RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 MACROD1Q9BQ69 325 aa13.55□□□□□ -0.24
CLCN4-201ENST00000380829 AMBRA1Q9C0C7 1298 aa13.55□□□□□ -0.24
CLCN4-201ENST00000380829 LHX9Q9NQ69 397 aa13.55□□□□□ -0.24
CLCN4-201ENST00000380829 AASSQ9UDR5 926 aa13.55□□□□□ -0.24
CLCN4-201ENST00000380829 TBC1D29Q9UFV1 150 aa13.55□□□□□ -0.24
CLCN4-201ENST00000380829 SCML1Q9UN30 329 aa13.55□□□□□ -0.24
CLCN4-201ENST00000380829 TCRBV21S2A2A0A5A6 115 aa13.55□□□□□ -0.24
CLCN4-201ENST00000380829 FKBP9O95302 570 aa13.55□□□□□ -0.24
CLCN4-201ENST00000380829 ASGR2P07307 311 aa13.55□□□□□ -0.24
CLCN4-201ENST00000380829 PPIBP23284 216 aaKnown RBP13.55□□□□□ -0.24
CLCN4-201ENST00000380829 IFNA8P32881 189 aa13.55□□□□□ -0.24
CLCN4-201ENST00000380829 SOAT1P35610 550 aa13.55□□□□□ -0.24
CLCN4-201ENST00000380829 RPL3P39023 403 aaKnown RBP13.55□□□□□ -0.24
CLCN4-201ENST00000380829 DCTP40126 519 aa13.55□□□□□ -0.24
CLCN4-201ENST00000380829 TPMTP51580 245 aa13.55□□□□□ -0.24
CLCN4-201ENST00000380829 CRYBA2P53672 197 aa13.55□□□□□ -0.24
CLCN4-201ENST00000380829 P2RX3P56373 397 aa13.55□□□□□ -0.24
CLCN4-201ENST00000380829 LAPTM4AQ15012 233 aa13.55□□□□□ -0.24
CLCN4-201ENST00000380829 USP30Q70CQ3 517 aa13.55□□□□□ -0.24
CLCN4-201ENST00000380829 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.55□□□□□ -0.24
CLCN4-201ENST00000380829 SLC44A3Q8N4M1 653 aa13.55□□□□□ -0.24
CLCN4-201ENST00000380829 FLCNQ8NFG4 579 aa13.55□□□□□ -0.24
CLCN4-201ENST00000380829 OR2L8Q8NGY9 312 aa13.55□□□□□ -0.24
CLCN4-201ENST00000380829 GOT1L1Q8NHS2 421 aaPredicted RBP13.55□□□□□ -0.24
CLCN4-201ENST00000380829 CCL4L1Q8NHW4 92 aa13.55□□□□□ -0.24
CLCN4-201ENST00000380829 PHF10Q8WUB8 498 aaKnown RBP13.55□□□□□ -0.24
CLCN4-201ENST00000380829 TSACCQ96A04 125 aaPredicted RBP13.55□□□□□ -0.24
CLCN4-201ENST00000380829 MBOAT4Q96T53 435 aa13.55□□□□□ -0.24
CLCN4-201ENST00000380829 CORO2BQ9UQ03 480 aa13.55□□□□□ -0.24
CLCN4-201ENST00000380829 GOLGA4Q13439 2230 aaKnown RBP13.55□□□□□ -0.24
CLCN4-201ENST00000380829 A0A1W2PRB8 838 aa13.54□□□□□ -0.24
CLCN4-201ENST00000380829 NDUFS4O43181 175 aa13.54□□□□□ -0.24
CLCN4-201ENST00000380829 SEMA3DO95025 777 aa13.54□□□□□ -0.24
CLCN4-201ENST00000380829 IGFBP4P22692 258 aa13.54□□□□□ -0.24
CLCN4-201ENST00000380829 PRKACBP22694 351 aa13.54□□□□□ -0.24
CLCN4-201ENST00000380829 MAGEA2P43356 314 aa13.54□□□□□ -0.24
CLCN4-201ENST00000380829 MRPS21P82921 87 aaKnown RBP13.54□□□□□ -0.24
CLCN4-201ENST00000380829 VLDLRP98155 873 aa13.54□□□□□ -0.24
CLCN4-201ENST00000380829 LRRC74AQ0VAA2 488 aa13.54□□□□□ -0.24
CLCN4-201ENST00000380829 CCBE1Q6UXH8 406 aaPredicted RBP13.54□□□□□ -0.24
CLCN4-201ENST00000380829 IKBIPQ70UQ0 350 aa13.54□□□□□ -0.24
CLCN4-201ENST00000380829 NLGN4XQ8N0W4 816 aa13.54□□□□□ -0.24
CLCN4-201ENST00000380829 AMER3Q8N944 861 aa13.54□□□□□ -0.24
CLCN4-201ENST00000380829 SPERTQ8NA61 448 aa13.54□□□□□ -0.24
CLCN4-201ENST00000380829 CNIH3Q8TBE1 160 aa13.54□□□□□ -0.24
CLCN4-201ENST00000380829 NACC2Q96BF6 587 aa13.54□□□□□ -0.24
CLCN4-201ENST00000380829 TM4SF18Q96CE8 201 aa13.54□□□□□ -0.24
CLCN4-201ENST00000380829 SCARF2Q96GP6 870 aaPredicted RBP13.54□□□□□ -0.24
CLCN4-201ENST00000380829 TMEM246Q9BRR3 403 aa13.54□□□□□ -0.24
CLCN4-201ENST00000380829 MRPS30Q9NP92 439 aaKnown RBP13.54□□□□□ -0.24
CLCN4-201ENST00000380829 SPHK1Q9NYA1 384 aa13.54□□□□□ -0.24
CLCN4-201ENST00000380829 TAS2R9Q9NYW1 312 aa13.54□□□□□ -0.24
CLCN4-201ENST00000380829 CRNNQ9UBG3 495 aaPredicted RBP13.54□□□□□ -0.24
CLCN4-201ENST00000380829 RPS6KA6Q9UK32 745 aa13.54□□□□□ -0.24
CLCN4-201ENST00000380829 KLHL20Q9Y2M5 609 aa13.54□□□□□ -0.24
CLCN4-201ENST00000380829 MAP4K5Q9Y4K4 846 aa13.54□□□□□ -0.24
CLCN4-201ENST00000380829 MAU2Q9Y6X3 613 aa13.54□□□□□ -0.24
CLCN4-201ENST00000380829 COL4A2P08572 1712 aa13.54□□□□□ -0.24
CLCN4-201ENST00000380829 TRBV23OR9-2A0A075B6M9 112 aa13.54□□□□□ -0.24
CLCN4-201ENST00000380829 CAPN5O15484 640 aaPredicted RBP13.54□□□□□ -0.24
CLCN4-201ENST00000380829 NARSO43776 548 aaKnown RBP13.54□□□□□ -0.24
CLCN4-201ENST00000380829 CHI3L1P36222 383 aaPredicted RBP13.54□□□□□ -0.24
CLCN4-201ENST00000380829 GNG2P59768 71 aa13.54□□□□□ -0.24
CLCN4-201ENST00000380829 PPP2R2BQ00005 443 aa13.54□□□□□ -0.24
CLCN4-201ENST00000380829 VEZF1Q14119 521 aa13.54□□□□□ -0.24
CLCN4-201ENST00000380829 SLC5A12Q1EHB4 618 aa13.54□□□□□ -0.24
CLCN4-201ENST00000380829 CBLL1Q75N03 491 aa13.54□□□□□ -0.24
CLCN4-201ENST00000380829 P2RY8Q86VZ1 359 aa13.54□□□□□ -0.24
CLCN4-201ENST00000380829 RNF130Q86XS8 419 aa13.54□□□□□ -0.24
CLCN4-201ENST00000380829 PGBD3Q8N328 593 aa13.54□□□□□ -0.24
CLCN4-201ENST00000380829 SVOPLQ8N434 492 aa13.54□□□□□ -0.24
CLCN4-201ENST00000380829 FBXL6Q8N531 539 aa13.54□□□□□ -0.24
CLCN4-201ENST00000380829 OR6F1Q8NGZ6 308 aa13.54□□□□□ -0.24
CLCN4-201ENST00000380829 OR5K1Q8NHB7 308 aa13.54□□□□□ -0.24
CLCN4-201ENST00000380829 MTERF3Q96E29 417 aa13.54□□□□□ -0.24
CLCN4-201ENST00000380829 BMFQ96LC9 184 aa13.54□□□□□ -0.24
CLCN4-201ENST00000380829 RHNO1Q9BSD3 238 aa13.54□□□□□ -0.24
CLCN4-201ENST00000380829 MVB12BQ9H7P6 319 aa13.54□□□□□ -0.24
CLCN4-201ENST00000380829 SLC6A20Q9NP91 592 aa13.54□□□□□ -0.24
CLCN4-201ENST00000380829 IL1RAPQ9NPH3 570 aa13.54□□□□□ -0.24
CLCN4-201ENST00000380829 GIMAP4Q9NUV9 329 aa13.54□□□□□ -0.24
CLCN4-201ENST00000380829 FAM118AQ9NWS6 357 aa13.54□□□□□ -0.24
CLCN4-201ENST00000380829 SNX8Q9Y5X2 465 aa13.54□□□□□ -0.24
CLCN4-201ENST00000380829 MYO1GB0I1T2 1018 aa13.53□□□□□ -0.24
CLCN4-201ENST00000380829 ERVH48-1M5A8F1 160 aa13.53□□□□□ -0.24
CLCN4-201ENST00000380829 AP3D1O14617 1153 aa13.53□□□□□ -0.24
CLCN4-201ENST00000380829 TMPRSS11DO60235 418 aa13.53□□□□□ -0.24
CLCN4-201ENST00000380829 HS6ST1O60243 411 aa13.53□□□□□ -0.24
CLCN4-201ENST00000380829 DDCP20711 480 aa13.53□□□□□ -0.24
CLCN4-201ENST00000380829 PSMB9P28065 219 aa13.53□□□□□ -0.24
CLCN4-201ENST00000380829 PEBP1P30086 187 aaKnown RBP13.53□□□□□ -0.24
CLCN4-201ENST00000380829 BCL6P41182 706 aa13.53□□□□□ -0.24
CLCN4-201ENST00000380829 GABARAPL2P60520 117 aa13.53□□□□□ -0.24
CLCN4-201ENST00000380829 EIF3MQ7L2H7 374 aaKnown RBP13.53□□□□□ -0.24
CLCN4-201ENST00000380829 UBE3DQ7Z6J8 389 aa13.53□□□□□ -0.24
CLCN4-201ENST00000380829 LACC1Q8IV20 430 aa13.53□□□□□ -0.24
CLCN4-201ENST00000380829 TMEM145Q8NBT3 493 aa13.53□□□□□ -0.24
CLCN4-201ENST00000380829 C11orf65Q8NCR3 313 aa13.53□□□□□ -0.24
CLCN4-201ENST00000380829 MCFD2Q8NI22 146 aa13.53□□□□□ -0.24
CLCN4-201ENST00000380829 HMGB4Q8WW32 186 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms