RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 KXD1Q9BQD3 176 aa10.05□□□□□ -0.8
CALD1-203ENST00000393118 MRPL39Q9NYK5 338 aaKnown RBP10.05□□□□□ -0.8
CALD1-203ENST00000393118 RNF6Q9Y252 685 aa10.05□□□□□ -0.8
CALD1-203ENST00000393118 SMIM30A4D0T7 59 aa10.04□□□□□ -0.8
CALD1-203ENST00000393118 GRXCR1A8MXD5 290 aa10.04□□□□□ -0.8
CALD1-203ENST00000393118 PLD2O14939 933 aa10.04□□□□□ -0.8
CALD1-203ENST00000393118 CAPN5O15484 640 aaPredicted RBP10.04□□□□□ -0.8
CALD1-203ENST00000393118 PSIP1O75475 530 aaKnown RBP10.04□□□□□ -0.8
CALD1-203ENST00000393118 RPLP0P05388 317 aaKnown RBP10.04□□□□□ -0.8
CALD1-203ENST00000393118 CKMT1AP12532 417 aa10.04□□□□□ -0.8
CALD1-203ENST00000393118 BMP4P12644 408 aa10.04□□□□□ -0.8
CALD1-203ENST00000393118 HTR1BP28222 390 aa10.04□□□□□ -0.8
CALD1-203ENST00000393118 EPHA2P29317 976 aa10.04□□□□□ -0.8
CALD1-203ENST00000393118 XKP51811 444 aa10.04□□□□□ -0.8
CALD1-203ENST00000393118 ERVK-21P61565 698 aa10.04□□□□□ -0.8
CALD1-203ENST00000393118 HENMT1Q5T8I9 393 aaKnown RBP10.04□□□□□ -0.8
CALD1-203ENST00000393118 SLCO4C1Q6ZQN7 724 aa10.04□□□□□ -0.8
CALD1-203ENST00000393118 C6orf120Q7Z4R8 191 aa10.04□□□□□ -0.8
CALD1-203ENST00000393118 TMC8Q8IU68 726 aa10.04□□□□□ -0.8
CALD1-203ENST00000393118 OR52N2Q8NGI0 321 aa10.04□□□□□ -0.8
CALD1-203ENST00000393118 TEX47Q8TBZ9 253 aa10.04□□□□□ -0.8
CALD1-203ENST00000393118 AKAP1Q92667 903 aaKnown RBP eCLIP10.04□□□□□ -0.8
CALD1-203ENST00000393118 NXPE3Q969Y0 559 aa10.04□□□□□ -0.8
CALD1-203ENST00000393118 BHLHE41Q9C0J9 482 aaPredicted RBP10.04□□□□□ -0.8
CALD1-203ENST00000393118 DSN1Q9H410 356 aa10.04□□□□□ -0.8
CALD1-203ENST00000393118 BRF2Q9HAW0 419 aa10.04□□□□□ -0.8
CALD1-203ENST00000393118 CUEDC1Q9NWM3 386 aaPredicted RBP10.04□□□□□ -0.8
CALD1-203ENST00000393118 SLC27A6Q9Y2P4 619 aa10.04□□□□□ -0.8
CALD1-203ENST00000393118 MRPS7Q9Y2R9 242 aaKnown RBP10.04□□□□□ -0.8
CALD1-203ENST00000393118 URB1O60287 2271 aaKnown RBP10.04□□□□□ -0.8
CALD1-203ENST00000393118 OR52A4PA6NMU1 304 aa10.04□□□□□ -0.8
CALD1-203ENST00000393118 KAT7O95251 611 aa10.04□□□□□ -0.8
CALD1-203ENST00000393118 CTSLP07711 333 aa10.04□□□□□ -0.8
CALD1-203ENST00000393118 MYOGP15173 224 aa10.04□□□□□ -0.8
CALD1-203ENST00000393118 NOS3P29474 1203 aa10.04□□□□□ -0.8
CALD1-203ENST00000393118 ACTR1BP42025 376 aa10.04□□□□□ -0.8
CALD1-203ENST00000393118 PPP5CP53041 499 aa10.04□□□□□ -0.8
CALD1-203ENST00000393118 RGS8P57771 180 aaPredicted RBP10.04□□□□□ -0.8
CALD1-203ENST00000393118 ACTR1AP61163 376 aa10.04□□□□□ -0.8
CALD1-203ENST00000393118 TSTQ16762 297 aaKnown RBP10.04□□□□□ -0.8
CALD1-203ENST00000393118 CRB2Q5IJ48 1285 aa10.04□□□□□ -0.8
CALD1-203ENST00000393118 MSANTD1Q6ZTZ1 278 aa10.04□□□□□ -0.8
CALD1-203ENST00000393118 NLGN4XQ8N0W4 816 aa10.04□□□□□ -0.8
CALD1-203ENST00000393118 CYP4Z2PQ8N1L4 340 aa10.04□□□□□ -0.8
CALD1-203ENST00000393118 C10orf111Q8N326 155 aa10.04□□□□□ -0.8
CALD1-203ENST00000393118 TCEANCQ8N8B7 351 aa10.04□□□□□ -0.8
CALD1-203ENST00000393118 ARRDC3Q96B67 414 aa10.04□□□□□ -0.8
CALD1-203ENST00000393118 C3orf14Q9HBI5 128 aa10.04□□□□□ -0.8
CALD1-203ENST00000393118 DIABLOQ9NR28 239 aa10.04□□□□□ -0.8
CALD1-203ENST00000393118 TM7SF3Q9NS93 570 aa10.04□□□□□ -0.8
CALD1-203ENST00000393118 SOBPA7XYQ1 873 aa10.04□□□□□ -0.8
CALD1-203ENST00000393118 PRR23D1E9PI22 279 aaPredicted RBP10.04□□□□□ -0.8
CALD1-203ENST00000393118 H0YIV9 168 aa10.04□□□□□ -0.8
CALD1-203ENST00000393118 TLX2O43763 284 aaPredicted RBP10.04□□□□□ -0.8
CALD1-203ENST00000393118 CH25HO95992 272 aa10.04□□□□□ -0.8
CALD1-203ENST00000393118 PRR23D2P0DMB1 279 aaPredicted RBP10.04□□□□□ -0.8
CALD1-203ENST00000393118 PAICSP22234 425 aaKnown RBP10.04□□□□□ -0.8
CALD1-203ENST00000393118 IL32P24001 234 aa10.04□□□□□ -0.8
CALD1-203ENST00000393118 VEZF1Q14119 521 aa10.04□□□□□ -0.8
CALD1-203ENST00000393118 MAD2L1BPQ15013 274 aaPredicted RBP10.04□□□□□ -0.8
CALD1-203ENST00000393118 FAM131AQ6UXB0 335 aa10.04□□□□□ -0.8
CALD1-203ENST00000393118 NRSN1Q8IZ57 195 aa10.04□□□□□ -0.8
CALD1-203ENST00000393118 MMP21Q8N119 569 aa10.04□□□□□ -0.8
CALD1-203ENST00000393118 OR8J2Q8NGG1 315 aa10.04□□□□□ -0.8
CALD1-203ENST00000393118 OR13F1Q8NGS4 319 aa10.04□□□□□ -0.8
CALD1-203ENST00000393118 TRIM43Q96BQ3 446 aaPredicted RBP10.04□□□□□ -0.8
CALD1-203ENST00000393118 TMEM19Q96HH6 336 aa10.04□□□□□ -0.8
CALD1-203ENST00000393118 POLR2J2Q9GZM3 115 aaKnown RBP10.04□□□□□ -0.8
CALD1-203ENST00000393118 PCBD2Q9H0N5 130 aa10.04□□□□□ -0.8
CALD1-203ENST00000393118 SLC35C2Q9NQQ7 365 aa10.04□□□□□ -0.8
CALD1-203ENST00000393118 PAK1IP1Q9NWT1 392 aaPredicted RBP10.04□□□□□ -0.8
CALD1-203ENST00000393118 VNN3Q9NY84 501 aa10.04□□□□□ -0.8
CALD1-203ENST00000393118 POLHQ9Y253 713 aa10.04□□□□□ -0.8
CALD1-203ENST00000393118 A8MUA0 341 aa10.04□□□□□ -0.8
CALD1-203ENST00000393118 TLR4O00206 839 aa10.04□□□□□ -0.8
CALD1-203ENST00000393118 GPR37L1O60883 481 aa10.04□□□□□ -0.8
CALD1-203ENST00000393118 CA3P07451 260 aa10.04□□□□□ -0.8
CALD1-203ENST00000393118 HNRNPA1P09651 372 aaKnown RBP eCLIP10.04□□□□□ -0.8
CALD1-203ENST00000393118 IFNGR2P38484 337 aa10.04□□□□□ -0.8
CALD1-203ENST00000393118 RNF144AP50876 292 aaPredicted RBP10.04□□□□□ -0.8
CALD1-203ENST00000393118 MVKQ03426 396 aa10.04□□□□□ -0.8
CALD1-203ENST00000393118 FADDQ13158 208 aa10.04□□□□□ -0.8
CALD1-203ENST00000393118 SUZ12Q15022 739 aaKnown RBP10.04□□□□□ -0.8
CALD1-203ENST00000393118 KIAA0040Q15053 153 aa10.04□□□□□ -0.8
CALD1-203ENST00000393118 ENPP7Q6UWV6 458 aa10.04□□□□□ -0.8
CALD1-203ENST00000393118 FAM109AQ8N4B1 249 aa10.04□□□□□ -0.8
CALD1-203ENST00000393118 SMARCD2Q92925 531 aa10.04□□□□□ -0.8
CALD1-203ENST00000393118 ECHDC3Q96DC8 303 aa10.04□□□□□ -0.8
CALD1-203ENST00000393118 TRNT1Q96Q11 434 aaKnown RBP10.04□□□□□ -0.8
CALD1-203ENST00000393118 MBOAT4Q96T53 435 aa10.04□□□□□ -0.8
CALD1-203ENST00000393118 PIP5K1AQ99755 562 aa10.04□□□□□ -0.8
CALD1-203ENST00000393118 RHNO1Q9BSD3 238 aa10.04□□□□□ -0.8
CALD1-203ENST00000393118 HDHD2Q9H0R4 259 aa10.04□□□□□ -0.8
CALD1-203ENST00000393118 BTNL2Q9UIR0 455 aa10.04□□□□□ -0.8
CALD1-203ENST00000393118 IRAK3Q9Y616 596 aa10.04□□□□□ -0.8
CALD1-203ENST00000393118 OLFM2O95897 454 aa10.03□□□□□ -0.8
CALD1-203ENST00000393118 NR2F6P10588 404 aa10.03□□□□□ -0.8
CALD1-203ENST00000393118 NPPBP16860 134 aa10.03□□□□□ -0.8
CALD1-203ENST00000393118 CD22P20273 847 aa10.03□□□□□ -0.8
CALD1-203ENST00000393118 PSMA1P25786 263 aaKnown RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms