RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 ZNF763Q0D2J5 394 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 SGCGQ13326 291 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 SPIN4Q56A73 249 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 CEACAM20Q6UY09 585 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 USP30Q70CQ3 517 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 GHDCQ8N2G8 530 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 METTL4Q8N3J2 472 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 OR10G6Q8NH81 332 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 IL22RA2Q969J5 263 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 TBC1D14Q9P2M4 693 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 COMMD3Q9UBI1 195 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 PSORS1C1Q9UIG5 152 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 GTF2A1LQ9UNN4 478 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 HSPE1-MOB4S4R3N1 261 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 ZNF831Q5JPB2 1677 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 MYO5AQ9Y4I1 1855 aaKnown RBP4.7□□□□□ -1.66
SMAD4-202ENST00000398417 BAZ2AQ9UIF9 1905 aaKnown RBP4.7□□□□□ -1.66
SMAD4-202ENST00000398417 LAMB1P07942 1786 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 CIB4A0PJX0 185 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 HNRNPCL3B7ZW38 293 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 NME6O75414 186 aaPredicted RBP4.7□□□□□ -1.66
SMAD4-202ENST00000398417 HNRNPCL4P0DMR1 293 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 ADH5P11766 374 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 GGT2P36268 569 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 RPL3P39023 403 aaKnown RBP4.7□□□□□ -1.66
SMAD4-202ENST00000398417 GBX1Q14549 363 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 GTF2IRD2BQ6EKJ0 949 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 FAM71E1Q6IPT2 247 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 DPPA4Q7L190 304 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 GTF2IRD2Q86UP8 949 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 KAT2AQ92830 837 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 AP1S3Q96PC3 154 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 CTRCQ99895 268 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 ZBTB20Q9HC78 741 aaPredicted RBP4.7□□□□□ -1.66
SMAD4-202ENST00000398417 MCCC2Q9HCC0 563 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 ZNF221Q9UK13 617 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 SLC6A14Q9UN76 642 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 PCDHGA2Q9Y5H1 932 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 ZGRF1Q86YA3 2104 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 WASHC1A8K0Z3 465 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 M0R3H8 397 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 SLC16A6O15403 523 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 PI15O43692 258 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 GASTP01350 101 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 CEBPBP17676 345 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 CRISP3P54108 245 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 WDR5P61964 334 aaKnown RBP4.7□□□□□ -1.66
SMAD4-202ENST00000398417 RAE1P78406 368 aaKnown RBP4.7□□□□□ -1.66
SMAD4-202ENST00000398417 VEZF1Q14119 521 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 CRTC2Q53ET0 693 aaPredicted RBP4.7□□□□□ -1.66
SMAD4-202ENST00000398417 ZNF805Q5CZA5 627 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 BRAT1Q6PJG6 821 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 WASH2PQ6VEQ5 465 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 CHMP1BQ7LBR1 199 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 ZNF367Q7RTV3 350 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 PRSS48Q7RTY5 328 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 LSRQ86X29 649 aaPredicted RBP4.7□□□□□ -1.66
SMAD4-202ENST00000398417 VN1R2Q8NFZ6 395 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 WDR20Q8TBZ3 569 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 SLC9A6Q92581 669 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 TMEM80Q96HE8 168 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 DIRAS2Q96HU8 199 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 ZSWIM3Q96MP5 696 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 Q96MT0 163 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 MGLLQ99685 303 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 PRR14Q9BWN1 585 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 ASPNQ9BXN1 380 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 ERVK13-1Q9NX77 482 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 SEC14L3Q9UDX4 400 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 RANBP2P49792 3224 aaKnown RBP4.7□□□□□ -1.66
SMAD4-202ENST00000398417 OR2A25A4D2G3 310 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 FRS3O43559 492 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 TMCC2O75069 709 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 JRKO75564 520 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 EIF2S1P05198 315 aaKnown RBP4.7□□□□□ -1.66
SMAD4-202ENST00000398417 H1F0P07305 194 aaKnown RBP4.7□□□□□ -1.66
SMAD4-202ENST00000398417 JUNDP17535 347 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 GPX2P18283 190 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 CCT3P49368 545 aaKnown RBP4.7□□□□□ -1.66
SMAD4-202ENST00000398417 CAMK1Q14012 370 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 SPANXN2Q5MJ10 180 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 ALKBH2Q6NS38 261 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 TMIGD1Q6UXZ0 262 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 DPY19L4Q7Z388 723 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 TMEM150AQ86TG1 271 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 UCN3Q969E3 161 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 RELTQ969Z4 430 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 FKBP10Q96AY3 582 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 TEFMQ96QE5 360 aaKnown RBP4.7□□□□□ -1.66
SMAD4-202ENST00000398417 RACGAP1Q9H0H5 632 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 CXorf36Q9H7Y0 433 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 PLEKHM1Q9Y4G2 1056 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 IRAK3Q9Y616 596 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 MYO7BQ6PIF6 2116 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 GFYI3L273 518 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 SERPINB7O75635 380 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 OR3A3P47888 321 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 OR3A2P47893 321 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 CLCNKAP51800 687 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 ID2Q02363 134 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms