RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 DAZLQ92904 295 aaKnown RBP17.51■□□□□ 0.39
SSU72-203ENST00000378725 ABHD17AQ96GS6 310 aa17.51■□□□□ 0.39
SSU72-203ENST00000378725 THOC3Q96J01 351 aaKnown RBP17.51■□□□□ 0.39
SSU72-203ENST00000378725 EGLN2Q96KS0 407 aa17.51■□□□□ 0.39
SSU72-203ENST00000378725 ZNF681Q96N22 645 aa17.51■□□□□ 0.39
SSU72-203ENST00000378725 DGAT2Q96PD7 388 aa17.51■□□□□ 0.39
SSU72-203ENST00000378725 PELOQ9BRX2 385 aaKnown RBP17.51■□□□□ 0.39
SSU72-203ENST00000378725 ASIC5Q9NY37 505 aa17.51■□□□□ 0.39
SSU72-203ENST00000378725 TAS2R7Q9NYW3 318 aa17.51■□□□□ 0.39
SSU72-203ENST00000378725 MARCOQ9UEW3 520 aaPredicted RBP17.51■□□□□ 0.39
SSU72-203ENST00000378725 MKRN2OSH3BPM6 223 aa17.5■□□□□ 0.39
SSU72-203ENST00000378725 SDHDO14521 159 aa17.5■□□□□ 0.39
SSU72-203ENST00000378725 KLHL41O60662 606 aa17.5■□□□□ 0.39
SSU72-203ENST00000378725 CELA2AP08217 269 aa17.5■□□□□ 0.39
SSU72-203ENST00000378725 PRPS2P11908 318 aa17.5■□□□□ 0.39
SSU72-203ENST00000378725 ALDH9A1P49189 494 aa17.5■□□□□ 0.39
SSU72-203ENST00000378725 PLIN5Q00G26 463 aa17.5■□□□□ 0.39
SSU72-203ENST00000378725 MAD2L1Q13257 205 aaPredicted RBP17.5■□□□□ 0.39
SSU72-203ENST00000378725 IL23RQ5VWK5 629 aa17.5■□□□□ 0.39
SSU72-203ENST00000378725 H3F3CQ6NXT2 135 aa17.5■□□□□ 0.39
SSU72-203ENST00000378725 FNDC5Q8NAU1 212 aa17.5■□□□□ 0.39
SSU72-203ENST00000378725 MORN4Q8NDC4 146 aa17.5■□□□□ 0.39
SSU72-203ENST00000378725 B3GNT7Q8NFL0 401 aa17.5■□□□□ 0.39
SSU72-203ENST00000378725 OR14A16Q8NHC5 309 aa17.5■□□□□ 0.39
SSU72-203ENST00000378725 PPWD1Q96BP3 646 aaKnown RBP17.5■□□□□ 0.39
SSU72-203ENST00000378725 MAELQ96JY0 434 aaKnown RBP17.5■□□□□ 0.39
SSU72-203ENST00000378725 PPP1R36Q96LQ0 422 aa17.5■□□□□ 0.39
SSU72-203ENST00000378725 SMAD5Q99717 465 aaKnown RBP17.5■□□□□ 0.39
SSU72-203ENST00000378725 SLC25A23Q9BV35 468 aa17.5■□□□□ 0.39
SSU72-203ENST00000378725 NUDT9Q9BW91 350 aa17.5■□□□□ 0.39
SSU72-203ENST00000378725 ZNF552Q9H707 407 aaPredicted RBP17.5■□□□□ 0.39
SSU72-203ENST00000378725 C5AR2Q9P296 337 aa17.5■□□□□ 0.39
SSU72-203ENST00000378725 BAIAP2L1Q9UHR4 511 aa17.5■□□□□ 0.39
SSU72-203ENST00000378725 UTS2RQ9UKP6 389 aa17.5■□□□□ 0.39
SSU72-203ENST00000378725 CLCA3PQ9Y6N3 262 aa17.5■□□□□ 0.39
SSU72-203ENST00000378725 DSPP15924 2871 aaKnown RBP17.5■□□□□ 0.39
SSU72-203ENST00000378725 A0A1W2PS29 197 aa17.49■□□□□ 0.39
SSU72-203ENST00000378725 C17orf105B2RV13 164 aa17.49■□□□□ 0.39
SSU72-203ENST00000378725 ATXN7O15265 892 aaPredicted RBP17.49■□□□□ 0.39
SSU72-203ENST00000378725 ITGAMP11215 1152 aa17.49■□□□□ 0.39
SSU72-203ENST00000378725 SFTPCP11686 197 aa17.49■□□□□ 0.39
SSU72-203ENST00000378725 CPMP14384 443 aa17.49■□□□□ 0.39
SSU72-203ENST00000378725 PORP16435 677 aaPredicted RBP17.49■□□□□ 0.39
SSU72-203ENST00000378725 TNNI3P19429 210 aa17.49■□□□□ 0.39
SSU72-203ENST00000378725 CSNK2A2P19784 350 aaPredicted RBP17.49■□□□□ 0.39
SSU72-203ENST00000378725 ASMTP46597 345 aa17.49■□□□□ 0.39
SSU72-203ENST00000378725 ERVK-8P63133 956 aa17.49■□□□□ 0.39
SSU72-203ENST00000378725 CEBPEQ15744 281 aa17.49■□□□□ 0.39
SSU72-203ENST00000378725 ZNF750Q32MQ0 723 aa17.49■□□□□ 0.39
SSU72-203ENST00000378725 TCTN3Q6NUS6 607 aa17.49■□□□□ 0.39
SSU72-203ENST00000378725 DGAT2L6Q6ZPD8 337 aa17.49■□□□□ 0.39
SSU72-203ENST00000378725 MAVSQ7Z434 540 aa17.49■□□□□ 0.39
SSU72-203ENST00000378725 APCDD1LQ8NCL9 501 aa17.49■□□□□ 0.39
SSU72-203ENST00000378725 CNRIP1Q96F85 164 aaPredicted RBP17.49■□□□□ 0.39
SSU72-203ENST00000378725 ZNF764Q96H86 408 aaPredicted RBP17.49■□□□□ 0.39
SSU72-203ENST00000378725 SEMA4CQ9C0C4 833 aa17.49■□□□□ 0.39
SSU72-203ENST00000378725 GPR83Q9NYM4 423 aa17.49■□□□□ 0.39
SSU72-203ENST00000378725 EIF3LQ9Y262 564 aaKnown RBP17.49■□□□□ 0.39
SSU72-203ENST00000378725 PCDHGB7Q9Y5F8 929 aa17.49■□□□□ 0.39
SSU72-203ENST00000378725 ZNF780BQ9Y6R6 833 aa17.49■□□□□ 0.39
SSU72-203ENST00000378725 LOC400499M0QZD8 3231 aa17.48■□□□□ 0.39
SSU72-203ENST00000378725 OR10H2O60403 315 aa17.48■□□□□ 0.39
SSU72-203ENST00000378725 TBX19O60806 448 aa17.48■□□□□ 0.39
SSU72-203ENST00000378725 ERAL1O75616 437 aaKnown RBP17.48■□□□□ 0.39
SSU72-203ENST00000378725 TGDSO95455 350 aa17.48■□□□□ 0.39
SSU72-203ENST00000378725 DDAH2O95865 285 aa17.48■□□□□ 0.39
SSU72-203ENST00000378725 COX7A2P14406 83 aa17.48■□□□□ 0.39
SSU72-203ENST00000378725 LBPP18428 481 aa17.48■□□□□ 0.39
SSU72-203ENST00000378725 PRSS53Q2L4Q9 553 aa17.48■□□□□ 0.39
SSU72-203ENST00000378725 SPRED3Q2MJR0 410 aa17.48■□□□□ 0.39
SSU72-203ENST00000378725 VWA5B1Q5TIE3 1220 aa17.48■□□□□ 0.39
SSU72-203ENST00000378725 OGFOD2Q6N063 350 aa17.48■□□□□ 0.39
SSU72-203ENST00000378725 TICAM1Q8IUC6 712 aa17.48■□□□□ 0.39
SSU72-203ENST00000378725 SAMD14Q8IZD0 417 aaPredicted RBP17.48■□□□□ 0.39
SSU72-203ENST00000378725 LIX1Q8N485 282 aa17.48■□□□□ 0.39
SSU72-203ENST00000378725 BRIX1Q8TDN6 353 aaKnown RBP17.48■□□□□ 0.39
SSU72-203ENST00000378725 KLHL29Q96CT2 875 aa17.48■□□□□ 0.39
SSU72-203ENST00000378725 TSSK3Q96PN8 268 aa17.48■□□□□ 0.39
SSU72-203ENST00000378725 C1orf50Q9BV19 199 aa17.48■□□□□ 0.39
SSU72-203ENST00000378725 SLC35C2Q9NQQ7 365 aa17.48■□□□□ 0.39
SSU72-203ENST00000378725 NOP53Q9NZM5 478 aaKnown RBP17.48■□□□□ 0.39
SSU72-203ENST00000378725 G3BP2Q9UN86 482 aaKnown RBP17.48■□□□□ 0.39
SSU72-203ENST00000378725 USH1CQ9Y6N9 552 aa17.48■□□□□ 0.39
SSU72-203ENST00000378725 CACNA1BQ00975 2339 aa17.47■□□□□ 0.39
SSU72-203ENST00000378725 ATP1B1P05026 303 aa17.47■□□□□ 0.39
SSU72-203ENST00000378725 SOX11P35716 441 aa17.47■□□□□ 0.39
SSU72-203ENST00000378725 FEN1P39748 380 aaKnown RBP17.47■□□□□ 0.39
SSU72-203ENST00000378725 RAPSNQ13702 412 aa17.47■□□□□ 0.39
SSU72-203ENST00000378725 PDE7AQ13946 482 aa17.47■□□□□ 0.39
SSU72-203ENST00000378725 CRB2Q5IJ48 1285 aa17.47■□□□□ 0.39
SSU72-203ENST00000378725 AGAP7PQ5VUJ5 663 aa17.47■□□□□ 0.39
SSU72-203ENST00000378725 IRAK1BP1Q5VVH5 260 aa17.47■□□□□ 0.39
SSU72-203ENST00000378725 EPGNQ6UW88 154 aa17.47■□□□□ 0.39
SSU72-203ENST00000378725 OR1N1Q8NGS0 311 aa17.47■□□□□ 0.39
SSU72-203ENST00000378725 CDC26Q8NHZ8 85 aa17.47■□□□□ 0.39
SSU72-203ENST00000378725 SLC2A12Q8TD20 617 aa17.47■□□□□ 0.39
SSU72-203ENST00000378725 ACTRT2Q8TDY3 377 aa17.47■□□□□ 0.39
SSU72-203ENST00000378725 ZNF721Q8TF20 911 aa17.47■□□□□ 0.39
SSU72-203ENST00000378725 RIT1Q92963 219 aa17.47■□□□□ 0.39
SSU72-203ENST00000378725 NCLNQ969V3 563 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms