RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 MLF1P58340 268 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 YWHAGP61981 247 aaKnown RBP eCLIP3.34□□□□□ -1.87
XRN1-202ENST00000392981 RPL23AP62750 156 aaKnown RBP3.34□□□□□ -1.87
XRN1-202ENST00000392981 ARHGAP1Q07960 439 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 PMS2P3Q13401 168 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 MRPL23Q16540 153 aaKnown RBP3.34□□□□□ -1.87
XRN1-202ENST00000392981 ATL3Q6DD88 541 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 Q6ZWC4 215 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 NDUFAF7Q7L592 441 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 TMEM17Q86X19 198 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 GPR135Q8IZ08 494 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 CHDHQ8NE62 594 aaPredicted RBP3.34□□□□□ -1.87
XRN1-202ENST00000392981 FAM71F1Q96KD3 344 aaPredicted RBP3.34□□□□□ -1.87
XRN1-202ENST00000392981 OR1F2PQ96R84 312 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 CLCC1Q96S66 551 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 TEX101Q9BY14 249 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 HIF1ANQ9NWT6 349 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 CTTNBP2NLQ9P2B4 639 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 C19orf25Q9UFG5 118 aaPredicted RBP3.34□□□□□ -1.87
XRN1-202ENST00000392981 TUBGCP4Q9UGJ1 667 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 RHBDD3Q9Y3P4 386 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 PTPRGP23470 1445 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 CCDC188H7C350 402 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 EPHB6O15197 1021 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 NUAK1O60285 661 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 CBFA2T3O75081 653 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 ANXA9O76027 345 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 DIRAS1O95057 198 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 SIX3O95343 332 aaPredicted RBP3.34□□□□□ -1.87
XRN1-202ENST00000392981 FGGP02679 453 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 CAPN1P07384 714 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 F3P13726 295 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 STX2P32856 288 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 IER3P46695 156 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 CASP8Q14790 479 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 STXBP2Q15833 593 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 SEL1L2Q5TEA6 688 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 LIPJQ5W064 366 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 SLC8B1Q6J4K2 584 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 RHBDD2Q6NTF9 364 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 EID3Q8N140 333 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 FAM58AQ8N1B3 248 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 GPX8Q8TED1 209 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 MCHR2Q969V1 340 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 UHRF2Q96PU4 802 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 TMEM79Q9BSE2 394 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 PINK1Q9BXM7 581 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 STRADBQ9C0K7 418 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 NPAP1Q9NZP6 1156 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 DTX4Q9Y2E6 619 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 PLXNC1O60486 1568 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 VWDEQ8N2E2 1590 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 STRCP1A6NGW2 1772 aa3.34□□□□□ -1.88
XRN1-202ENST00000392981 FEZF1A0PJY2 475 aa3.34□□□□□ -1.88
XRN1-202ENST00000392981 PRR23AA6NEV1 266 aa3.34□□□□□ -1.88
XRN1-202ENST00000392981 PPIAL4DF5H284 164 aa3.34□□□□□ -1.88
XRN1-202ENST00000392981 F8VVB4 439 aa3.34□□□□□ -1.88
XRN1-202ENST00000392981 F8VWA3 439 aa3.34□□□□□ -1.88
XRN1-202ENST00000392981 TOR1AO14656 332 aa3.34□□□□□ -1.88
XRN1-202ENST00000392981 RNMTO43148 476 aaKnown RBP3.34□□□□□ -1.88
XRN1-202ENST00000392981 OR1F1O43749 312 aa3.34□□□□□ -1.88
XRN1-202ENST00000392981 NXPH2O95156 264 aa3.34□□□□□ -1.88
XRN1-202ENST00000392981 STBD1O95210 358 aa3.34□□□□□ -1.88
XRN1-202ENST00000392981 POP4O95707 220 aaKnown RBP3.34□□□□□ -1.88
XRN1-202ENST00000392981 CAVIN2O95810 425 aa3.34□□□□□ -1.88
XRN1-202ENST00000392981 CR2P20023 1033 aa3.34□□□□□ -1.88
XRN1-202ENST00000392981 CYLC1P35663 651 aaPredicted RBP3.34□□□□□ -1.88
XRN1-202ENST00000392981 CDKN1BP46527 198 aa3.34□□□□□ -1.88
XRN1-202ENST00000392981 CCL11P51671 97 aa3.34□□□□□ -1.88
XRN1-202ENST00000392981 KPNA2P52292 529 aaKnown RBP3.34□□□□□ -1.88
XRN1-202ENST00000392981 EEF1A2Q05639 463 aaKnown RBP3.34□□□□□ -1.88
XRN1-202ENST00000392981 LGALS3BPQ08380 585 aa3.34□□□□□ -1.88
XRN1-202ENST00000392981 CAPRIN1Q14444 709 aaKnown RBP3.34□□□□□ -1.88
XRN1-202ENST00000392981 PDCD4Q53EL6 469 aaKnown RBP3.34□□□□□ -1.88
XRN1-202ENST00000392981 PPM1LQ5SGD2 360 aa3.34□□□□□ -1.88
XRN1-202ENST00000392981 NDUFAF5Q5TEU4 345 aa3.34□□□□□ -1.88
XRN1-202ENST00000392981 KCTD18Q6PI47 426 aaPredicted RBP3.34□□□□□ -1.88
XRN1-202ENST00000392981 NCCRP1Q6ZVX7 275 aaPredicted RBP3.34□□□□□ -1.88
XRN1-202ENST00000392981 RFPL4BQ6ZWI9 263 aa3.34□□□□□ -1.88
XRN1-202ENST00000392981 SSX9Q7RTT3 188 aa3.34□□□□□ -1.88
XRN1-202ENST00000392981 CCDC60Q8IWA6 550 aaPredicted RBP3.34□□□□□ -1.88
XRN1-202ENST00000392981 PNLDC1Q8NA58 520 aaKnown RBP3.34□□□□□ -1.88
XRN1-202ENST00000392981 FAM131CQ96AQ9 280 aa3.34□□□□□ -1.88
XRN1-202ENST00000392981 BPIFA2Q96DR5 249 aa3.34□□□□□ -1.88
XRN1-202ENST00000392981 LRFN5Q96NI6 719 aa3.34□□□□□ -1.88
XRN1-202ENST00000392981 OSBPL9Q96SU4 736 aa3.34□□□□□ -1.88
XRN1-202ENST00000392981 LRRN3Q9H3W5 708 aa3.34□□□□□ -1.88
XRN1-202ENST00000392981 GDF3Q9NR23 364 aa3.34□□□□□ -1.88
XRN1-202ENST00000392981 DIABLOQ9NR28 239 aa3.34□□□□□ -1.88
XRN1-202ENST00000392981 ZFP57Q9NU63 452 aa3.34□□□□□ -1.88
XRN1-202ENST00000392981 ZNF319Q9P2F9 582 aa3.34□□□□□ -1.88
XRN1-202ENST00000392981 POMT2Q9UKY4 750 aa3.34□□□□□ -1.88
XRN1-202ENST00000392981 PSMD13Q9UNM6 376 aa3.34□□□□□ -1.88
XRN1-202ENST00000392981 KAT6AQ92794 2004 aa3.34□□□□□ -1.88
XRN1-202ENST00000392981 GRIN2BQ13224 1484 aa3.34□□□□□ -1.88
XRN1-202ENST00000392981 MYO5BQ9ULV0 1848 aa3.34□□□□□ -1.88
XRN1-202ENST00000392981 ZCCHC11Q5TAX3 1644 aaKnown RBP3.34□□□□□ -1.88
XRN1-202ENST00000392981 MED19A0JLT2 244 aaPredicted RBP3.34□□□□□ -1.88
XRN1-202ENST00000392981 GOLGA8RI6L899 631 aa3.34□□□□□ -1.88
XRN1-202ENST00000392981 SDHDO14521 159 aa3.34□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms