RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 PCDHGA3Q9Y5H0 932 aa14.18□□□□□ -0.14
SCFD2-201ENST00000388940 KLK4Q9Y5K2 254 aa14.18□□□□□ -0.14
SCFD2-201ENST00000388940 NINQ8N4C6 2090 aa14.18□□□□□ -0.14
SCFD2-201ENST00000388940 TRBV4-1A0A0J9YWV2 114 aa14.18□□□□□ -0.14
SCFD2-201ENST00000388940 TMEM247A6NEH6 219 aa14.18□□□□□ -0.14
SCFD2-201ENST00000388940 METTL15A6NJ78 407 aa14.18□□□□□ -0.14
SCFD2-201ENST00000388940 FAAHO00519 579 aa14.18□□□□□ -0.14
SCFD2-201ENST00000388940 MID1O15344 667 aa14.18□□□□□ -0.14
SCFD2-201ENST00000388940 PCDH8O95206 1070 aa14.18□□□□□ -0.14
SCFD2-201ENST00000388940 PIPP12273 146 aaPredicted RBP14.18□□□□□ -0.14
SCFD2-201ENST00000388940 OSMP13725 252 aa14.18□□□□□ -0.14
SCFD2-201ENST00000388940 EIF2DP41214 584 aaKnown RBP14.18□□□□□ -0.14
SCFD2-201ENST00000388940 SLC15A1P46059 708 aa14.18□□□□□ -0.14
SCFD2-201ENST00000388940 SMIM11AP58511 58 aa14.18□□□□□ -0.14
SCFD2-201ENST00000388940 SNRPGP62308 76 aaKnown RBP14.18□□□□□ -0.14
SCFD2-201ENST00000388940 RELAQ04206 551 aa14.18□□□□□ -0.14
SCFD2-201ENST00000388940 RUNX3Q13761 415 aa14.18□□□□□ -0.14
SCFD2-201ENST00000388940 ENPP2Q13822 863 aa14.18□□□□□ -0.14
SCFD2-201ENST00000388940 MLF2Q15773 248 aaPredicted RBP14.18□□□□□ -0.14
SCFD2-201ENST00000388940 CST6Q15828 149 aa14.18□□□□□ -0.14
SCFD2-201ENST00000388940 ZNF404Q494X3 552 aa14.18□□□□□ -0.14
SCFD2-201ENST00000388940 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.18□□□□□ -0.14
SCFD2-201ENST00000388940 PTCHD4Q6ZW05 846 aa14.18□□□□□ -0.14
SCFD2-201ENST00000388940 ZNF367Q7RTV3 350 aa14.18□□□□□ -0.14
SCFD2-201ENST00000388940 MCFD2Q8NI22 146 aa14.18□□□□□ -0.14
SCFD2-201ENST00000388940 FERD3LQ96RJ6 166 aa14.18□□□□□ -0.14
SCFD2-201ENST00000388940 INSM2Q96T92 566 aaPredicted RBP14.18□□□□□ -0.14
SCFD2-201ENST00000388940 TIMM29Q9BSF4 260 aa14.18□□□□□ -0.14
SCFD2-201ENST00000388940 UCK2Q9BZX2 261 aa14.18□□□□□ -0.14
SCFD2-201ENST00000388940 NXF2Q9GZY0 626 aaKnown RBP14.18□□□□□ -0.14
SCFD2-201ENST00000388940 DSN1Q9H410 356 aa14.18□□□□□ -0.14
SCFD2-201ENST00000388940 WDR26Q9H7D7 661 aa14.18□□□□□ -0.14
SCFD2-201ENST00000388940 FZD3Q9NPG1 666 aa14.18□□□□□ -0.14
SCFD2-201ENST00000388940 TEX10Q9NXF1 929 aaPredicted RBP14.18□□□□□ -0.14
SCFD2-201ENST00000388940 DAPK2Q9UIK4 370 aa14.18□□□□□ -0.14
SCFD2-201ENST00000388940 CKAP5Q14008 2032 aa14.17□□□□□ -0.14
SCFD2-201ENST00000388940 ANTXRLA6NF34 631 aa14.17□□□□□ -0.14
SCFD2-201ENST00000388940 CNOT3O75175 753 aaKnown RBP14.17□□□□□ -0.14
SCFD2-201ENST00000388940 SERPINB7O75635 380 aa14.17□□□□□ -0.14
SCFD2-201ENST00000388940 PTHP01270 115 aa14.17□□□□□ -0.14
SCFD2-201ENST00000388940 PORP16435 677 aaPredicted RBP14.17□□□□□ -0.14
SCFD2-201ENST00000388940 ELAVL4P26378 380 aaKnown RBP14.17□□□□□ -0.14
SCFD2-201ENST00000388940 CD40LGP29965 261 aa14.17□□□□□ -0.14
SCFD2-201ENST00000388940 CNR2P34972 360 aa14.17□□□□□ -0.14
SCFD2-201ENST00000388940 HOXD12P35452 270 aa14.17□□□□□ -0.14
SCFD2-201ENST00000388940 TGFBR1P36897 503 aa14.17□□□□□ -0.14
SCFD2-201ENST00000388940 RAB28P51157 221 aa14.17□□□□□ -0.14
SCFD2-201ENST00000388940 IFITM3Q01628 133 aa14.17□□□□□ -0.14
SCFD2-201ENST00000388940 DCST1Q5T197 706 aa14.17□□□□□ -0.14
SCFD2-201ENST00000388940 TUBA3EQ6PEY2 450 aa14.17□□□□□ -0.14
SCFD2-201ENST00000388940 OR2A1Q8NGT9 310 aa14.17□□□□□ -0.14
SCFD2-201ENST00000388940 RAB8BQ92930 207 aa14.17□□□□□ -0.14
SCFD2-201ENST00000388940 CAMK1GQ96NX5 476 aa14.17□□□□□ -0.14
SCFD2-201ENST00000388940 TEFMQ96QE5 360 aaKnown RBP14.17□□□□□ -0.14
SCFD2-201ENST00000388940 FUZQ9BT04 418 aa14.17□□□□□ -0.14
SCFD2-201ENST00000388940 RAB11FIP5Q9BXF6 653 aa14.17□□□□□ -0.14
SCFD2-201ENST00000388940 SERHL2Q9H4I8 314 aa14.17□□□□□ -0.14
SCFD2-201ENST00000388940 ZBTB20Q9HC78 741 aaPredicted RBP14.17□□□□□ -0.14
SCFD2-201ENST00000388940 ZDHHC4Q9NPG8 344 aa14.17□□□□□ -0.14
SCFD2-201ENST00000388940 SLC6A14Q9UN76 642 aa14.17□□□□□ -0.14
SCFD2-201ENST00000388940 GPC6Q9Y625 555 aaPredicted RBP14.17□□□□□ -0.14
SCFD2-201ENST00000388940 ATG2AQ2TAZ0 1938 aa14.17□□□□□ -0.14
SCFD2-201ENST00000388940 LRIT2A6NDA9 550 aa14.17□□□□□ -0.14
SCFD2-201ENST00000388940 SH3BP5O60239 455 aa14.17□□□□□ -0.14
SCFD2-201ENST00000388940 SEMA7AO75326 666 aa14.17□□□□□ -0.14
SCFD2-201ENST00000388940 ADH1BP00325 375 aa14.17□□□□□ -0.14
SCFD2-201ENST00000388940 H1F0P07305 194 aaKnown RBP14.17□□□□□ -0.14
SCFD2-201ENST00000388940 ALOX5P09917 674 aa14.17□□□□□ -0.14
SCFD2-201ENST00000388940 MYOGP15173 224 aa14.17□□□□□ -0.14
SCFD2-201ENST00000388940 CDH3P22223 829 aa14.17□□□□□ -0.14
SCFD2-201ENST00000388940 RGS6P49758 472 aa14.17□□□□□ -0.14
SCFD2-201ENST00000388940 PPP5CP53041 499 aa14.17□□□□□ -0.14
SCFD2-201ENST00000388940 ARFIP1P53367 373 aa14.17□□□□□ -0.14
SCFD2-201ENST00000388940 GPM6BQ13491 265 aa14.17□□□□□ -0.14
SCFD2-201ENST00000388940 ZIC1Q15915 447 aa14.17□□□□□ -0.14
SCFD2-201ENST00000388940 ARMCX4Q5H9R4 360 aa14.17□□□□□ -0.14
SCFD2-201ENST00000388940 TANGO2Q6ICL3 276 aa14.17□□□□□ -0.14
SCFD2-201ENST00000388940 C19orf48Q6RUI8 117 aa14.17□□□□□ -0.14
SCFD2-201ENST00000388940 VITQ6UXI7 678 aa14.17□□□□□ -0.14
SCFD2-201ENST00000388940 TP53I13Q8NBR0 393 aaPredicted RBP14.17□□□□□ -0.14
SCFD2-201ENST00000388940 OR2L8Q8NGY9 312 aa14.17□□□□□ -0.14
SCFD2-201ENST00000388940 C12orf66Q96MD2 445 aa14.17□□□□□ -0.14
SCFD2-201ENST00000388940 DPH7Q9BTV6 452 aa14.17□□□□□ -0.14
SCFD2-201ENST00000388940 SLC25A19Q9HC21 320 aa14.17□□□□□ -0.14
SCFD2-201ENST00000388940 PHPT1Q9NRX4 125 aaPredicted RBP14.17□□□□□ -0.14
SCFD2-201ENST00000388940 CCDC59Q9P031 241 aaKnown RBP14.17□□□□□ -0.14
SCFD2-201ENST00000388940 C5AR2Q9P296 337 aa14.17□□□□□ -0.14
SCFD2-201ENST00000388940 P2RX2Q9UBL9 471 aa14.17□□□□□ -0.14
SCFD2-201ENST00000388940 PNMA8BQ9ULN7 279 aaPredicted RBP14.17□□□□□ -0.14
SCFD2-201ENST00000388940 STON1Q9Y6Q2 735 aa14.17□□□□□ -0.14
SCFD2-201ENST00000388940 DOCK9Q9BZ29 2069 aa14.17□□□□□ -0.14
SCFD2-201ENST00000388940 IGKV1-8A0A0C4DH67 115 aa14.16□□□□□ -0.14
SCFD2-201ENST00000388940 ANHXE9PGG2 379 aa14.16□□□□□ -0.14
SCFD2-201ENST00000388940 KCNJ13O60928 360 aa14.16□□□□□ -0.14
SCFD2-201ENST00000388940 SLITRK5O94991 958 aa14.16□□□□□ -0.14
SCFD2-201ENST00000388940 C5AR1P21730 350 aa14.16□□□□□ -0.14
SCFD2-201ENST00000388940 PKLRP30613 574 aa14.16□□□□□ -0.14
SCFD2-201ENST00000388940 IRF4Q15306 451 aa14.16□□□□□ -0.14
SCFD2-201ENST00000388940 DUSP6Q16828 381 aa14.16□□□□□ -0.14
SCFD2-201ENST00000388940 TMEM201Q5SNT2 666 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms