 429 aaKnown RBP11.83□□□□□ -0.52
PRAME-206ENST00000406503 TNIP2Q8NFZ5 429 aa11.83□□□□□ -0.52
PRAME-206ENST00000406503 NEIL3Q8TAT5 605 aa11.83□□□□□ -0.52
PRAME-206ENST00000406503 SLC22A8Q8TCC7 542 aa11.83□□□□□ -0.52
PRAME-206ENST00000406503 UBTD2Q8WUN7 234 aa11.83□□□□□ -0.52
PRAME-206ENST00000406503 NTNG2Q96CW9 530 aa11.83□□□□□ -0.52
PRAME-206ENST00000406503 ERVK-6Q9BXR3 956 aa11.83□□□□□ -0.52
PRAME-206ENST00000406503 POLDIP3Q9BY77 421 aaKnown RBP11.83□□□□□ -0.52
PRAME-206ENST00000406503 PHACTR1Q9C0D0 580 aa11.83□□□□□ -0.52
PRAME-206ENST00000406503 WWTR1Q9GZV5 400 aa11.83□□□□□ -0.52
PRAME-206ENST00000406503 CLEC4MQ9H2X3 399 aaPredicted RBP11.83□□□□□ -0.52
PRAME-206ENST00000406503 UBQLN3Q9H347 655 aa11.83□□□□□ -0.52
PRAME-206ENST00000406503 GSX1Q9H4S2 264 aaPredicted RBP11.83□□□□□ -0.52
PRAME-206ENST00000406503 ALG9Q9H6U8 611 aa11.83□□□□□ -0.52
PRAME-206ENST00000406503 RPF2Q9H7B2 306 aaKnown RBP11.83□□□□□ -0.52
PRAME-206ENST00000406503 ALKBH4Q9NXW9 302 aa11.83□□□□□ -0.52
PRAME-206ENST00000406503 B4GALT7Q9UBV7 327 aa11.83□□□□□ -0.52
PRAME-206ENST00000406503 CBLCQ9ULV8 474 aa11.83□□□□□ -0.52
PRAME-206ENST00000406503 ERVK-19Q9WJR5 959 aa11.83□□□□□ -0.52
PRAME-206ENST00000406503 PLEKHA6Q9Y2H5 1048 aa11.83□□□□□ -0.52
PRAME-206ENST00000406503 SNX24Q9Y343 169 aa11.83□□□□□ -0.52
PRAME-206ENST00000406503 RAI1Q7Z5J4 1906 aaPredicted RBP11.83□□□□□ -0.52
PRAME-206ENST00000406503 TCRBV9S1A1TA0A576 114 aa11.82□□□□□ -0.52
PRAME-206ENST00000406503 EFCAB8A8MWE9 144 aa11.82□□□□□ -0.52
PRAME-206ENST00000406503 K7EPI3 171 aa11.82□□□□□ -0.52
PRAME-206ENST00000406503 UBXN8O00124 270 aa11.82□□□□□ -0.52
PRAME-206ENST00000406503 SYT5O00445 386 aa11.82□□□□□ -0.52
PRAME-206ENST00000406503 TMPRSS11DO60235 418 aa11.82□□□□□ -0.52
PRAME-206ENST00000406503 TRIM3O75382 744 aaPredicted RBP11.82□□□□□ -0.52
PRAME-206ENST00000406503 FAM155BO75949 473 aa11.82□□□□□ -0.52
PRAME-206ENST00000406503 PCNAP12004 261 aa11.82□□□□□ -0.52
PRAME-206ENST00000406503 ALOX15P16050 662 aaPredicted RBP11.82□□□□□ -0.52
PRAME-206ENST00000406503 STMN1P16949 149 aa11.82□□□□□ -0.52
PRAME-206ENST00000406503 KIR2DL3P43628 341 aa11.82□□□□□ -0.52
PRAME-206ENST00000406503 TRPC1P48995 793 aa11.82□□□□□ -0.52
PRAME-206ENST00000406503 ZNF136P52737 540 aa11.82□□□□□ -0.52
PRAME-206ENST00000406503 SLC12A2P55011 1212 aa11.82□□□□□ -0.52
PRAME-206ENST00000406503 GPX6P59796 221 aa11.82□□□□□ -0.52
PRAME-206ENST00000406503 RAB10P61026 200 aa11.82□□□□□ -0.52
PRAME-206ENST00000406503 KCNJ2P63252 427 aa11.82□□□□□ -0.52
PRAME-206ENST00000406503 HIST2H2ACQ16777 129 aaPredicted RBP11.82□□□□□ -0.52
PRAME-206ENST00000406503 AP5B1Q2VPB7 878 aa11.82□□□□□ -0.52
PRAME-206ENST00000406503 FBXL19-AS1Q494R0 122 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms