RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 A0A1W2PP18 115 aa10.86□□□□□ -0.67
TTC28-201ENST00000397906 NUAK1O60285 661 aa10.86□□□□□ -0.67
TTC28-201ENST00000397906 ZNF28P17035 718 aa10.86□□□□□ -0.67
TTC28-201ENST00000397906 EPHA4P54764 986 aa10.86□□□□□ -0.67
TTC28-201ENST00000397906 DAG1Q14118 895 aa10.86□□□□□ -0.67
TTC28-201ENST00000397906 EMC10Q5UCC4 262 aa10.86□□□□□ -0.67
TTC28-201ENST00000397906 PITX2Q99697 317 aa10.86□□□□□ -0.67
TTC28-201ENST00000397906 TMEM59LQ9UK28 342 aa10.86□□□□□ -0.67
TTC28-201ENST00000397906 GGT3PA6NGU5 568 aa10.86□□□□□ -0.67
TTC28-201ENST00000397906 ACOX3O15254 700 aa10.86□□□□□ -0.67
TTC28-201ENST00000397906 SLC2A2P11168 524 aaPredicted RBP10.86□□□□□ -0.67
TTC28-201ENST00000397906 WDR4P57081 412 aaKnown RBP10.86□□□□□ -0.67
TTC28-201ENST00000397906 ST3GAL4Q11206 333 aa10.86□□□□□ -0.67
TTC28-201ENST00000397906 LRRC26Q2I0M4 334 aa10.86□□□□□ -0.67
TTC28-201ENST00000397906 OR8H1Q8NGG4 311 aa10.86□□□□□ -0.67
TTC28-201ENST00000397906 DDIT4LQ96D03 193 aa10.86□□□□□ -0.67
TTC28-201ENST00000397906 APOOQ9BUR5 198 aa10.86□□□□□ -0.67
TTC28-201ENST00000397906 TMEM109Q9BVC6 243 aa10.86□□□□□ -0.67
TTC28-201ENST00000397906 KAT8Q9H7Z6 458 aaKnown RBP10.86□□□□□ -0.67
TTC28-201ENST00000397906 OPN1LWP04000 364 aa10.86□□□□□ -0.67
TTC28-201ENST00000397906 ALDH16A1Q8IZ83 802 aa10.86□□□□□ -0.67
TTC28-201ENST00000397906 INO80EQ8NBZ0 244 aaPredicted RBP10.86□□□□□ -0.67
TTC28-201ENST00000397906 BIRC7Q96CA5 298 aa10.86□□□□□ -0.67
TTC28-201ENST00000397906 ZNF382Q96SR6 550 aa10.86□□□□□ -0.67
TTC28-201ENST00000397906 LPAR4Q99677 370 aa10.86□□□□□ -0.67
TTC28-201ENST00000397906 NAA11Q9BSU3 229 aaPredicted RBP10.86□□□□□ -0.67
TTC28-201ENST00000397906 GDE1Q9NZC3 331 aa10.86□□□□□ -0.67
TTC28-201ENST00000397906 MALLQ13021 153 aa10.86□□□□□ -0.67
TTC28-201ENST00000397906 MSANTD1Q6ZTZ1 278 aa10.86□□□□□ -0.67
TTC28-201ENST00000397906 PCDHGB2Q9Y5G2 931 aa10.86□□□□□ -0.67
TTC28-201ENST00000397906 S1PR4O95977 384 aa10.86□□□□□ -0.67
TTC28-201ENST00000397906 MPC1LP0DKB6 136 aa10.86□□□□□ -0.67
TTC28-201ENST00000397906 EGFLAMQ63HQ2 1017 aa10.86□□□□□ -0.67
TTC28-201ENST00000397906 PTCRAQ6ISU1 281 aaPredicted RBP10.86□□□□□ -0.67
TTC28-201ENST00000397906 PAMR1Q6UXH9 720 aa10.86□□□□□ -0.67
TTC28-201ENST00000397906 NPWQ8N729 165 aa10.86□□□□□ -0.67
TTC28-201ENST00000397906 LRRC15Q8TF66 581 aa10.86□□□□□ -0.67
TTC28-201ENST00000397906 PGAM5Q96HS1 289 aa10.86□□□□□ -0.67
TTC28-201ENST00000397906 ULBP3Q9BZM4 244 aa10.86□□□□□ -0.67
TTC28-201ENST00000397906 PRKCAP17252 672 aa10.85□□□□□ -0.67
TTC28-201ENST00000397906 TIA1P31483 386 aaKnown RBP eCLIP10.85□□□□□ -0.67
TTC28-201ENST00000397906 TUBB3Q13509 450 aa10.85□□□□□ -0.67
TTC28-201ENST00000397906 FBXO43Q4G163 708 aa10.85□□□□□ -0.67
TTC28-201ENST00000397906 CCDC36Q8IYA8 594 aa10.85□□□□□ -0.67
TTC28-201ENST00000397906 TOR1AIP2Q8NFQ8 470 aa10.85□□□□□ -0.67
TTC28-201ENST00000397906 STRA6Q9BX79 667 aa10.85□□□□□ -0.67
TTC28-201ENST00000397906 PAK6Q9NQU5 681 aaPredicted RBP10.85□□□□□ -0.67
TTC28-201ENST00000397906 BCKDHAP12694 445 aa10.85□□□□□ -0.67
TTC28-201ENST00000397906 S1PR1P21453 382 aa10.85□□□□□ -0.67
TTC28-201ENST00000397906 ATE1O95260 518 aa10.85□□□□□ -0.67
TTC28-201ENST00000397906 UQCRC1P31930 480 aa10.85□□□□□ -0.67
TTC28-201ENST00000397906 EEF1A2Q05639 463 aaKnown RBP10.85□□□□□ -0.67
TTC28-201ENST00000397906 DOC2AQ14183 400 aa10.85□□□□□ -0.67
TTC28-201ENST00000397906 HRH2P25021 359 aa10.85□□□□□ -0.67
TTC28-201ENST00000397906 OR4D1Q15615 310 aa10.85□□□□□ -0.67
TTC28-201ENST00000397906 LARP4Q71RC2 724 aaKnown RBP eCLIP10.85□□□□□ -0.67
TTC28-201ENST00000397906 PPP1R14BQ96C90 147 aa10.85□□□□□ -0.67
TTC28-201ENST00000397906 NPIPB15A6NHN6 443 aaPredicted RBP10.85□□□□□ -0.67
TTC28-201ENST00000397906 SMAD6O43541 496 aaKnown RBP10.85□□□□□ -0.67
TTC28-201ENST00000397906 IFNA21P01568 189 aa10.85□□□□□ -0.67
TTC28-201ENST00000397906 CDK10Q15131 360 aa10.85□□□□□ -0.67
TTC28-201ENST00000397906 IRF4Q15306 451 aa10.85□□□□□ -0.67
TTC28-201ENST00000397906 ZNF765Q7L2R6 523 aa10.85□□□□□ -0.67
TTC28-201ENST00000397906 VASH1Q7L8A9 365 aaPredicted RBP10.85□□□□□ -0.67
TTC28-201ENST00000397906 ZFYVE21Q9BQ24 234 aa10.85□□□□□ -0.67
TTC28-201ENST00000397906 C1orf21Q9H246 121 aa10.85□□□□□ -0.67
TTC28-201ENST00000397906 NUMBLQ9Y6R0 609 aa10.85□□□□□ -0.67
TTC28-201ENST00000397906 MYH7P12883 1935 aa10.85□□□□□ -0.67
TTC28-201ENST00000397906 HBQ1P09105 142 aa10.85□□□□□ -0.67
TTC28-201ENST00000397906 GRB7Q14451 532 aa10.85□□□□□ -0.67
TTC28-201ENST00000397906 OR5P2Q8WZ92 322 aa10.85□□□□□ -0.67
TTC28-201ENST00000397906 EPOP01588 193 aa10.85□□□□□ -0.67
TTC28-201ENST00000397906 GLP1RP43220 463 aa10.85□□□□□ -0.67
TTC28-201ENST00000397906 SLC18A1P54219 525 aa10.85□□□□□ -0.67
TTC28-201ENST00000397906 RCAN2Q14206 197 aa10.85□□□□□ -0.67
TTC28-201ENST00000397906 LIPIQ6XZB0 460 aa10.85□□□□□ -0.67
TTC28-201ENST00000397906 HORMAD2Q8N7B1 307 aa10.85□□□□□ -0.67
TTC28-201ENST00000397906 BBS10Q8TAM1 723 aa10.85□□□□□ -0.67
TTC28-201ENST00000397906 H3BUI4 141 aa10.85□□□□□ -0.67
TTC28-201ENST00000397906 ONECUT3O60422 494 aaPredicted RBP10.85□□□□□ -0.67
TTC28-201ENST00000397906 RPS26P11Q5JNZ5 115 aaPredicted RBP10.85□□□□□ -0.67
TTC28-201ENST00000397906 SLITRK4Q8IW52 837 aa10.85□□□□□ -0.67
TTC28-201ENST00000397906 TOMM5Q8N4H5 51 aa10.85□□□□□ -0.67
TTC28-201ENST00000397906 TMEM80Q96HE8 168 aa10.85□□□□□ -0.67
TTC28-201ENST00000397906 SMCO3A2RU48 225 aa10.85□□□□□ -0.67
TTC28-201ENST00000397906 NIPAL4Q0D2K0 466 aa10.85□□□□□ -0.67
TTC28-201ENST00000397906 FCRLBQ6BAA4 426 aa10.85□□□□□ -0.67
TTC28-201ENST00000397906 ZNF784Q8NCA9 323 aaPredicted RBP10.85□□□□□ -0.67
TTC28-201ENST00000397906 STOX2Q9P2F5 926 aaPredicted RBP10.85□□□□□ -0.67
TTC28-201ENST00000397906 UNC119BA6NIH7 251 aa10.84□□□□□ -0.67
TTC28-201ENST00000397906 ENTPD6O75354 484 aa10.84□□□□□ -0.67
TTC28-201ENST00000397906 CD6P30203 668 aa10.84□□□□□ -0.67
TTC28-201ENST00000397906 NPRL3Q12980 569 aa10.84□□□□□ -0.67
TTC28-201ENST00000397906 MEP1AQ16819 746 aa10.84□□□□□ -0.67
TTC28-201ENST00000397906 PRR18Q8N4B5 295 aa10.84□□□□□ -0.67
TTC28-201ENST00000397906 TMPRSS11EQ9UL52 423 aa10.84□□□□□ -0.67
TTC28-201ENST00000397906 MAZP56270 477 aaKnown RBP10.84□□□□□ -0.67
TTC28-201ENST00000397906 TYSND1Q2T9J0 566 aa10.84□□□□□ -0.67
TTC28-201ENST00000397906 OR8H3Q8N146 312 aa10.84□□□□□ -0.67
TTC28-201ENST00000397906 SOX17Q9H6I2 414 aaPredicted RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms