RNA–Protein interactions for RNA: ENST00000400053.8

PTPRM-202, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRM, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-202ENST00000400053 SPHARQ15513 63 aa8.52□□□□□ -1.05
PTPRM-202ENST00000400053 DPY19L2P1Q6NXN4 242 aa8.52□□□□□ -1.05
PTPRM-202ENST00000400053 LRRN1Q6UXK5 716 aa8.52□□□□□ -1.05
PTPRM-202ENST00000400053 UBQLNLQ8IYU4 475 aa8.52□□□□□ -1.05
PTPRM-202ENST00000400053 ALDH16A1Q8IZ83 802 aa8.52□□□□□ -1.05
PTPRM-202ENST00000400053 WDSUB1Q8N9V3 476 aa8.52□□□□□ -1.05
PTPRM-202ENST00000400053 OR8J3Q8NGG0 315 aa8.52□□□□□ -1.05
PTPRM-202ENST00000400053 CASTOR1Q8WTX7 329 aa8.52□□□□□ -1.05
PTPRM-202ENST00000400053 GAB3Q8WWW8 586 aa8.52□□□□□ -1.05
PTPRM-202ENST00000400053 BORCS7Q96B45 105 aa8.52□□□□□ -1.05
PTPRM-202ENST00000400053 OR51I1Q9H343 314 aa8.52□□□□□ -1.05
PTPRM-202ENST00000400053 ACTL8Q9H568 366 aa8.52□□□□□ -1.05
PTPRM-202ENST00000400053 MEAF6Q9HAF1 191 aa8.52□□□□□ -1.05
PTPRM-202ENST00000400053 SRRDQ9UH36 339 aa8.52□□□□□ -1.05
PTPRM-202ENST00000400053 DNAJC15Q9Y5T4 150 aa8.52□□□□□ -1.05
PTPRM-202ENST00000400053 ADAMTS7Q9UKP4 1686 aa8.51□□□□□ -1.05
PTPRM-202ENST00000400053 A0A1W2PPK0 400 aa8.51□□□□□ -1.05
PTPRM-202ENST00000400053 AGAP5A6NIR3 686 aa8.51□□□□□ -1.05
PTPRM-202ENST00000400053 GNRHRP30968 328 aa8.51□□□□□ -1.05
PTPRM-202ENST00000400053 RAB5BP61020 215 aa8.51□□□□□ -1.05
PTPRM-202ENST00000400053 FAM189BP81408 668 aa8.51□□□□□ -1.05
PTPRM-202ENST00000400053 SOX4Q06945 474 aaPredicted RBP8.51□□□□□ -1.05
PTPRM-202ENST00000400053 SCAPQ12770 1279 aa8.51□□□□□ -1.05
PTPRM-202ENST00000400053 PRAMEF14Q5SWL7 426 aa8.51□□□□□ -1.05
PTPRM-202ENST00000400053 PRAMEF13Q5VWM6 474 aa8.51□□□□□ -1.05
PTPRM-202ENST00000400053 MAMDC4Q6UXC1 1216 aa8.51□□□□□ -1.05
PTPRM-202ENST00000400053 ZNF367Q7RTV3 350 aa8.51□□□□□ -1.05
PTPRM-202ENST00000400053 PRSS58Q8IYP2 241 aa8.51□□□□□ -1.05
PTPRM-202ENST00000400053 MFSD2AQ8NA29 543 aa8.51□□□□□ -1.05
PTPRM-202ENST00000400053 OR5T2Q8NGG2 359 aa8.51□□□□□ -1.05
PTPRM-202ENST00000400053 SHKBP1Q8TBC3 707 aa8.51□□□□□ -1.05
PTPRM-202ENST00000400053 OSTF1Q92882 214 aa8.51□□□□□ -1.05
PTPRM-202ENST00000400053 MOAP1Q96BY2 351 aa8.51□□□□□ -1.05
PTPRM-202ENST00000400053 TCEAL4Q96EI5 215 aa8.51□□□□□ -1.05
PTPRM-202ENST00000400053 SHDQ96IW2 340 aa8.51□□□□□ -1.05
PTPRM-202ENST00000400053 MYRFLQ96LU7 910 aa8.51□□□□□ -1.05
PTPRM-202ENST00000400053 DPH2Q9BQC3 489 aaPredicted RBP8.51□□□□□ -1.05
PTPRM-202ENST00000400053 PBDC1Q9BVG4 233 aa8.51□□□□□ -1.05
PTPRM-202ENST00000400053 RAB9BQ9NP90 201 aa8.51□□□□□ -1.05
PTPRM-202ENST00000400053 AIG1Q9NVV5 245 aa8.51□□□□□ -1.05
PTPRM-202ENST00000400053 MYH14Q7Z406 1995 aaKnown RBP8.51□□□□□ -1.05
PTPRM-202ENST00000400053 SLC31A1O15431 190 aa8.51□□□□□ -1.05
PTPRM-202ENST00000400053 HPRP00739 348 aa8.51□□□□□ -1.05
PTPRM-202ENST00000400053 EPOP01588 193 aa8.51□□□□□ -1.05
PTPRM-202ENST00000400053 MSR1P21757 451 aa8.51□□□□□ -1.05
PTPRM-202ENST00000400053 ADH6P28332 368 aa8.51□□□□□ -1.05
PTPRM-202ENST00000400053 AGTR1P30556 359 aa8.51□□□□□ -1.05
PTPRM-202ENST00000400053 SLC5A2P31639 672 aa8.51□□□□□ -1.05
PTPRM-202ENST00000400053 CSKP41240 450 aa8.51□□□□□ -1.05
PTPRM-202ENST00000400053 ARRB1P49407 418 aaPredicted RBP8.51□□□□□ -1.05
PTPRM-202ENST00000400053 PRMT2P55345 433 aa8.51□□□□□ -1.05
PTPRM-202ENST00000400053 FGFBP1Q14512 234 aa8.51□□□□□ -1.05
PTPRM-202ENST00000400053 SLC36A3Q495N2 470 aa8.51□□□□□ -1.05
PTPRM-202ENST00000400053 PNPLA1Q8N8W4 532 aa8.51□□□□□ -1.05
PTPRM-202ENST00000400053 ZFP41Q8N8Y5 198 aa8.51□□□□□ -1.05
PTPRM-202ENST00000400053 OR52E4Q8NGH9 312 aa8.51□□□□□ -1.05
PTPRM-202ENST00000400053 KCNK13Q9HB14 408 aa8.51□□□□□ -1.05
PTPRM-202ENST00000400053 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.51□□□□□ -1.05
PTPRM-202ENST00000400053 TMEM14AQ9Y6G1 99 aa8.51□□□□□ -1.05
PTPRM-202ENST00000400053 MYO10Q9HD67 2058 aa8.51□□□□□ -1.05
PTPRM-202ENST00000400053 A8MU76 341 aa8.51□□□□□ -1.05
PTPRM-202ENST00000400053 EIF1AYO14602 144 aaKnown RBP8.51□□□□□ -1.05
PTPRM-202ENST00000400053 SSX4O60224 188 aa8.51□□□□□ -1.05
PTPRM-202ENST00000400053 BEST1O76090 585 aa8.51□□□□□ -1.05
PTPRM-202ENST00000400053 SYNGR4O95473 234 aa8.51□□□□□ -1.05
PTPRM-202ENST00000400053 TFAP2AP05549 437 aa8.51□□□□□ -1.05
PTPRM-202ENST00000400053 ZNF14P17017 642 aaPredicted RBP8.51□□□□□ -1.05
PTPRM-202ENST00000400053 S1PR1P21453 382 aa8.51□□□□□ -1.05
PTPRM-202ENST00000400053 CD40LGP29965 261 aa8.51□□□□□ -1.05
PTPRM-202ENST00000400053 HOXA11P31270 313 aaPredicted RBP8.51□□□□□ -1.05
PTPRM-202ENST00000400053 EIF1AXP47813 144 aaKnown RBP8.51□□□□□ -1.05
PTPRM-202ENST00000400053 CASP6P55212 293 aa8.51□□□□□ -1.05
PTPRM-202ENST00000400053 ADGRF1Q5T601 910 aa8.51□□□□□ -1.05
PTPRM-202ENST00000400053 KCTD9Q7L273 389 aa8.51□□□□□ -1.05
PTPRM-202ENST00000400053 THOC6Q86W42 341 aaKnown RBP8.51□□□□□ -1.05
PTPRM-202ENST00000400053 LAS2Q8IYD9 372 aa8.51□□□□□ -1.05
PTPRM-202ENST00000400053 ZNF486Q96H40 463 aaPredicted RBP8.51□□□□□ -1.05
PTPRM-202ENST00000400053 ARL6Q9H0F7 186 aa8.51□□□□□ -1.05
PTPRM-202ENST00000400053 CPNE5Q9HCH3 593 aa8.51□□□□□ -1.05
PTPRM-202ENST00000400053 SLC2A4RGQ9NR83 387 aa8.51□□□□□ -1.05
PTPRM-202ENST00000400053 ABCB8Q9NUT2 735 aa8.51□□□□□ -1.05
PTPRM-202ENST00000400053 GPR83Q9NYM4 423 aa8.51□□□□□ -1.05
PTPRM-202ENST00000400053 KLRF1Q9NZS2 232 aa8.51□□□□□ -1.05
PTPRM-202ENST00000400053 PADI2Q9Y2J8 665 aa8.51□□□□□ -1.05
PTPRM-202ENST00000400053 DIRAS3O95661 229 aa8.51□□□□□ -1.05
PTPRM-202ENST00000400053 DHRS4L1P0CG22 281 aa8.51□□□□□ -1.05
PTPRM-202ENST00000400053 MLLT3P42568 568 aaPredicted RBP8.51□□□□□ -1.05
PTPRM-202ENST00000400053 MAP1BP46821 2468 aaKnown RBP8.51□□□□□ -1.05
PTPRM-202ENST00000400053 RPS13P62277 151 aaKnown RBP8.51□□□□□ -1.05
PTPRM-202ENST00000400053 FGL1Q08830 312 aa8.51□□□□□ -1.05
PTPRM-202ENST00000400053 NIPAL4Q0D2K0 466 aa8.51□□□□□ -1.05
PTPRM-202ENST00000400053 SERINC3Q13530 473 aa8.51□□□□□ -1.05
PTPRM-202ENST00000400053 ATG9BQ674R7 924 aa8.51□□□□□ -1.05
PTPRM-202ENST00000400053 RPL13AP3Q6NVV1 102 aa8.51□□□□□ -1.05
PTPRM-202ENST00000400053 PRSS55Q6UWB4 352 aaPredicted RBP8.51□□□□□ -1.05
PTPRM-202ENST00000400053 TMPPEQ6ZT21 453 aa8.51□□□□□ -1.05
PTPRM-202ENST00000400053 SLC16A9Q7RTY1 509 aa8.51□□□□□ -1.05
PTPRM-202ENST00000400053 ZSWIM9Q86XI8 627 aa8.51□□□□□ -1.05
PTPRM-202ENST00000400053 GID4Q8IVV7 300 aa8.51□□□□□ -1.05
PTPRM-202ENST00000400053 LNX2Q8N448 690 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms