RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 PRELID3BQ9Y3B1 194 aa13.97□□□□□ -0.17
VPS9D1-201ENST00000389386 CPSF4O95639 269 aaKnown RBP13.97□□□□□ -0.17
VPS9D1-201ENST00000389386 TBX18O95935 607 aa13.97□□□□□ -0.17
VPS9D1-201ENST00000389386 PDYNP01213 254 aa13.97□□□□□ -0.17
VPS9D1-201ENST00000389386 C1SP09871 688 aa13.97□□□□□ -0.17
VPS9D1-201ENST00000389386 CTPS1P17812 591 aa13.97□□□□□ -0.17
VPS9D1-201ENST00000389386 HAAOP46952 286 aa13.97□□□□□ -0.17
VPS9D1-201ENST00000389386 AVPR1BP47901 424 aa13.97□□□□□ -0.17
VPS9D1-201ENST00000389386 TTPAP49638 278 aa13.97□□□□□ -0.17
VPS9D1-201ENST00000389386 GATMP50440 423 aa13.97□□□□□ -0.17
VPS9D1-201ENST00000389386 DGKEP52429 567 aa13.97□□□□□ -0.17
VPS9D1-201ENST00000389386 CLLU1OSQ5K130 101 aa13.97□□□□□ -0.17
VPS9D1-201ENST00000389386 TMEM201Q5SNT2 666 aa13.97□□□□□ -0.17
VPS9D1-201ENST00000389386 RETSATQ6NUM9 610 aa13.97□□□□□ -0.17
VPS9D1-201ENST00000389386 BHLHB9Q6PI77 547 aa13.97□□□□□ -0.17
VPS9D1-201ENST00000389386 ZNF600Q6ZNG1 722 aa13.97□□□□□ -0.17
VPS9D1-201ENST00000389386 OVCH2Q7RTZ1 564 aa13.97□□□□□ -0.17
VPS9D1-201ENST00000389386 OR8D4Q8NGM9 314 aa13.97□□□□□ -0.17
VPS9D1-201ENST00000389386 C1GALT1C1Q96EU7 318 aa13.97□□□□□ -0.17
VPS9D1-201ENST00000389386 ATF6BQ99941 703 aa13.97□□□□□ -0.17
VPS9D1-201ENST00000389386 POLR1EQ9GZS1 481 aaKnown RBP13.97□□□□□ -0.17
VPS9D1-201ENST00000389386 CDCP1Q9H5V8 836 aa13.97□□□□□ -0.17
VPS9D1-201ENST00000389386 TPT1P8Q9HAU6 139 aa13.97□□□□□ -0.17
VPS9D1-201ENST00000389386 ACER3Q9NUN7 267 aa13.97□□□□□ -0.17
VPS9D1-201ENST00000389386 ENOPH1Q9UHY7 261 aa13.97□□□□□ -0.17
VPS9D1-201ENST00000389386 DHRS7Q9Y394 339 aa13.97□□□□□ -0.17
VPS9D1-201ENST00000389386 AP1M2Q9Y6Q5 423 aa13.97□□□□□ -0.17
VPS9D1-201ENST00000389386 TET1Q8NFU7 2136 aa13.96□□□□□ -0.17
VPS9D1-201ENST00000389386 M0QZQ0 153 aa13.96□□□□□ -0.17
VPS9D1-201ENST00000389386 BDKRB1P46663 353 aa13.96□□□□□ -0.17
VPS9D1-201ENST00000389386 LIMS1P48059 325 aa13.96□□□□□ -0.17
VPS9D1-201ENST00000389386 ERVK-21P61565 698 aa13.96□□□□□ -0.17
VPS9D1-201ENST00000389386 POLR2GP62487 172 aaKnown RBP eCLIP13.96□□□□□ -0.17
VPS9D1-201ENST00000389386 RPS25P62851 125 aaKnown RBP13.96□□□□□ -0.17
VPS9D1-201ENST00000389386 ZNF91Q05481 1191 aa13.96□□□□□ -0.17
VPS9D1-201ENST00000389386 COX10Q12887 443 aa13.96□□□□□ -0.17
VPS9D1-201ENST00000389386 DUSP6Q16828 381 aa13.96□□□□□ -0.17
VPS9D1-201ENST00000389386 MPPE1Q53F39 396 aa13.96□□□□□ -0.17
VPS9D1-201ENST00000389386 C3orf38Q5JPI3 329 aa13.96□□□□□ -0.17
VPS9D1-201ENST00000389386 THEM5Q8N1Q8 247 aa13.96□□□□□ -0.17
VPS9D1-201ENST00000389386 AQP11Q8NBQ7 271 aa13.96□□□□□ -0.17
VPS9D1-201ENST00000389386 ATAD1Q8NBU5 361 aa13.96□□□□□ -0.17
VPS9D1-201ENST00000389386 TRIB3Q96RU7 358 aa13.96□□□□□ -0.17
VPS9D1-201ENST00000389386 SLC29A3Q9BZD2 475 aa13.96□□□□□ -0.17
VPS9D1-201ENST00000389386 OR51J1Q9H342 316 aa13.96□□□□□ -0.17
VPS9D1-201ENST00000389386 SAGE1Q9NXZ1 904 aa13.96□□□□□ -0.17
VPS9D1-201ENST00000389386 FZD4Q9ULV1 537 aa13.96□□□□□ -0.17
VPS9D1-201ENST00000389386 J3KTA2 159 aa13.96□□□□□ -0.18
VPS9D1-201ENST00000389386 TLR4O00206 839 aa13.96□□□□□ -0.18
VPS9D1-201ENST00000389386 LRRTM2O43300 516 aa13.96□□□□□ -0.18
VPS9D1-201ENST00000389386 PAHP00439 452 aa13.96□□□□□ -0.18
VPS9D1-201ENST00000389386 GASTP01350 101 aa13.96□□□□□ -0.18
VPS9D1-201ENST00000389386 OPN1SWP03999 348 aa13.96□□□□□ -0.18
VPS9D1-201ENST00000389386 RBBP4Q09028 425 aa13.96□□□□□ -0.18
VPS9D1-201ENST00000389386 GPR68Q15743 365 aa13.96□□□□□ -0.18
VPS9D1-201ENST00000389386 CRTC2Q53ET0 693 aaPredicted RBP13.96□□□□□ -0.18
VPS9D1-201ENST00000389386 CLECL1Q8IZS7 167 aa13.96□□□□□ -0.18
VPS9D1-201ENST00000389386 OR4A15Q8NGL6 344 aa13.96□□□□□ -0.18
VPS9D1-201ENST00000389386 OR2T4Q8NH00 348 aa13.96□□□□□ -0.18
VPS9D1-201ENST00000389386 LINC01599Q8WXQ3 324 aa13.96□□□□□ -0.18
VPS9D1-201ENST00000389386 COQ10AQ96MF6 247 aa13.96□□□□□ -0.18
VPS9D1-201ENST00000389386 PELOQ9BRX2 385 aaKnown RBP13.96□□□□□ -0.18
VPS9D1-201ENST00000389386 C11orf16Q9NQ32 467 aa13.96□□□□□ -0.18
VPS9D1-201ENST00000389386 SF3B6Q9Y3B4 125 aaKnown RBP13.96□□□□□ -0.18
VPS9D1-201ENST00000389386 RPL36Q9Y3U8 105 aaKnown RBP13.96□□□□□ -0.18
VPS9D1-201ENST00000389386 PCDHB11Q9Y5F2 797 aa13.96□□□□□ -0.18
VPS9D1-201ENST00000389386 SPIN1Q9Y657 262 aaPredicted RBP13.96□□□□□ -0.18
VPS9D1-201ENST00000389386 A0A0B4J203 849 aa13.95□□□□□ -0.18
VPS9D1-201ENST00000389386 FAM170BA6NMN3 283 aa13.95□□□□□ -0.18
VPS9D1-201ENST00000389386 KRBOX1C9JBD0 128 aa13.95□□□□□ -0.18
VPS9D1-201ENST00000389386 YY2O15391 372 aa13.95□□□□□ -0.18
VPS9D1-201ENST00000389386 TSPAN3O60637 253 aa13.95□□□□□ -0.18
VPS9D1-201ENST00000389386 CKBP12277 381 aa13.95□□□□□ -0.18
VPS9D1-201ENST00000389386 RHOQP17081 205 aa13.95□□□□□ -0.18
VPS9D1-201ENST00000389386 DNASE1P24855 282 aa13.95□□□□□ -0.18
VPS9D1-201ENST00000389386 PSMA3P25788 255 aa13.95□□□□□ -0.18
VPS9D1-201ENST00000389386 PCGF2P35227 344 aa13.95□□□□□ -0.18
VPS9D1-201ENST00000389386 IRS1P35568 1242 aa13.95□□□□□ -0.18
VPS9D1-201ENST00000389386 HMGA2P52926 109 aa13.95□□□□□ -0.18
VPS9D1-201ENST00000389386 GPR85P60893 370 aa13.95□□□□□ -0.18
VPS9D1-201ENST00000389386 CPSF6Q16630 551 aaKnown RBP eCLIP13.95□□□□□ -0.18
VPS9D1-201ENST00000389386 IFI44LQ53G44 452 aa13.95□□□□□ -0.18
VPS9D1-201ENST00000389386 FIP1L1Q6UN15 594 aaKnown RBP13.95□□□□□ -0.18
VPS9D1-201ENST00000389386 WDR53Q7Z5U6 358 aaPredicted RBP13.95□□□□□ -0.18
VPS9D1-201ENST00000389386 MDGA1Q8NFP4 955 aa13.95□□□□□ -0.18
VPS9D1-201ENST00000389386 SUSD3Q96L08 255 aa13.95□□□□□ -0.18
VPS9D1-201ENST00000389386 SMIM14Q96QK8 99 aa13.95□□□□□ -0.18
VPS9D1-201ENST00000389386 TLR8Q9NR97 1041 aaKnown RBP13.95□□□□□ -0.18
VPS9D1-201ENST00000389386 TAS2R7Q9NYW3 318 aa13.95□□□□□ -0.18
VPS9D1-201ENST00000389386 RAB23Q9ULC3 237 aa13.95□□□□□ -0.18
VPS9D1-201ENST00000389386 ASB4Q9Y574 426 aa13.95□□□□□ -0.18
VPS9D1-201ENST00000389386 TRAV6A0A075B6T7 132 aa13.95□□□□□ -0.18
VPS9D1-201ENST00000389386 LINC01387J3KSC0 135 aa13.95□□□□□ -0.18
VPS9D1-201ENST00000389386 KPNA5O15131 536 aa13.95□□□□□ -0.18
VPS9D1-201ENST00000389386 HRGP04196 525 aa13.95□□□□□ -0.18
VPS9D1-201ENST00000389386 FCER2P06734 321 aa13.95□□□□□ -0.18
VPS9D1-201ENST00000389386 MAPK1P28482 360 aa13.95□□□□□ -0.18
VPS9D1-201ENST00000389386 CRYZQ08257 329 aaKnown RBP13.95□□□□□ -0.18
VPS9D1-201ENST00000389386 UGT8Q16880 541 aa13.95□□□□□ -0.18
VPS9D1-201ENST00000389386 QSOX2Q6ZRP7 698 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms