RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 PLD2O14939 933 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 SLC16A5O15375 505 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 AP1G1O43747 822 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 PRMT3O60678 531 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 HPGDSO60760 199 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 SLC19A2O60779 497 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 NFATC1O95644 943 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 GSRP00390 522 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 ATF6P18850 670 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 FAUP35544 74 aaKnown RBP6.25□□□□□ -1.41
SMC1A-202ENST00000375340 GRASPQ7Z6J2 395 aaPredicted RBP6.25□□□□□ -1.41
SMC1A-202ENST00000375340 TSPYL5Q86VY4 417 aaPredicted RBP6.25□□□□□ -1.41
SMC1A-202ENST00000375340 TRAM1L1Q8N609 369 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 CARD8Q9Y2G2 431 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 MED31Q9Y3C7 131 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 NUAK1O60285 661 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 CDC123O75794 336 aaPredicted RBP6.25□□□□□ -1.41
SMC1A-202ENST00000375340 AHCYP23526 432 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 GGT2P36268 569 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 NAA10P41227 235 aaPredicted RBP6.25□□□□□ -1.41
SMC1A-202ENST00000375340 PPP5CP53041 499 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 CBLBQ13191 982 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 HYAL4Q2M3T9 481 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 LRIT3Q3SXY7 679 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 NXPE4Q6UWF7 544 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 ABHD13Q7L211 337 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 LSM14AQ8ND56 463 aaKnown RBP6.25□□□□□ -1.41
SMC1A-202ENST00000375340 OSTF1Q92882 214 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 CARS2Q9HA77 564 aaKnown RBP6.25□□□□□ -1.41
SMC1A-202ENST00000375340 TCF7L1Q9HCS4 588 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 ZFR2Q9UPR6 939 aaKnown RBP6.25□□□□□ -1.41
SMC1A-202ENST00000375340 DRGXA6NNA5 263 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 PDCD5O14737 125 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 SOCS5O75159 536 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 CDK1P06493 297 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 PCGF2P35227 344 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 CLCN7P51798 805 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 ARF5P84085 180 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 PUDPQ08623 228 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 C4orf46Q504U0 113 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 LY6G5CQ5SRR4 150 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 RFLNAQ6ZTI6 216 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 COMMD6Q7Z4G1 85 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 LRRTM4Q86VH4 590 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.25□□□□□ -1.41
SMC1A-202ENST00000375340 ALDH16A1Q8IZ83 802 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 IGSF21Q96ID5 467 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 B3GNT4Q9C0J1 378 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 IFT46Q9NQC8 304 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 AKAP7Q9P0M2 348 aaPredicted RBP6.25□□□□□ -1.41
SMC1A-202ENST00000375340 PLXNB2O15031 1838 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 A0A1W2PQL4 384 aaPredicted RBP6.25□□□□□ -1.41
SMC1A-202ENST00000375340 TOXO94900 526 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 GSTT2P0CG29 244 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 GSTT2BP0CG30 244 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 GNALP38405 381 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 GBX2P52951 348 aaPredicted RBP6.25□□□□□ -1.41
SMC1A-202ENST00000375340 AP3S2P59780 193 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 SCGB2B2Q4G0G5 96 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 ZNF551Q7Z340 670 aaPredicted RBP6.25□□□□□ -1.41
SMC1A-202ENST00000375340 HSD11B1LQ7Z5J1 315 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 BCDIN3DQ7Z5W3 292 aaKnown RBP6.25□□□□□ -1.41
SMC1A-202ENST00000375340 OR56A1Q8NGH5 318 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 SPATA9Q9BWV2 254 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 FARSAQ9Y285 508 aaKnown RBP6.25□□□□□ -1.41
SMC1A-202ENST00000375340 PCDH17O14917 1159 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 C1GALT1C1LP0DN25 315 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 TGFBR2P37173 567 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 RBBP4Q09028 425 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 BTN2A1Q7KYR7 527 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 OR13F1Q8NGS4 319 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 TFGQ92734 400 aaPredicted RBP6.25□□□□□ -1.41
SMC1A-202ENST00000375340 GTF2H4Q92759 462 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 LHX3Q9UBR4 397 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 TRBV4-1A0A0J9YWV2 114 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 EDDM13A0A1B0GTR0 161 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 A0A1B0GVC2 190 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 A6NIN4 97 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 OAZ2O95190 189 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 CSNK2A2P19784 350 aaPredicted RBP6.25□□□□□ -1.41
SMC1A-202ENST00000375340 ZNF783Q6ZMS7 281 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 TAF8Q7Z7C8 310 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 CELF2-AS1Q8N7Q2 184 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 ZNF548Q8NEK5 533 aaPredicted RBP6.25□□□□□ -1.41
SMC1A-202ENST00000375340 TMEM19Q96HH6 336 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 CASD1Q96PB1 797 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 COMMD4Q9H0A8 199 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 PLAC1Q9HBJ0 212 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 NEUROD4Q9HD90 331 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 BAIAP2Q9UQB8 552 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 STON1Q9Y6Q2 735 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 PTTG1O95997 202 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 DEFA5Q01523 94 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 PIP5KL1Q5T9C9 394 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 ENPP7Q6UWV6 458 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 CEACAM19Q7Z692 300 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 S100A13Q99584 98 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 TM9SF2Q99805 663 aa6.25□□□□□ -1.41
SMC1A-202ENST00000375340 DPCDQ9BVM2 203 aaPredicted RBP6.25□□□□□ -1.41
SMC1A-202ENST00000375340 CSNK1G1Q9HCP0 422 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms