RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 RAPSNQ13702 412 aa13.5□□□□□ -0.25
SHROOM1-203ENST00000378679 ENPP2Q13822 863 aa13.5□□□□□ -0.25
SHROOM1-203ENST00000378679 SYT16Q17RD7 645 aa13.5□□□□□ -0.25
SHROOM1-203ENST00000378679 P2RY8Q86VZ1 359 aa13.5□□□□□ -0.25
SHROOM1-203ENST00000378679 ZNF671Q8TAW3 534 aa13.5□□□□□ -0.25
SHROOM1-203ENST00000378679 UBTD2Q8WUN7 234 aa13.5□□□□□ -0.25
SHROOM1-203ENST00000378679 SLC29A1Q99808 456 aa13.5□□□□□ -0.25
SHROOM1-203ENST00000378679 SUSD2Q9UGT4 822 aa13.5□□□□□ -0.25
SHROOM1-203ENST00000378679 PARP14Q460N5 1801 aa13.5□□□□□ -0.25
SHROOM1-203ENST00000378679 TRBV5-4A0A0C4DH59 114 aa13.5□□□□□ -0.25
SHROOM1-203ENST00000378679 GRXCR2A6NFK2 248 aa13.5□□□□□ -0.25
SHROOM1-203ENST00000378679 APBB3O95704 486 aa13.5□□□□□ -0.25
SHROOM1-203ENST00000378679 CH25HO95992 272 aa13.5□□□□□ -0.25
SHROOM1-203ENST00000378679 TFAP2AP05549 437 aa13.5□□□□□ -0.25
SHROOM1-203ENST00000378679 GRK6P43250 576 aa13.5□□□□□ -0.25
SHROOM1-203ENST00000378679 EPHA5P54756 1037 aa13.5□□□□□ -0.25
SHROOM1-203ENST00000378679 CSNK2BP67870 215 aa13.5□□□□□ -0.25
SHROOM1-203ENST00000378679 TUBB3Q13509 450 aa13.5□□□□□ -0.25
SHROOM1-203ENST00000378679 DEFB133Q30KQ1 61 aa13.5□□□□□ -0.25
SHROOM1-203ENST00000378679 TTLL10Q6ZVT0 673 aa13.5□□□□□ -0.25
SHROOM1-203ENST00000378679 TRIM46Q7Z4K8 759 aa13.5□□□□□ -0.25
SHROOM1-203ENST00000378679 OR2L5Q8NG80 312 aa13.5□□□□□ -0.25
SHROOM1-203ENST00000378679 FNDC8Q8TC99 324 aa13.5□□□□□ -0.25
SHROOM1-203ENST00000378679 RFKQ969G6 155 aa13.5□□□□□ -0.25
SHROOM1-203ENST00000378679 MOAP1Q96BY2 351 aa13.5□□□□□ -0.25
SHROOM1-203ENST00000378679 RPP25Q9BUL9 199 aaKnown RBP13.5□□□□□ -0.25
SHROOM1-203ENST00000378679 ADAM30Q9UKF2 790 aa13.5□□□□□ -0.25
SHROOM1-203ENST00000378679 SATB2Q9UPW6 733 aa13.5□□□□□ -0.25
SHROOM1-203ENST00000378679 LIPT1Q9Y234 373 aa13.5□□□□□ -0.25
SHROOM1-203ENST00000378679 KIR2DS5A0A0G2JLQ3 304 aa13.5□□□□□ -0.25
SHROOM1-203ENST00000378679 A0A0G2JNG1 304 aa13.5□□□□□ -0.25
SHROOM1-203ENST00000378679 CLDN25C9JDP6 229 aa13.5□□□□□ -0.25
SHROOM1-203ENST00000378679 ANHXE9PGG2 379 aa13.5□□□□□ -0.25
SHROOM1-203ENST00000378679 KIR2DS3K7RE56 304 aa13.5□□□□□ -0.25
SHROOM1-203ENST00000378679 SOCS2O14508 198 aa13.5□□□□□ -0.25
SHROOM1-203ENST00000378679 CD160O95971 181 aa13.5□□□□□ -0.25
SHROOM1-203ENST00000378679 PORP16435 677 aaPredicted RBP13.5□□□□□ -0.25
SHROOM1-203ENST00000378679 NPPBP16860 134 aa13.5□□□□□ -0.25
SHROOM1-203ENST00000378679 CD38P28907 300 aa13.5□□□□□ -0.25
SHROOM1-203ENST00000378679 KIR2DS5Q14953 304 aa13.5□□□□□ -0.25
SHROOM1-203ENST00000378679 TAB1Q15750 504 aa13.5□□□□□ -0.25
SHROOM1-203ENST00000378679 GGTA1PQ4G0N0 100 aa13.5□□□□□ -0.25
SHROOM1-203ENST00000378679 KIAA1614Q5VZ46 1190 aa13.5□□□□□ -0.25
SHROOM1-203ENST00000378679 ADGRG5Q8IZF4 528 aa13.5□□□□□ -0.25
SHROOM1-203ENST00000378679 PSD4Q8NDX1 1056 aa13.5□□□□□ -0.25
SHROOM1-203ENST00000378679 TEX37Q96LM6 180 aa13.5□□□□□ -0.25
SHROOM1-203ENST00000378679 PLEKHM1Q9Y4G2 1056 aa13.5□□□□□ -0.25
SHROOM1-203ENST00000378679 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.49□□□□□ -0.25
SHROOM1-203ENST00000378679 POM121BA6NF01 834 aa13.49□□□□□ -0.25
SHROOM1-203ENST00000378679 DUX1O43812 170 aa13.49□□□□□ -0.25
SHROOM1-203ENST00000378679 HCN1O60741 890 aa13.49□□□□□ -0.25
SHROOM1-203ENST00000378679 SEMA3DO95025 777 aa13.49□□□□□ -0.25
SHROOM1-203ENST00000378679 DDCP20711 480 aa13.49□□□□□ -0.25
SHROOM1-203ENST00000378679 ANKDD1AQ495B1 522 aa13.49□□□□□ -0.25
SHROOM1-203ENST00000378679 BCL7AQ4VC05 210 aa13.49□□□□□ -0.25
SHROOM1-203ENST00000378679 TMEM215Q68D42 235 aa13.49□□□□□ -0.25
SHROOM1-203ENST00000378679 TECPR1Q7Z6L1 1165 aa13.49□□□□□ -0.25
SHROOM1-203ENST00000378679 AKAP14Q86UN6 197 aa13.49□□□□□ -0.25
SHROOM1-203ENST00000378679 TMEFF1Q8IYR6 380 aa13.49□□□□□ -0.25
SHROOM1-203ENST00000378679 C19orf18Q8NEA5 215 aa13.49□□□□□ -0.25
SHROOM1-203ENST00000378679 PEX11GQ96HA9 241 aa13.49□□□□□ -0.25
SHROOM1-203ENST00000378679 FAM129BQ96TA1 746 aa13.49□□□□□ -0.25
SHROOM1-203ENST00000378679 BTNL2Q9UIR0 455 aa13.49□□□□□ -0.25
SHROOM1-203ENST00000378679 MKLN1Q9UL63 735 aa13.49□□□□□ -0.25
SHROOM1-203ENST00000378679 NEU3Q9UQ49 428 aa13.49□□□□□ -0.25
SHROOM1-203ENST00000378679 CFL2Q9Y281 166 aa13.49□□□□□ -0.25
SHROOM1-203ENST00000378679 GVINP1Q7Z2Y8 2422 aa13.49□□□□□ -0.25
SHROOM1-203ENST00000378679 FAM221BA6H8Z2 402 aa13.49□□□□□ -0.25
SHROOM1-203ENST00000378679 ZNF821O75541 412 aaPredicted RBP13.49□□□□□ -0.25
SHROOM1-203ENST00000378679 TSPAN12O95859 305 aa13.49□□□□□ -0.25
SHROOM1-203ENST00000378679 SLC5A2P31639 672 aa13.49□□□□□ -0.25
SHROOM1-203ENST00000378679 CLCN2P51788 898 aa13.49□□□□□ -0.25
SHROOM1-203ENST00000378679 CAMK1Q14012 370 aa13.49□□□□□ -0.25
SHROOM1-203ENST00000378679 ZNF846Q147U1 533 aa13.49□□□□□ -0.25
SHROOM1-203ENST00000378679 TMEM53Q6P2H8 277 aa13.49□□□□□ -0.25
SHROOM1-203ENST00000378679 UGT2A3Q6UWM9 527 aa13.49□□□□□ -0.25
SHROOM1-203ENST00000378679 ANKFN1Q8N957 763 aa13.49□□□□□ -0.25
SHROOM1-203ENST00000378679 OR56A3Q8NH54 315 aa13.49□□□□□ -0.25
SHROOM1-203ENST00000378679 PHOSPHO1Q8TCT1 267 aa13.49□□□□□ -0.25
SHROOM1-203ENST00000378679 TESCQ96BS2 214 aa13.49□□□□□ -0.25
SHROOM1-203ENST00000378679 YTHDF1Q9BYJ9 559 aaKnown RBP13.49□□□□□ -0.25
SHROOM1-203ENST00000378679 ACTL8Q9H568 366 aa13.49□□□□□ -0.25
SHROOM1-203ENST00000378679 MKKSQ9NPJ1 570 aaPredicted RBP13.49□□□□□ -0.25
SHROOM1-203ENST00000378679 SACM1LQ9NTJ5 587 aa13.49□□□□□ -0.25
SHROOM1-203ENST00000378679 DNAH12Q6ZR08 3092 aa13.49□□□□□ -0.25
SHROOM1-203ENST00000378679 IRGMA1A4Y4 181 aa13.49□□□□□ -0.25
SHROOM1-203ENST00000378679 ELOA3DA6NLF2 546 aaPredicted RBP13.49□□□□□ -0.25
SHROOM1-203ENST00000378679 A8MV72 311 aaPredicted RBP13.49□□□□□ -0.25
SHROOM1-203ENST00000378679 ZNF195O14628 629 aa13.49□□□□□ -0.25
SHROOM1-203ENST00000378679 AREL1O15033 823 aa13.49□□□□□ -0.25
SHROOM1-203ENST00000378679 RASAL1O95294 804 aa13.49□□□□□ -0.25
SHROOM1-203ENST00000378679 RETP07949 1114 aa13.49□□□□□ -0.25
SHROOM1-203ENST00000378679 BMP2P12643 396 aa13.49□□□□□ -0.25
SHROOM1-203ENST00000378679 AGXTP21549 392 aa13.49□□□□□ -0.25
SHROOM1-203ENST00000378679 IL12AP29459 219 aa13.49□□□□□ -0.25
SHROOM1-203ENST00000378679 TPMTP51580 245 aa13.49□□□□□ -0.25
SHROOM1-203ENST00000378679 MYBPC1Q00872 1141 aa13.49□□□□□ -0.25
SHROOM1-203ENST00000378679 DECR1Q16698 335 aa13.49□□□□□ -0.25
SHROOM1-203ENST00000378679 ELOA3BQ3SY89 546 aa13.49□□□□□ -0.25
SHROOM1-203ENST00000378679 FAM220AQ7Z4H9 259 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms