RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 TRNT1Q96Q11 434 aaKnown RBP15.46■□□□□ 0.07
COL4A3BP-204ENST00000405807 ADAM2Q99965 735 aa15.46■□□□□ 0.07
COL4A3BP-204ENST00000405807 OR51M1Q9H341 326 aa15.46■□□□□ 0.07
COL4A3BP-204ENST00000405807 RAD18Q9NS91 495 aa15.46■□□□□ 0.07
COL4A3BP-204ENST00000405807 PADI2Q9Y2J8 665 aa15.46■□□□□ 0.07
COL4A3BP-204ENST00000405807 PRSS21Q9Y6M0 314 aa15.46■□□□□ 0.07
COL4A3BP-204ENST00000405807 A0A075B6Q4 140 aa15.45■□□□□ 0.06
COL4A3BP-204ENST00000405807 A0A0G2JPF8 293 aa15.45■□□□□ 0.06
COL4A3BP-204ENST00000405807 HNRNPCL3B7ZW38 293 aa15.45■□□□□ 0.06
COL4A3BP-204ENST00000405807 H3BNC9 293 aa15.45■□□□□ 0.06
COL4A3BP-204ENST00000405807 TNFRSF11BO00300 401 aa15.45■□□□□ 0.06
COL4A3BP-204ENST00000405807 EIF3GO75821 320 aaKnown RBP eCLIP15.45■□□□□ 0.06
COL4A3BP-204ENST00000405807 CCNB2O95067 398 aa15.45■□□□□ 0.06
COL4A3BP-204ENST00000405807 ACSM4P0C7M7 580 aa15.45■□□□□ 0.06
COL4A3BP-204ENST00000405807 HNRNPCL4P0DMR1 293 aa15.45■□□□□ 0.06
COL4A3BP-204ENST00000405807 ACPPP15309 386 aa15.45■□□□□ 0.06
COL4A3BP-204ENST00000405807 GPX4P36969 197 aaPredicted RBP15.45■□□□□ 0.06
COL4A3BP-204ENST00000405807 SLC11A2P49281 568 aa15.45■□□□□ 0.06
COL4A3BP-204ENST00000405807 PGDP52209 483 aa15.45■□□□□ 0.06
COL4A3BP-204ENST00000405807 RPS24P62847 133 aaKnown RBP15.45■□□□□ 0.06
COL4A3BP-204ENST00000405807 IRF3Q14653 427 aa15.45■□□□□ 0.06
COL4A3BP-204ENST00000405807 FAM110CQ1W6H9 321 aa15.45■□□□□ 0.06
COL4A3BP-204ENST00000405807 NCEH1Q6PIU2 408 aa15.45■□□□□ 0.06
COL4A3BP-204ENST00000405807 ZER1Q7Z7L7 766 aa15.45■□□□□ 0.06
COL4A3BP-204ENST00000405807 NLRP8Q86W28 1048 aa15.45■□□□□ 0.06
COL4A3BP-204ENST00000405807 SYNPOQ8N3V7 929 aa15.45■□□□□ 0.06
COL4A3BP-204ENST00000405807 CSGALNACT1Q8TDX6 532 aa15.45■□□□□ 0.06
COL4A3BP-204ENST00000405807 APOLD1Q96LR9 279 aa15.45■□□□□ 0.06
COL4A3BP-204ENST00000405807 KCNS3Q9BQ31 491 aa15.45■□□□□ 0.06
COL4A3BP-204ENST00000405807 ASB8Q9H765 288 aa15.45■□□□□ 0.06
COL4A3BP-204ENST00000405807 C3orf14Q9HBI5 128 aa15.45■□□□□ 0.06
COL4A3BP-204ENST00000405807 DYRK4Q9NR20 520 aa15.45■□□□□ 0.06
COL4A3BP-204ENST00000405807 FLRT1Q9NZU1 646 aa15.45■□□□□ 0.06
COL4A3BP-204ENST00000405807 ASH2LQ9UBL3 628 aa15.45■□□□□ 0.06
COL4A3BP-204ENST00000405807 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.45■□□□□ 0.06
COL4A3BP-204ENST00000405807 A0A0B4J293 547 aa15.45■□□□□ 0.06
COL4A3BP-204ENST00000405807 GFRA2O00451 464 aa15.45■□□□□ 0.06
COL4A3BP-204ENST00000405807 ADAMDEC1O15204 470 aa15.45■□□□□ 0.06
COL4A3BP-204ENST00000405807 CD72P21854 359 aa15.45■□□□□ 0.06
COL4A3BP-204ENST00000405807 CLCNKAP51800 687 aa15.45■□□□□ 0.06
COL4A3BP-204ENST00000405807 ZNF177Q13360 481 aaPredicted RBP15.45■□□□□ 0.06
COL4A3BP-204ENST00000405807 FGL2Q14314 439 aa15.45■□□□□ 0.06
COL4A3BP-204ENST00000405807 MBOAT1Q6ZNC8 495 aa15.45■□□□□ 0.06
COL4A3BP-204ENST00000405807 CA5BP1Q8WTZ4 195 aa15.45■□□□□ 0.06
COL4A3BP-204ENST00000405807 EID2BQ96D98 161 aa15.45■□□□□ 0.06
COL4A3BP-204ENST00000405807 RNF31Q96EP0 1072 aa15.45■□□□□ 0.06
COL4A3BP-204ENST00000405807 GPR137Q96N19 417 aa15.45■□□□□ 0.06
COL4A3BP-204ENST00000405807 POFUT2Q9Y2G5 429 aa15.45■□□□□ 0.06
COL4A3BP-204ENST00000405807 PCDHB9Q9Y5E1 797 aa15.45■□□□□ 0.06
COL4A3BP-204ENST00000405807 AP1M2Q9Y6Q5 423 aa15.45■□□□□ 0.06
COL4A3BP-204ENST00000405807 GPR37O15354 613 aa15.44■□□□□ 0.06
COL4A3BP-204ENST00000405807 AKAP8O43823 692 aaKnown RBP15.44■□□□□ 0.06
COL4A3BP-204ENST00000405807 NBNO60934 754 aa15.44■□□□□ 0.06
COL4A3BP-204ENST00000405807 RFPL3O75679 317 aa15.44■□□□□ 0.06
COL4A3BP-204ENST00000405807 CPSF4O95639 269 aaKnown RBP15.44■□□□□ 0.06
COL4A3BP-204ENST00000405807 ADH1CP00326 375 aa15.44■□□□□ 0.06
COL4A3BP-204ENST00000405807 ANXA8P13928 327 aa15.44■□□□□ 0.06
COL4A3BP-204ENST00000405807 AMD1P17707 334 aa15.44■□□□□ 0.06
COL4A3BP-204ENST00000405807 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.44■□□□□ 0.06
COL4A3BP-204ENST00000405807 GGTA1PQ4G0N0 100 aa15.44■□□□□ 0.06
COL4A3BP-204ENST00000405807 AADACL4Q5VUY2 407 aa15.44■□□□□ 0.06
COL4A3BP-204ENST00000405807 GDF6Q6KF10 455 aaPredicted RBP15.44■□□□□ 0.06
COL4A3BP-204ENST00000405807 NOXRED1Q6NXP6 359 aa15.44■□□□□ 0.06
COL4A3BP-204ENST00000405807 ZNF226Q9NYT6 803 aa15.44■□□□□ 0.06
COL4A3BP-204ENST00000405807 DNAH12Q6ZR08 3092 aa15.44■□□□□ 0.06
COL4A3BP-204ENST00000405807 PRAMEF12O95522 483 aa15.44■□□□□ 0.06
COL4A3BP-204ENST00000405807 EPORP19235 508 aa15.44■□□□□ 0.06
COL4A3BP-204ENST00000405807 TNFSF8P32971 234 aa15.44■□□□□ 0.06
COL4A3BP-204ENST00000405807 PPIGQ13427 754 aaKnown RBP eCLIP15.44■□□□□ 0.061e-6■■■□□ 19
COL4A3BP-204ENST00000405807 BOP1Q14137 746 aaKnown RBP15.44■□□□□ 0.06
COL4A3BP-204ENST00000405807 SLC5A8Q8N695 610 aa15.44■□□□□ 0.06
COL4A3BP-204ENST00000405807 OR10G2Q8NGC3 310 aa15.44■□□□□ 0.06
COL4A3BP-204ENST00000405807 SETD7Q8WTS6 366 aaKnown RBP15.44■□□□□ 0.06
COL4A3BP-204ENST00000405807 HYLS1Q96M11 299 aa15.44■□□□□ 0.06
COL4A3BP-204ENST00000405807 FRMD6Q96NE9 622 aa15.44■□□□□ 0.06
COL4A3BP-204ENST00000405807 DOHHQ9BU89 302 aa15.44■□□□□ 0.06
COL4A3BP-204ENST00000405807 FAM120CQ9NX05 1096 aaKnown RBP15.44■□□□□ 0.06
COL4A3BP-204ENST00000405807 IMPAD1Q9NX62 359 aa15.44■□□□□ 0.06
COL4A3BP-204ENST00000405807 ARL15Q9NXU5 204 aa15.44■□□□□ 0.06
COL4A3BP-204ENST00000405807 NPIPB8E9PQR5 432 aa15.44■□□□□ 0.06
COL4A3BP-204ENST00000405807 DNASE2O00115 360 aaPredicted RBP15.44■□□□□ 0.06
COL4A3BP-204ENST00000405807 ALDH1A1P00352 501 aa15.44■□□□□ 0.06
COL4A3BP-204ENST00000405807 ALPPP05187 535 aa15.44■□□□□ 0.06
COL4A3BP-204ENST00000405807 S100A9P06702 114 aaKnown RBP15.44■□□□□ 0.06
COL4A3BP-204ENST00000405807 SMIM6P0DI80 62 aa15.44■□□□□ 0.06
COL4A3BP-204ENST00000405807 PRG2P13727 222 aa15.44■□□□□ 0.06
COL4A3BP-204ENST00000405807 GABRB1P18505 474 aa15.44■□□□□ 0.06
COL4A3BP-204ENST00000405807 RPIAP49247 311 aa15.44■□□□□ 0.06
COL4A3BP-204ENST00000405807 CRISP3P54108 245 aa15.44■□□□□ 0.06
COL4A3BP-204ENST00000405807 CAP1Q01518 475 aa15.44■□□□□ 0.06
COL4A3BP-204ENST00000405807 MAP2K5Q13163 448 aa15.44■□□□□ 0.06
COL4A3BP-204ENST00000405807 NFATC2Q13469 925 aa15.44■□□□□ 0.06
COL4A3BP-204ENST00000405807 PTCHD3Q3KNS1 767 aa15.44■□□□□ 0.06
COL4A3BP-204ENST00000405807 LYPLAL1Q5VWZ2 237 aa15.44■□□□□ 0.06
COL4A3BP-204ENST00000405807 BHLHB9Q6PI77 547 aa15.44■□□□□ 0.06
COL4A3BP-204ENST00000405807 C19orf48Q6RUI8 117 aa15.44■□□□□ 0.06
COL4A3BP-204ENST00000405807 C16orf54Q6UWD8 224 aa15.44■□□□□ 0.06
COL4A3BP-204ENST00000405807 SYT12Q8IV01 421 aa15.44■□□□□ 0.06
COL4A3BP-204ENST00000405807 GDPD1Q8N9F7 314 aa15.44■□□□□ 0.06
COL4A3BP-204ENST00000405807 IL17RCQ8NAC3 791 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms