RNA–Protein interactions for RNA: ENST00000384165.1

RNU6-42P-201, Transcript of RNA, U6 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU6-42P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-42P-201ENST00000384165 TUBA1CQ9BQE3 449 aa0.77□□□□□ -2.29
RNU6-42P-201ENST00000384165 APOL2Q9BQE5 337 aa0.77□□□□□ -2.29
RNU6-42P-201ENST00000384165 MED10Q9BTT4 135 aa0.77□□□□□ -2.29
RNU6-42P-201ENST00000384165 CARD6Q9BX69 1037 aa0.77□□□□□ -2.29
RNU6-42P-201ENST00000384165 API5Q9BZZ5 524 aaKnown RBP0.77□□□□□ -2.29
RNU6-42P-201ENST00000384165 CCSER1Q9C0I3 900 aa0.77□□□□□ -2.29
RNU6-42P-201ENST00000384165 ELOVL4Q9GZR5 314 aa0.77□□□□□ -2.29
RNU6-42P-201ENST00000384165 WNT10AQ9GZT5 417 aa0.77□□□□□ -2.29
RNU6-42P-201ENST00000384165 MUC13Q9H3R2 512 aa0.77□□□□□ -2.29
RNU6-42P-201ENST00000384165 BRMS1Q9HCU9 246 aa0.77□□□□□ -2.29
RNU6-42P-201ENST00000384165 DNAJC4Q9NNZ3 241 aa0.77□□□□□ -2.29
RNU6-42P-201ENST00000384165 DYNLRB1Q9NP97 96 aa0.77□□□□□ -2.29
RNU6-42P-201ENST00000384165 EIF2B3Q9NR50 452 aaKnown RBP0.77□□□□□ -2.29
RNU6-42P-201ENST00000384165 SERTAD4Q9NUC0 356 aa0.77□□□□□ -2.29
RNU6-42P-201ENST00000384165 HPF1Q9NWY4 346 aa0.77□□□□□ -2.29
RNU6-42P-201ENST00000384165 SPHK1Q9NYA1 384 aa0.77□□□□□ -2.29
RNU6-42P-201ENST00000384165 GRHPRQ9UBQ7 328 aa0.77□□□□□ -2.29
RNU6-42P-201ENST00000384165 NIPSNAP3AQ9UFN0 247 aaPredicted RBP0.77□□□□□ -2.29
RNU6-42P-201ENST00000384165 LEF1Q9UJU2 399 aaPredicted RBP0.77□□□□□ -2.29
RNU6-42P-201ENST00000384165 POMT2Q9UKY4 750 aa0.77□□□□□ -2.29
RNU6-42P-201ENST00000384165 PCDHA4Q9UN74 947 aa0.77□□□□□ -2.29
RNU6-42P-201ENST00000384165 SAMD4AQ9UPU9 718 aaKnown RBP0.77□□□□□ -2.29
RNU6-42P-201ENST00000384165 ICKQ9UPZ9 632 aa0.77□□□□□ -2.29
RNU6-42P-201ENST00000384165 KCNK6Q9Y257 313 aa0.77□□□□□ -2.29
RNU6-42P-201ENST00000384165 SLC17A4Q9Y2C5 497 aa0.77□□□□□ -2.29
RNU6-42P-201ENST00000384165 MYRFQ9Y2G1 1151 aa0.77□□□□□ -2.29
RNU6-42P-201ENST00000384165 TMEM98Q9Y2Y6 226 aa0.77□□□□□ -2.29
RNU6-42P-201ENST00000384165 LYVE1Q9Y5Y7 322 aa0.77□□□□□ -2.29
RNU6-42P-201ENST00000384165 MAU2Q9Y6X3 613 aa0.77□□□□□ -2.29
RNU6-42P-201ENST00000384165 TTC41PQ6P2S7 1318 aa0.77□□□□□ -2.29
RNU6-42P-201ENST00000384165 IGHV3-20A0A0C4DH32 117 aa0.76□□□□□ -2.29
RNU6-42P-201ENST00000384165 A0A0J9YXV3 536 aa0.76□□□□□ -2.29
RNU6-42P-201ENST00000384165 NBDYA0A0U1RRE5 68 aa0.76□□□□□ -2.29
RNU6-42P-201ENST00000384165 CCDC196A0A1B0GTZ2 297 aa0.76□□□□□ -2.29
RNU6-42P-201ENST00000384165 A0A1W2PQH9 124 aa0.76□□□□□ -2.29
RNU6-42P-201ENST00000384165 SHISA3A0PJX4 238 aa0.76□□□□□ -2.29
RNU6-42P-201ENST00000384165 MEIOCA2RUB1 952 aa0.76□□□□□ -2.29
RNU6-42P-201ENST00000384165 OR6C74A6NCV1 312 aa0.76□□□□□ -2.29
RNU6-42P-201ENST00000384165 GOLGA6CA6NDK9 693 aa0.76□□□□□ -2.29
RNU6-42P-201ENST00000384165 GOLGA6BA6NDN3 693 aa0.76□□□□□ -2.29
RNU6-42P-201ENST00000384165 OR5K3A6NET4 321 aa0.76□□□□□ -2.29
RNU6-42P-201ENST00000384165 FAM187AA6NFU0 413 aa0.76□□□□□ -2.29
RNU6-42P-201ENST00000384165 PDZK1P1A8MUH7 402 aa0.76□□□□□ -2.29
RNU6-42P-201ENST00000384165 GOLIM4O00461 696 aa0.76□□□□□ -2.29
RNU6-42P-201ENST00000384165 FBP2O00757 339 aa0.76□□□□□ -2.29
RNU6-42P-201ENST00000384165 PPEF2O14830 753 aa0.76□□□□□ -2.29
RNU6-42P-201ENST00000384165 PHYHO14832 338 aa0.76□□□□□ -2.29
RNU6-42P-201ENST00000384165 KLF11O14901 512 aa0.76□□□□□ -2.29
RNU6-42P-201ENST00000384165 CLGNO14967 610 aa0.76□□□□□ -2.29
RNU6-42P-201ENST00000384165 SPTLC2O15270 562 aa0.76□□□□□ -2.29
RNU6-42P-201ENST00000384165 EPB41L2O43491 1005 aaKnown RBP0.76□□□□□ -2.29
RNU6-42P-201ENST00000384165 SOX15O60248 233 aa0.76□□□□□ -2.29
RNU6-42P-201ENST00000384165 GAS7O60861 476 aa0.76□□□□□ -2.29
RNU6-42P-201ENST00000384165 CLEC3AO75596 197 aa0.76□□□□□ -2.29
RNU6-42P-201ENST00000384165 FAM13AO94988 1023 aa0.76□□□□□ -2.29
RNU6-42P-201ENST00000384165 WISP3O95389 354 aaPredicted RBP0.76□□□□□ -2.29
RNU6-42P-201ENST00000384165 ACSL3O95573 720 aa0.76□□□□□ -2.29
RNU6-42P-201ENST00000384165 NDST3O95803 873 aa0.76□□□□□ -2.29
RNU6-42P-201ENST00000384165 LATS1O95835 1130 aa0.76□□□□□ -2.29
RNU6-42P-201ENST00000384165 SYF2O95926 243 aaKnown RBP0.76□□□□□ -2.29
RNU6-42P-201ENST00000384165 PDYNP01213 254 aa0.76□□□□□ -2.29
RNU6-42P-201ENST00000384165 IGLV2-8P01709 118 aa0.76□□□□□ -2.29
RNU6-42P-201ENST00000384165 IGHV2-5P01817 119 aa0.76□□□□□ -2.29
RNU6-42P-201ENST00000384165 IGHMP01871 453 aa0.76□□□□□ -2.29
RNU6-42P-201ENST00000384165 CLTAP09496 248 aa0.76□□□□□ -2.29
RNU6-42P-201ENST00000384165 GOLGA6DP0CG33 693 aa0.76□□□□□ -2.29
RNU6-42P-201ENST00000384165 ERVK-10P10266 1014 aa0.76□□□□□ -2.29
RNU6-42P-201ENST00000384165 PLS3P13797 630 aa0.76□□□□□ -2.29
RNU6-42P-201ENST00000384165 CPN1P15169 458 aa0.76□□□□□ -2.29
RNU6-42P-201ENST00000384165 BRD2P25440 801 aaKnown RBP0.76□□□□□ -2.29
RNU6-42P-201ENST00000384165 GNA15P30679 374 aa0.76□□□□□ -2.29
RNU6-42P-201ENST00000384165 BMI1P35226 326 aa0.76□□□□□ -2.29
RNU6-42P-201ENST00000384165 ADD2P35612 726 aa0.76□□□□□ -2.29
RNU6-42P-201ENST00000384165 HSD17B3P37058 310 aa0.76□□□□□ -2.29
RNU6-42P-201ENST00000384165 ARL1P40616 181 aaPredicted RBP0.76□□□□□ -2.29
RNU6-42P-201ENST00000384165 PNPLA4P41247 253 aa0.76□□□□□ -2.29
RNU6-42P-201ENST00000384165 SLC1A3P43003 542 aa0.76□□□□□ -2.29
RNU6-42P-201ENST00000384165 SYKP43405 635 aa0.76□□□□□ -2.29
RNU6-42P-201ENST00000384165 SLC6A8P48029 635 aa0.76□□□□□ -2.29
RNU6-42P-201ENST00000384165 GABRA4P48169 554 aa0.76□□□□□ -2.29
RNU6-42P-201ENST00000384165 EFNA5P52803 228 aa0.76□□□□□ -2.29
RNU6-42P-201ENST00000384165 PRSS12P56730 875 aa0.76□□□□□ -2.29
RNU6-42P-201ENST00000384165 ERVFC1-1P60608 527 aa0.76□□□□□ -2.29
RNU6-42P-201ENST00000384165 PSMC1P62191 440 aaKnown RBP0.76□□□□□ -2.29
RNU6-42P-201ENST00000384165 RPS24P62847 133 aaKnown RBP0.76□□□□□ -2.29
RNU6-42P-201ENST00000384165 CDK3Q00526 305 aa0.76□□□□□ -2.29
RNU6-42P-201ENST00000384165 NAAAQ02083 359 aa0.76□□□□□ -2.29
RNU6-42P-201ENST00000384165 CALD1Q05682 793 aaKnown RBP0.76□□□□□ -2.29
RNU6-42P-201ENST00000384165 GTF2H3Q13889 308 aa0.76□□□□□ -2.29
RNU6-42P-201ENST00000384165 PPA1Q15181 289 aa0.76□□□□□ -2.29
RNU6-42P-201ENST00000384165 STK11Q15831 433 aa0.76□□□□□ -2.29
RNU6-42P-201ENST00000384165 UBE2SQ16763 222 aa0.76□□□□□ -2.29
RNU6-42P-201ENST00000384165 ACOT6Q3I5F7 207 aaPredicted RBP0.76□□□□□ -2.29
RNU6-42P-201ENST00000384165 CCDC14Q49A88 953 aa0.76□□□□□ -2.29
RNU6-42P-201ENST00000384165 MINDY4Q4G0A6 757 aa0.76□□□□□ -2.29
RNU6-42P-201ENST00000384165 CARD16Q5EG05 197 aa0.76□□□□□ -2.29
RNU6-42P-201ENST00000384165 RNASE12Q5GAN4 147 aaKnown RBP0.76□□□□□ -2.29
RNU6-42P-201ENST00000384165 AVPI1Q5T686 147 aa0.76□□□□□ -2.29
RNU6-42P-201ENST00000384165 ERMARDQ5T6L9 678 aa0.76□□□□□ -2.29
RNU6-42P-201ENST00000384165 ANKRD45Q5TZF3 282 aa0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms