RNA–Protein interactions for RNA: ENST00000396682.6

RPA3-202, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RPA3, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-202ENST00000396682 CCM2LQ9NUG4 571 aaPredicted RBP12.22□□□□□ -0.45
RPA3-202ENST00000396682 ALKBH4Q9NXW9 302 aa12.22□□□□□ -0.45
RPA3-202ENST00000396682 RNF112Q9ULX5 631 aa12.22□□□□□ -0.45
RPA3-202ENST00000396682 SNX24Q9Y343 169 aa12.22□□□□□ -0.45
RPA3-202ENST00000396682 CHCHD2Q9Y6H1 151 aaPredicted RBP12.22□□□□□ -0.45
RPA3-202ENST00000396682 SPACA6W5XKT8 324 aa12.22□□□□□ -0.45
RPA3-202ENST00000396682 TCRBV9S1A1TA0A576 114 aa12.21□□□□□ -0.45
RPA3-202ENST00000396682 FAM221AA4D161 298 aa12.21□□□□□ -0.45
RPA3-202ENST00000396682 WASHC1A8K0Z3 465 aa12.21□□□□□ -0.45
RPA3-202ENST00000396682 PLPP1O14494 284 aa12.21□□□□□ -0.45
RPA3-202ENST00000396682 LRATO95237 230 aa12.21□□□□□ -0.45
RPA3-202ENST00000396682 CLPSP04118 112 aa12.21□□□□□ -0.45
RPA3-202ENST00000396682 FBXO45P0C2W1 286 aa12.21□□□□□ -0.45
RPA3-202ENST00000396682 PCNAP12004 261 aa12.21□□□□□ -0.45
RPA3-202ENST00000396682 CD99P14209 185 aa12.21□□□□□ -0.45
RPA3-202ENST00000396682 COX7A2P14406 83 aa12.21□□□□□ -0.45
RPA3-202ENST00000396682 STMN1P16949 149 aa12.21□□□□□ -0.45
RPA3-202ENST00000396682 HNRNPH2P55795 449 aaKnown RBP12.21□□□□□ -0.45
RPA3-202ENST00000396682 RAB10P61026 200 aa12.21□□□□□ -0.45
RPA3-202ENST00000396682 KCNJ2P63252 427 aa12.21□□□□□ -0.45
RPA3-202ENST00000396682 MRPS25P82663 173 aaKnown RBP12.21□□□□□ -0.45
RPA3-202ENST00000396682 TNFRSF17Q02223 184 aa12.21□□□□□ -0.45
RPA3-202ENST00000396682 PCDH1Q08174 1060 aa12.21□□□□□ -0.45
RPA3-202ENST00000396682 DEPDC1Q5TB30 811 aa12.21□□□□□ -0.45
RPA3-202ENST00000396682 OR4C11Q6IEV9 310 aa12.21□□□□□ -0.45
RPA3-202ENST00000396682 CHSY3Q70JA7 882 aa12.21□□□□□ -0.45
RPA3-202ENST00000396682 ISCA2Q86U28 154 aa12.21□□□□□ -0.45
RPA3-202ENST00000396682 ULK2Q8IYT8 1036 aa12.21□□□□□ -0.45
RPA3-202ENST00000396682 FBXW8Q8N3Y1 598 aa12.21□□□□□ -0.45
RPA3-202ENST00000396682 SLC22A8Q8TCC7 542 aa12.21□□□□□ -0.45
RPA3-202ENST00000396682 KRT12Q99456 494 aa12.21□□□□□ -0.45
RPA3-202ENST00000396682 CPNE1Q99829 537 aa12.21□□□□□ -0.45
RPA3-202ENST00000396682 GPATCH1Q9BRR8 931 aaKnown RBP12.21□□□□□ -0.45
RPA3-202ENST00000396682 ZNF717Q9BY31 904 aaPredicted RBP12.21□□□□□ -0.45
RPA3-202ENST00000396682 ALG9Q9H6U8 611 aa12.21□□□□□ -0.45
RPA3-202ENST00000396682 EXO5Q9H790 373 aa12.21□□□□□ -0.45
RPA3-202ENST00000396682 RPF2Q9H7B2 306 aaKnown RBP12.21□□□□□ -0.45
RPA3-202ENST00000396682 ACKR4Q9NPB9 350 aa12.21□□□□□ -0.45
RPA3-202ENST00000396682 CRIM1Q9NZV1 1036 aa12.21□□□□□ -0.45
RPA3-202ENST00000396682 ST6GALNAC2Q9UJ37 374 aa12.21□□□□□ -0.45
RPA3-202ENST00000396682 CNOT11Q9UKZ1 510 aaKnown RBP12.21□□□□□ -0.45
RPA3-202ENST00000396682 KIAA1549Q9HCM3 1950 aa12.2□□□□□ -0.46
RPA3-202ENST00000396682 FAM159BA6NKW6 160 aa12.2□□□□□ -0.46
RPA3-202ENST00000396682 UBXN8O00124 270 aa12.2□□□□□ -0.46
RPA3-202ENST00000396682 SLC35E2BP0CK96 405 aa12.2□□□□□ -0.46
RPA3-202ENST00000396682 GABRA1P14867 456 aa12.2□□□□□ -0.46
RPA3-202ENST00000396682 GP5P40197 560 aa12.2□□□□□ -0.46
RPA3-202ENST00000396682 KIR2DL3P43628 341 aa12.2□□□□□ -0.46
RPA3-202ENST00000396682 WNT3P56703 355 aa12.2□□□□□ -0.46
RPA3-202ENST00000396682 HERVK_113P63132 956 aa12.2□□□□□ -0.46
RPA3-202ENST00000396682 ERVK-8P63133 956 aa12.2□□□□□ -0.46
RPA3-202ENST00000396682 PLIN5Q00G26 463 aa12.2□□□□□ -0.46
RPA3-202ENST00000396682 ILF2Q12905 390 aaKnown RBP12.2□□□□□ -0.46
RPA3-202ENST00000396682 EBPQ15125 230 aaKnown RBP12.2□□□□□ -0.46
RPA3-202ENST00000396682 SPRED3Q2MJR0 410 aa12.2□□□□□ -0.46
RPA3-202ENST00000396682 POMZP3Q6PJE2 187 aa12.2□□□□□ -0.46
RPA3-202ENST00000396682 CMC1Q7Z7K0 106 aa12.2□□□□□ -0.46
RPA3-202ENST00000396682 GPR180Q86V85 440 aa12.2□□□□□ -0.46
RPA3-202ENST00000396682 TGIF2LYQ8IUE0 185 aa12.2□□□□□ -0.46
RPA3-202ENST00000396682 SLC15A4Q8N697 577 aa12.2□□□□□ -0.46
RPA3-202ENST00000396682 FAM13CQ8NE31 585 aa12.2□□□□□ -0.46
RPA3-202ENST00000396682 HUS1BQ8NHY5 278 aa12.2□□□□□ -0.46
RPA3-202ENST00000396682 NEIL3Q8TAT5 605 aa12.2□□□□□ -0.46
RPA3-202ENST00000396682 PYROXD1Q8WU10 500 aa12.2□□□□□ -0.46
RPA3-202ENST00000396682 UBTD2Q8WUN7 234 aa12.2□□□□□ -0.46
RPA3-202ENST00000396682 UBE2E3Q969T4 207 aa12.2□□□□□ -0.46
RPA3-202ENST00000396682 CMTM7Q96FZ5 175 aa12.2□□□□□ -0.46
RPA3-202ENST00000396682 RBM18Q96H35 190 aaKnown RBP12.2□□□□□ -0.46
RPA3-202ENST00000396682 GAL3ST4Q96RP7 486 aa12.2□□□□□ -0.46
RPA3-202ENST00000396682 ATOH8Q96SQ7 321 aa12.2□□□□□ -0.46
RPA3-202ENST00000396682 SH3GL2Q99962 352 aa12.2□□□□□ -0.46
RPA3-202ENST00000396682 ERVK-6Q9BXR3 956 aa12.2□□□□□ -0.46
RPA3-202ENST00000396682 POLDIP3Q9BY77 421 aaKnown RBP12.2□□□□□ -0.46
RPA3-202ENST00000396682 WWTR1Q9GZV5 400 aa12.2□□□□□ -0.46
RPA3-202ENST00000396682 CLEC4MQ9H2X3 399 aaPredicted RBP12.2□□□□□ -0.46
RPA3-202ENST00000396682 DMRT3Q9NQL9 472 aa12.2□□□□□ -0.46
RPA3-202ENST00000396682 RASSF1Q9NS23 344 aa12.2□□□□□ -0.46
RPA3-202ENST00000396682 NUDT4Q9NZJ9 180 aa12.2□□□□□ -0.46
RPA3-202ENST00000396682 CNIH4Q9P003 139 aa12.2□□□□□ -0.46
RPA3-202ENST00000396682 B4GALT7Q9UBV7 327 aa12.2□□□□□ -0.46
RPA3-202ENST00000396682 BOKQ9UMX3 212 aaPredicted RBP12.2□□□□□ -0.46
RPA3-202ENST00000396682 ERVK-19Q9WJR5 959 aa12.2□□□□□ -0.46
RPA3-202ENST00000396682 PCDHGB3Q9Y5G1 929 aa12.2□□□□□ -0.46
RPA3-202ENST00000396682 FAM47E-STBD1D6RA91 191 aa12.19□□□□□ -0.46
RPA3-202ENST00000396682 CCDC188H7C350 402 aa12.19□□□□□ -0.46
RPA3-202ENST00000396682 K7EPI3 171 aa12.19□□□□□ -0.46
RPA3-202ENST00000396682 SYT5O00445 386 aa12.19□□□□□ -0.46
RPA3-202ENST00000396682 PROM1O43490 865 aa12.19□□□□□ -0.46
RPA3-202ENST00000396682 TMPRSS11DO60235 418 aa12.19□□□□□ -0.46
RPA3-202ENST00000396682 FAM155BO75949 473 aa12.19□□□□□ -0.46
RPA3-202ENST00000396682 S100BP04271 92 aaPredicted RBP12.19□□□□□ -0.46
RPA3-202ENST00000396682 MTHFD2P13995 350 aa12.19□□□□□ -0.46
RPA3-202ENST00000396682 ALOX15P16050 662 aaPredicted RBP12.19□□□□□ -0.46
RPA3-202ENST00000396682 HOXB4P17483 251 aaPredicted RBP12.19□□□□□ -0.46
RPA3-202ENST00000396682 SERPINB1P30740 379 aa12.19□□□□□ -0.46
RPA3-202ENST00000396682 TRPC1P48995 793 aa12.19□□□□□ -0.46
RPA3-202ENST00000396682 SLC37A1P57057 533 aa12.19□□□□□ -0.46
RPA3-202ENST00000396682 GPX6P59796 221 aa12.19□□□□□ -0.46
RPA3-202ENST00000396682 DDX39BQ13838 428 aaKnown RBP12.19□□□□□ -0.46
RPA3-202ENST00000396682 NTRK2Q16620 822 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms