RNA–Protein interactions for RNA: ENST00000377269.3

UBA1-202, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

TSL 2 BASIC

Gene UBA1, Length 2,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-202ENST00000377269 GABARAPL3Q9BY60 117 aa13.96□□□□□ -0.17
UBA1-202ENST00000377269 POLMQ9NP87 494 aaPredicted RBP13.96□□□□□ -0.17
UBA1-202ENST00000377269 TIGARQ9NQ88 270 aa13.96□□□□□ -0.17
UBA1-202ENST00000377269 VPS4AQ9UN37 437 aa13.96□□□□□ -0.17
UBA1-202ENST00000377269 CYP8B1Q9UNU6 501 aa13.96□□□□□ -0.17
UBA1-202ENST00000377269 POLR3HQ9Y535 204 aaPredicted RBP13.96□□□□□ -0.17
UBA1-202ENST00000377269 ZDBF2Q9HCK1 2354 aa13.96□□□□□ -0.17
UBA1-202ENST00000377269 IGLV3-16A0A075B6K0 115 aa13.96□□□□□ -0.18
UBA1-202ENST00000377269 MYO1GB0I1T2 1018 aa13.96□□□□□ -0.18
UBA1-202ENST00000377269 E5RI56 91 aa13.96□□□□□ -0.18
UBA1-202ENST00000377269 SGTAO43765 313 aa13.96□□□□□ -0.18
UBA1-202ENST00000377269 ERN1O75460 977 aaKnown RBP13.96□□□□□ -0.18
UBA1-202ENST00000377269 IFI30P13284 250 aa13.96□□□□□ -0.18
UBA1-202ENST00000377269 CPN2P22792 545 aa13.96□□□□□ -0.18
UBA1-202ENST00000377269 NSG1P42857 185 aa13.96□□□□□ -0.18
UBA1-202ENST00000377269 CLCN7P51798 805 aa13.96□□□□□ -0.18
UBA1-202ENST00000377269 MAPK12P53778 367 aa13.96□□□□□ -0.18
UBA1-202ENST00000377269 CRISP3P54108 245 aa13.96□□□□□ -0.18
UBA1-202ENST00000377269 MTAPQ13126 283 aa13.96□□□□□ -0.18
UBA1-202ENST00000377269 TSNQ15631 228 aaKnown RBP13.96□□□□□ -0.18
UBA1-202ENST00000377269 BTBD16Q32M84 506 aa13.96□□□□□ -0.18
UBA1-202ENST00000377269 SLC35F1Q5T1Q4 408 aa13.96□□□□□ -0.18
UBA1-202ENST00000377269 USP30Q70CQ3 517 aa13.96□□□□□ -0.18
UBA1-202ENST00000377269 ATCAYQ86WG3 371 aa13.96□□□□□ -0.18
UBA1-202ENST00000377269 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.96□□□□□ -0.18
UBA1-202ENST00000377269 PHACTR4Q8IZ21 702 aa13.96□□□□□ -0.18
UBA1-202ENST00000377269 ATG16L2Q8NAA4 619 aa13.96□□□□□ -0.18
UBA1-202ENST00000377269 TSTD1Q8NFU3 115 aa13.96□□□□□ -0.18
UBA1-202ENST00000377269 CD200R1Q8TD46 325 aa13.96□□□□□ -0.18
UBA1-202ENST00000377269 GPR151Q8TDV0 419 aa13.96□□□□□ -0.18
UBA1-202ENST00000377269 ZBTB18Q99592 522 aa13.96□□□□□ -0.18
UBA1-202ENST00000377269 PRRG3Q9BZD7 231 aa13.96□□□□□ -0.18
UBA1-202ENST00000377269 TAS2R13Q9NYV9 303 aa13.96□□□□□ -0.18
UBA1-202ENST00000377269 SCML1Q9UN30 329 aa13.96□□□□□ -0.18
UBA1-202ENST00000377269 SAMD4AQ9UPU9 718 aaKnown RBP13.96□□□□□ -0.18
UBA1-202ENST00000377269 NCKAP1Q9Y2A7 1128 aa13.96□□□□□ -0.18
UBA1-202ENST00000377269 OR1A2Q9Y585 309 aa13.96□□□□□ -0.18
UBA1-202ENST00000377269 PCM1Q15154 2024 aa13.95□□□□□ -0.18
UBA1-202ENST00000377269 PI15O43692 258 aa13.95□□□□□ -0.18
UBA1-202ENST00000377269 CTSCP53634 463 aa13.95□□□□□ -0.18
UBA1-202ENST00000377269 ERVPABLB-1P60509 514 aa13.95□□□□□ -0.18
UBA1-202ENST00000377269 RPS21P63220 83 aaKnown RBP13.95□□□□□ -0.18
UBA1-202ENST00000377269 AP5B1Q2VPB7 878 aa13.95□□□□□ -0.18
UBA1-202ENST00000377269 RFTN2Q52LD8 501 aaPredicted RBP13.95□□□□□ -0.18
UBA1-202ENST00000377269 TRIM48Q8IWZ4 208 aa13.95□□□□□ -0.18
UBA1-202ENST00000377269 RASGEF1AQ8N9B8 481 aa13.95□□□□□ -0.18
UBA1-202ENST00000377269 LHFPL5Q8TAF8 219 aa13.95□□□□□ -0.18
UBA1-202ENST00000377269 UBASH3BQ8TF42 649 aa13.95□□□□□ -0.18
UBA1-202ENST00000377269 ULK4Q96C45 1275 aa13.95□□□□□ -0.18
UBA1-202ENST00000377269 COQ8BQ96D53 544 aa13.95□□□□□ -0.18
UBA1-202ENST00000377269 CCDC120Q96HB5 630 aa13.95□□□□□ -0.18
UBA1-202ENST00000377269 C1QTNF2Q9BXJ5 285 aa13.95□□□□□ -0.18
UBA1-202ENST00000377269 HDHD5Q9BXW7 423 aa13.95□□□□□ -0.18
UBA1-202ENST00000377269 SLC17A9Q9BYT1 436 aa13.95□□□□□ -0.18
UBA1-202ENST00000377269 C11orf54Q9H0W9 315 aaPredicted RBP13.95□□□□□ -0.18
UBA1-202ENST00000377269 RAD18Q9NS91 495 aa13.95□□□□□ -0.18
UBA1-202ENST00000377269 KIF17Q9P2E2 1029 aa13.95□□□□□ -0.18
UBA1-202ENST00000377269 FAM8A1Q9UBU6 413 aa13.95□□□□□ -0.18
UBA1-202ENST00000377269 FZD4Q9ULV1 537 aa13.95□□□□□ -0.18
UBA1-202ENST00000377269 CA5BQ9Y2D0 317 aa13.95□□□□□ -0.18
UBA1-202ENST00000377269 KNL1Q8NG31 2342 aa13.95□□□□□ -0.18
UBA1-202ENST00000377269 EFCAB10A6NFE3 127 aa13.95□□□□□ -0.18
UBA1-202ENST00000377269 VPS26AO75436 327 aa13.95□□□□□ -0.18
UBA1-202ENST00000377269 STSP08842 583 aa13.95□□□□□ -0.18
UBA1-202ENST00000377269 ATP1B2P14415 290 aaPredicted RBP13.95□□□□□ -0.18
UBA1-202ENST00000377269 RPS3P23396 243 aaKnown RBP eCLIP13.95□□□□□ -0.181e-6■■■■□ 25.4
UBA1-202ENST00000377269 HTR6P50406 440 aa13.95□□□□□ -0.18
UBA1-202ENST00000377269 DPTQ07507 201 aa13.95□□□□□ -0.18
UBA1-202ENST00000377269 IKZF1Q13422 519 aa13.95□□□□□ -0.18
UBA1-202ENST00000377269 IRF4Q15306 451 aa13.95□□□□□ -0.18
UBA1-202ENST00000377269 NR6A1Q15406 480 aa13.95□□□□□ -0.18
UBA1-202ENST00000377269 TAB1Q15750 504 aa13.95□□□□□ -0.18
UBA1-202ENST00000377269 FAM174BQ3ZCQ3 159 aa13.95□□□□□ -0.18
UBA1-202ENST00000377269 C10orf62Q5T681 223 aaPredicted RBP13.95□□□□□ -0.18
UBA1-202ENST00000377269 LYPLAL1Q5VWZ2 237 aa13.95□□□□□ -0.18
UBA1-202ENST00000377269 ZNF367Q7RTV3 350 aa13.95□□□□□ -0.18
UBA1-202ENST00000377269 KRT73Q86Y46 540 aa13.95□□□□□ -0.18
UBA1-202ENST00000377269 C10orf111Q8N326 155 aa13.95□□□□□ -0.18
UBA1-202ENST00000377269 KCNJ9Q92806 393 aa13.95□□□□□ -0.18
UBA1-202ENST00000377269 SH3KBP1Q96B97 665 aa13.95□□□□□ -0.18
UBA1-202ENST00000377269 FAM120BQ96EK7 910 aaKnown RBP13.95□□□□□ -0.18
UBA1-202ENST00000377269 NELL2Q99435 816 aa13.95□□□□□ -0.18
UBA1-202ENST00000377269 CPPED1Q9BRF8 314 aaPredicted RBP13.95□□□□□ -0.18
UBA1-202ENST00000377269 SLC7A5P2Q9GIP4 190 aa13.95□□□□□ -0.18
UBA1-202ENST00000377269 BTBD1Q9H0C5 482 aa13.95□□□□□ -0.18
UBA1-202ENST00000377269 KCNN2Q9H2S1 579 aa13.95□□□□□ -0.18
UBA1-202ENST00000377269 SIRT5Q9NXA8 310 aa13.95□□□□□ -0.18
UBA1-202ENST00000377269 SIT1Q9Y3P8 196 aa13.95□□□□□ -0.18
UBA1-202ENST00000377269 PCYT1BQ9Y5K3 369 aaPredicted RBP13.95□□□□□ -0.18
UBA1-202ENST00000377269 ZNF106Q9H2Y7 1883 aaKnown RBP13.94□□□□□ -0.18
UBA1-202ENST00000377269 CDC7O00311 574 aa13.94□□□□□ -0.18
UBA1-202ENST00000377269 E2F3O00716 465 aa13.94□□□□□ -0.18
UBA1-202ENST00000377269 CCNDBP1O95273 360 aa13.94□□□□□ -0.18
UBA1-202ENST00000377269 SEMG1P04279 462 aa13.94□□□□□ -0.18
UBA1-202ENST00000377269 IL6P05231 212 aa13.94□□□□□ -0.18
UBA1-202ENST00000377269 ALAS2P22557 587 aa13.94□□□□□ -0.18
UBA1-202ENST00000377269 TEKQ02763 1124 aa13.94□□□□□ -0.18
UBA1-202ENST00000377269 TMEM115Q12893 351 aaPredicted RBP13.94□□□□□ -0.18
UBA1-202ENST00000377269 SGCGQ13326 291 aa13.94□□□□□ -0.18
UBA1-202ENST00000377269 GTDC1Q4AE62 458 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms