RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 RUNX1T1Q06455 604 aa7.85□□□□□ -1.15
PTPRD-204ENST00000397606 ZNF595Q8IYB9 648 aa7.85□□□□□ -1.15
PTPRD-204ENST00000397606 CBR4Q8N4T8 237 aa7.85□□□□□ -1.15
PTPRD-204ENST00000397606 FRMD1Q8N878 549 aa7.85□□□□□ -1.15
PTPRD-204ENST00000397606 CDRT4Q8N9R6 151 aa7.85□□□□□ -1.15
PTPRD-204ENST00000397606 ATP6V1C2Q8NEY4 427 aa7.85□□□□□ -1.15
PTPRD-204ENST00000397606 OR5K1Q8NHB7 308 aa7.85□□□□□ -1.15
PTPRD-204ENST00000397606 MS4A4EQ96PG1 132 aa7.85□□□□□ -1.15
PTPRD-204ENST00000397606 TRIM4Q9C037 500 aa7.85□□□□□ -1.15
PTPRD-204ENST00000397606 C14orf105Q9NVL8 296 aa7.85□□□□□ -1.15
PTPRD-204ENST00000397606 SMPD3Q9NY59 655 aaPredicted RBP7.85□□□□□ -1.15
PTPRD-204ENST00000397606 EHD3Q9NZN3 535 aa7.85□□□□□ -1.15
PTPRD-204ENST00000397606 NDUFA13Q9P0J0 144 aa7.85□□□□□ -1.15
PTPRD-204ENST00000397606 EBF1Q9UH73 591 aa7.85□□□□□ -1.15
PTPRD-204ENST00000397606 SNX11Q9Y5W9 270 aa7.85□□□□□ -1.15
PTPRD-204ENST00000397606 CSNK1G3Q9Y6M4 447 aa7.85□□□□□ -1.15
PTPRD-204ENST00000397606 MYL12BO14950 172 aa7.85□□□□□ -1.15
PTPRD-204ENST00000397606 MAN1A2O60476 641 aa7.85□□□□□ -1.15
PTPRD-204ENST00000397606 GPR75O95800 540 aa7.85□□□□□ -1.15
PTPRD-204ENST00000397606 C9P02748 559 aa7.85□□□□□ -1.15
PTPRD-204ENST00000397606 H1F0P07305 194 aaKnown RBP7.85□□□□□ -1.15
PTPRD-204ENST00000397606 POU3F3P20264 500 aaPredicted RBP7.85□□□□□ -1.15
PTPRD-204ENST00000397606 CXCR1P25024 350 aa7.85□□□□□ -1.15
PTPRD-204ENST00000397606 CTSKP43235 329 aa7.85□□□□□ -1.15
PTPRD-204ENST00000397606 GPR3P46089 330 aa7.85□□□□□ -1.15
PTPRD-204ENST00000397606 ST3GAL3Q11203 375 aa7.85□□□□□ -1.15
PTPRD-204ENST00000397606 FGL2Q14314 439 aa7.85□□□□□ -1.15
PTPRD-204ENST00000397606 GPR141Q7Z602 305 aa7.85□□□□□ -1.15
PTPRD-204ENST00000397606 VWA5B2Q8N398 1253 aa7.85□□□□□ -1.15
PTPRD-204ENST00000397606 HSH2DQ96JZ2 352 aa7.85□□□□□ -1.15
PTPRD-204ENST00000397606 ACTRT3Q9BYD9 372 aa7.85□□□□□ -1.15
PTPRD-204ENST00000397606 PCDHGA4Q9Y5G9 962 aa7.85□□□□□ -1.15
PTPRD-204ENST00000397606 SIP14410 1827 aa7.85□□□□□ -1.15
PTPRD-204ENST00000397606 MYO16Q9Y6X6 1858 aa7.85□□□□□ -1.15
PTPRD-204ENST00000397606 MYOCOSA0A1B0GUC4 107 aa7.85□□□□□ -1.15
PTPRD-204ENST00000397606 GABRR3A8MPY1 467 aa7.85□□□□□ -1.15
PTPRD-204ENST00000397606 AGAP14A8MT82 685 aa7.85□□□□□ -1.15
PTPRD-204ENST00000397606 FLRT2O43155 660 aa7.85□□□□□ -1.15
PTPRD-204ENST00000397606 STX11O75558 287 aa7.85□□□□□ -1.15
PTPRD-204ENST00000397606 LINC00271P0C7V0 271 aa7.85□□□□□ -1.15
PTPRD-204ENST00000397606 THRBP10828 461 aa7.85□□□□□ -1.15
PTPRD-204ENST00000397606 CCNA2P20248 432 aa7.85□□□□□ -1.15
PTPRD-204ENST00000397606 OTX2P32243 289 aa7.85□□□□□ -1.15
PTPRD-204ENST00000397606 KDELR2P33947 212 aa7.85□□□□□ -1.15
PTPRD-204ENST00000397606 EPHA4P54764 986 aa7.85□□□□□ -1.15
PTPRD-204ENST00000397606 RAB38P57729 211 aa7.85□□□□□ -1.15
PTPRD-204ENST00000397606 C6orf132Q5T0Z8 1188 aa7.85□□□□□ -1.15
PTPRD-204ENST00000397606 LPCAT4Q643R3 524 aa7.85□□□□□ -1.15
PTPRD-204ENST00000397606 OR2T5Q6IEZ7 315 aa7.85□□□□□ -1.15
PTPRD-204ENST00000397606 Q6ZSR9 355 aa7.85□□□□□ -1.15
PTPRD-204ENST00000397606 SH2D5Q6ZV89 423 aa7.85□□□□□ -1.15
PTPRD-204ENST00000397606 ZNF550Q7Z398 422 aa7.85□□□□□ -1.15
PTPRD-204ENST00000397606 RNF175Q8N4F7 328 aa7.85□□□□□ -1.15
PTPRD-204ENST00000397606 OR2T29Q8NH02 315 aa7.85□□□□□ -1.15
PTPRD-204ENST00000397606 IFI44Q8TCB0 444 aa7.85□□□□□ -1.15
PTPRD-204ENST00000397606 STON2Q8WXE9 905 aa7.85□□□□□ -1.15
PTPRD-204ENST00000397606 DEPDC7Q96QD5 511 aa7.85□□□□□ -1.15
PTPRD-204ENST00000397606 OR6C1Q96RD1 312 aa7.85□□□□□ -1.15
PTPRD-204ENST00000397606 EDEM2Q9BV94 578 aa7.85□□□□□ -1.15
PTPRD-204ENST00000397606 SLC6A16Q9GZN6 736 aa7.85□□□□□ -1.15
PTPRD-204ENST00000397606 ACSS1Q9NUB1 689 aaPredicted RBP7.85□□□□□ -1.15
PTPRD-204ENST00000397606 USP36Q9P275 1121 aaKnown RBP7.85□□□□□ -1.15
PTPRD-204ENST00000397606 A0A087WXM4 84 aa7.84□□□□□ -1.15
PTPRD-204ENST00000397606 CCDC163A0A0D9SF12 145 aa7.84□□□□□ -1.15
PTPRD-204ENST00000397606 XKRYO14609 159 aa7.84□□□□□ -1.15
PTPRD-204ENST00000397606 PCDHGA12O60330 932 aa7.84□□□□□ -1.15
PTPRD-204ENST00000397606 BCL6P41182 706 aa7.84□□□□□ -1.15
PTPRD-204ENST00000397606 TMEM214Q6NUQ4 689 aaKnown RBP7.84□□□□□ -1.15
PTPRD-204ENST00000397606 OR52E4Q8NGH9 312 aa7.84□□□□□ -1.15
PTPRD-204ENST00000397606 TMCO6Q96DC7 493 aa7.84□□□□□ -1.15
PTPRD-204ENST00000397606 EPYCQ99645 322 aa7.84□□□□□ -1.15
PTPRD-204ENST00000397606 CLMPQ9H6B4 373 aa7.84□□□□□ -1.15
PTPRD-204ENST00000397606 PLAC1Q9HBJ0 212 aa7.84□□□□□ -1.15
PTPRD-204ENST00000397606 NECTIN3Q9NQS3 549 aa7.84□□□□□ -1.15
PTPRD-204ENST00000397606 CTPS2Q9NRF8 586 aa7.84□□□□□ -1.15
PTPRD-204ENST00000397606 SPHK1Q9NYA1 384 aa7.84□□□□□ -1.15
PTPRD-204ENST00000397606 NLGN3Q9NZ94 848 aa7.84□□□□□ -1.15
PTPRD-204ENST00000397606 ACSL6Q9UKU0 697 aa7.84□□□□□ -1.15
PTPRD-204ENST00000397606 AP4B1Q9Y6B7 739 aa7.84□□□□□ -1.15
PTPRD-204ENST00000397606 ARHGAP33O14559 1287 aa7.84□□□□□ -1.15
PTPRD-204ENST00000397606 TPST2O60704 377 aa7.84□□□□□ -1.15
PTPRD-204ENST00000397606 DNAJA1P31689 397 aaKnown RBP7.84□□□□□ -1.15
PTPRD-204ENST00000397606 HOXD12P35452 270 aa7.84□□□□□ -1.15
PTPRD-204ENST00000397606 MC1RQ01726 317 aa7.84□□□□□ -1.15
PTPRD-204ENST00000397606 YOD1Q5VVQ6 348 aaPredicted RBP7.84□□□□□ -1.15
PTPRD-204ENST00000397606 CGB2Q6NT52 195 aa7.84□□□□□ -1.15
PTPRD-204ENST00000397606 CDC73Q6P1J9 531 aa7.84□□□□□ -1.15
PTPRD-204ENST00000397606 PTCHD4Q6ZW05 846 aa7.84□□□□□ -1.15
PTPRD-204ENST00000397606 FAM98AQ8NCA5 519 aaKnown RBP7.84□□□□□ -1.15
PTPRD-204ENST00000397606 OR5M3Q8NGP4 307 aa7.84□□□□□ -1.15
PTPRD-204ENST00000397606 PROKR1Q8TCW9 393 aa7.84□□□□□ -1.15
PTPRD-204ENST00000397606 GPBAR1Q8TDU6 330 aa7.84□□□□□ -1.15
PTPRD-204ENST00000397606 PRR11Q96HE9 360 aaPredicted RBP7.84□□□□□ -1.15
PTPRD-204ENST00000397606 EGLN2Q96KS0 407 aa7.84□□□□□ -1.15
PTPRD-204ENST00000397606 ULBP3Q9BZM4 244 aa7.84□□□□□ -1.15
PTPRD-204ENST00000397606 EBF2Q9HAK2 575 aa7.84□□□□□ -1.15
PTPRD-204ENST00000397606 NXT1Q9UKK6 140 aaKnown RBP7.84□□□□□ -1.15
PTPRD-204ENST00000397606 FBXO4Q9UKT5 387 aa7.84□□□□□ -1.15
PTPRD-204ENST00000397606 PTRH2Q9Y3E5 179 aaKnown RBP7.84□□□□□ -1.15
PTPRD-204ENST00000397606 PCDHB14Q9Y5E9 798 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms