RNA–Protein interactions for RNA: ENST00000378536.4

SKI-201, Transcript of SKI proto-oncogene, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKI, Length 5,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-201ENST00000378536 HTRA4P83105 476 aaPredicted RBP20.2■□□□□ 0.82
SKI-201ENST00000378536 IL18R1Q13478 541 aa20.2■□□□□ 0.82
SKI-201ENST00000378536 KCNS3Q9BQ31 491 aa20.2■□□□□ 0.82
SKI-201ENST00000378536 LRIT1Q9P2V4 623 aa20.2■□□□□ 0.82
SKI-201ENST00000378536 SEMA3DO95025 777 aa20.19■□□□□ 0.82
SKI-201ENST00000378536 NPTX1Q15818 432 aa20.19■□□□□ 0.82
SKI-201ENST00000378536 RNF220Q5VTB9 566 aa20.19■□□□□ 0.82
SKI-201ENST00000378536 OSTF1Q92882 214 aa20.19■□□□□ 0.82
SKI-201ENST00000378536 SLC7A6OSQ96CW6 309 aaPredicted RBP20.19■□□□□ 0.82
SKI-201ENST00000378536 POLR2J2Q9GZM3 115 aaKnown RBP20.19■□□□□ 0.82
SKI-201ENST00000378536 TMEM168Q9H0V1 697 aa20.19■□□□□ 0.82
SKI-201ENST00000378536 CH25HO95992 272 aa20.19■□□□□ 0.82
SKI-201ENST00000378536 HSD17B1P14061 328 aa20.19■□□□□ 0.82
SKI-201ENST00000378536 P4HA3Q7Z4N8 544 aa20.19■□□□□ 0.82
SKI-201ENST00000378536 DEFB123Q8N688 67 aa20.19■□□□□ 0.82
SKI-201ENST00000378536 TMCO6Q96DC7 493 aa20.19■□□□□ 0.82
SKI-201ENST00000378536 TOR3AQ9H497 397 aa20.19■□□□□ 0.82
SKI-201ENST00000378536 SCO2O43819 266 aa20.19■□□□□ 0.82
SKI-201ENST00000378536 KHDRBS3O75525 346 aaKnown RBP20.19■□□□□ 0.82
SKI-201ENST00000378536 ECDO95905 644 aaPredicted RBP20.19■□□□□ 0.82
SKI-201ENST00000378536 NR2C1P13056 603 aa20.19■□□□□ 0.82
SKI-201ENST00000378536 GGT1P19440 569 aa20.19■□□□□ 0.82
SKI-201ENST00000378536 CD47Q08722 323 aa20.19■□□□□ 0.82
SKI-201ENST00000378536 RGS21Q2M5E4 152 aa20.19■□□□□ 0.82
SKI-201ENST00000378536 LARP4Q71RC2 724 aaKnown RBP eCLIP20.19■□□□□ 0.822e-7■■■■□ 24.1
SKI-201ENST00000378536 BTNL2Q9UIR0 455 aa20.19■□□□□ 0.82
SKI-201ENST00000378536 ANHXE9PGG2 379 aa20.19■□□□□ 0.82
SKI-201ENST00000378536 RBMS1P29558 406 aaKnown RBP20.19■□□□□ 0.82
SKI-201ENST00000378536 PDSS2Q86YH6 399 aa20.19■□□□□ 0.82
SKI-201ENST00000378536 MCATQ8IVS2 390 aaKnown RBP20.19■□□□□ 0.82
SKI-201ENST00000378536 INPP5KQ9BT40 448 aa20.19■□□□□ 0.82
SKI-201ENST00000378536 E2F3O00716 465 aa20.18■□□□□ 0.82
SKI-201ENST00000378536 AQP9O43315 295 aa20.18■□□□□ 0.82
SKI-201ENST00000378536 BLMHQ13867 455 aa20.18■□□□□ 0.82
SKI-201ENST00000378536 PUM1Q14671 1186 aaKnown RBP eCLIP20.18■□□□□ 0.821e-6■■□□□ 12.7
SKI-201ENST00000378536 LIMS2Q7Z4I7 341 aa20.18■□□□□ 0.82
SKI-201ENST00000378536 ACOT4Q8N9L9 421 aa20.18■□□□□ 0.82
SKI-201ENST00000378536 SLC30A3Q99726 388 aa20.18■□□□□ 0.82
SKI-201ENST00000378536 ACTRT3Q9BYD9 372 aa20.18■□□□□ 0.82
SKI-201ENST00000378536 KAT8Q9H7Z6 458 aaKnown RBP20.18■□□□□ 0.82
SKI-201ENST00000378536 TNFRSF10DQ9UBN6 386 aa20.18■□□□□ 0.82
SKI-201ENST00000378536 INTS6Q9UL03 887 aaKnown RBP20.18■□□□□ 0.82
SKI-201ENST00000378536 FAAHO00519 579 aa20.18■□□□□ 0.82
SKI-201ENST00000378536 RPLP0P05388 317 aaKnown RBP20.18■□□□□ 0.82
SKI-201ENST00000378536 SERTAD2Q14140 314 aa20.18■□□□□ 0.82
SKI-201ENST00000378536 FAM180BQ6P0A1 224 aa20.18■□□□□ 0.82
SKI-201ENST00000378536 LDAHQ9H6V9 325 aa20.18■□□□□ 0.82
SKI-201ENST00000378536 RNASET2O00584 256 aaKnown RBP20.18■□□□□ 0.82
SKI-201ENST00000378536 GNALP38405 381 aa20.18■□□□□ 0.82
SKI-201ENST00000378536 PRDX1Q06830 199 aaKnown RBP20.18■□□□□ 0.82
SKI-201ENST00000378536 KLHL17Q6TDP4 642 aa20.18■□□□□ 0.82
SKI-201ENST00000378536 GALNT10Q86SR1 603 aa20.18■□□□□ 0.82
SKI-201ENST00000378536 CIDECQ96AQ7 238 aaPredicted RBP20.18■□□□□ 0.82
SKI-201ENST00000378536 BIRC8Q96P09 236 aa20.18■□□□□ 0.82
SKI-201ENST00000378536 WDR12Q9GZL7 423 aaKnown RBP20.18■□□□□ 0.82
SKI-201ENST00000378536 MYO18AQ92614 2054 aaKnown RBP20.18■□□□□ 0.82
SKI-201ENST00000378536 CLCN2P51788 898 aa20.18■□□□□ 0.82
SKI-201ENST00000378536 ZNF423Q2M1K9 1284 aa20.18■□□□□ 0.82
SKI-201ENST00000378536 FIGNL1Q6PIW4 674 aa20.18■□□□□ 0.82
SKI-201ENST00000378536 FAM131AQ6UXB0 335 aa20.18■□□□□ 0.82
SKI-201ENST00000378536 ENDOVQ8N8Q3 282 aaKnown RBP20.18■□□□□ 0.82
SKI-201ENST00000378536 SLC22A8Q8TCC7 542 aa20.18■□□□□ 0.82
SKI-201ENST00000378536 EZH1Q92800 747 aaPredicted RBP20.18■□□□□ 0.82
SKI-201ENST00000378536 MYEOVQ96EZ4 313 aa20.18■□□□□ 0.82
SKI-201ENST00000378536 FAM129BQ96TA1 746 aa20.18■□□□□ 0.82
SKI-201ENST00000378536 SORBS1Q9BX66 1292 aaKnown RBP20.18■□□□□ 0.82
SKI-201ENST00000378536 MAGIXQ9H6Y5 334 aa20.18■□□□□ 0.82
SKI-201ENST00000378536 MYNNQ9NPC7 610 aa20.18■□□□□ 0.82
SKI-201ENST00000378536 GRHPRQ9UBQ7 328 aa20.18■□□□□ 0.82
SKI-201ENST00000378536 TNS1Q9HBL0 1735 aaKnown RBP20.18■□□□□ 0.82
SKI-201ENST00000378536 IQCJ-SCHIP1C9J366 451 aaPredicted RBP20.18■□□□□ 0.82
SKI-201ENST00000378536 PRAMEF2O60811 474 aa20.18■□□□□ 0.82
SKI-201ENST00000378536 LDOC1O95751 146 aaPredicted RBP20.18■□□□□ 0.82
SKI-201ENST00000378536 TACSTD2P09758 323 aa20.18■□□□□ 0.82
SKI-201ENST00000378536 SDC2P34741 201 aa20.18■□□□□ 0.82
SKI-201ENST00000378536 PPP3R1P63098 170 aa20.18■□□□□ 0.82
SKI-201ENST00000378536 BCL7AQ4VC05 210 aa20.18■□□□□ 0.82
SKI-201ENST00000378536 GOLM1Q8NBJ4 401 aa20.18■□□□□ 0.82
SKI-201ENST00000378536 TLX2O43763 284 aaPredicted RBP20.17■□□□□ 0.82
SKI-201ENST00000378536 CR2P20023 1033 aa20.17■□□□□ 0.82
SKI-201ENST00000378536 GPX3P22352 226 aa20.17■□□□□ 0.82
SKI-201ENST00000378536 GBX2P52951 348 aaPredicted RBP20.17■□□□□ 0.82
SKI-201ENST00000378536 CRTC2Q53ET0 693 aaPredicted RBP20.17■□□□□ 0.82
SKI-201ENST00000378536 HENMT1Q5T8I9 393 aaKnown RBP20.17■□□□□ 0.82
SKI-201ENST00000378536 HMGN2P46Q86SG4 172 aa20.17■□□□□ 0.82
SKI-201ENST00000378536 TMEM19Q96HH6 336 aa20.17■□□□□ 0.82
SKI-201ENST00000378536 MCCC2Q9HCC0 563 aa20.17■□□□□ 0.82
SKI-201ENST00000378536 CUEDC1Q9NWM3 386 aaPredicted RBP20.17■□□□□ 0.82
SKI-201ENST00000378536 MRPL39Q9NYK5 338 aaKnown RBP20.17■□□□□ 0.82
SKI-201ENST00000378536 ASNA1O43681 348 aa20.17■□□□□ 0.82
SKI-201ENST00000378536 CSNK1EP49674 416 aaKnown RBP20.17■□□□□ 0.82
SKI-201ENST00000378536 TPMTP51580 245 aa20.17■□□□□ 0.82
SKI-201ENST00000378536 TLR1Q15399 786 aa20.17■□□□□ 0.82
SKI-201ENST00000378536 NAT6Q93015 286 aa20.17■□□□□ 0.82
SKI-201ENST00000378536 LPAR4Q99677 370 aa20.17■□□□□ 0.82
SKI-201ENST00000378536 KCNK13Q9HB14 408 aa20.17■□□□□ 0.82
SKI-201ENST00000378536 STARD5Q9NSY2 213 aa20.17■□□□□ 0.82
SKI-201ENST00000378536 RDH16O75452 317 aa20.17■□□□□ 0.82
SKI-201ENST00000378536 NR4A1P22736 598 aa20.17■□□□□ 0.82
SKI-201ENST00000378536 LHCGRP22888 699 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms