RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 ESR1P03372 595 aa11.6□□□□□ -0.55
C9orf3-203ENST00000375315 SLC2A4P14672 509 aa11.6□□□□□ -0.55
C9orf3-203ENST00000375315 PXNP49023 591 aaPredicted RBP11.6□□□□□ -0.55
C9orf3-203ENST00000375315 AGTR2P50052 363 aa11.6□□□□□ -0.55
C9orf3-203ENST00000375315 BTG1P62324 171 aa11.6□□□□□ -0.55
C9orf3-203ENST00000375315 MADCAM1Q13477 382 aa11.6□□□□□ -0.55
C9orf3-203ENST00000375315 ZNF169Q14929 603 aaPredicted RBP11.6□□□□□ -0.55
C9orf3-203ENST00000375315 TSNQ15631 228 aaKnown RBP11.6□□□□□ -0.55
C9orf3-203ENST00000375315 SNAPC1Q16533 368 aa11.6□□□□□ -0.55
C9orf3-203ENST00000375315 ARHGAP15Q53QZ3 475 aa11.6□□□□□ -0.55
C9orf3-203ENST00000375315 SPANXN4Q5MJ08 99 aa11.6□□□□□ -0.55
C9orf3-203ENST00000375315 ZNF600Q6ZNG1 722 aa11.6□□□□□ -0.55
C9orf3-203ENST00000375315 RRM2BQ7LG56 351 aa11.6□□□□□ -0.55
C9orf3-203ENST00000375315 OR4F6Q8NGB9 312 aa11.6□□□□□ -0.55
C9orf3-203ENST00000375315 P2RY13Q9BPV8 354 aa11.6□□□□□ -0.55
C9orf3-203ENST00000375315 ZFP64Q9NPA5 681 aa11.6□□□□□ -0.55
C9orf3-203ENST00000375315 HPF1Q9NWY4 346 aa11.6□□□□□ -0.55
C9orf3-203ENST00000375315 KIF25Q9UIL4 384 aa11.6□□□□□ -0.55
C9orf3-203ENST00000375315 LOC102723532A0A0G2JNH3 316 aa11.59□□□□□ -0.55
C9orf3-203ENST00000375315 HNRNPCL2B2RXH8 293 aa11.59□□□□□ -0.55
C9orf3-203ENST00000375315 AP2A2O94973 939 aa11.59□□□□□ -0.55
C9orf3-203ENST00000375315 OR5F1O95221 314 aa11.59□□□□□ -0.55
C9orf3-203ENST00000375315 ITGB7P26010 798 aa11.59□□□□□ -0.55
C9orf3-203ENST00000375315 STOMP27105 288 aa11.59□□□□□ -0.55
C9orf3-203ENST00000375315 APEX1P27695 318 aaKnown RBP11.59□□□□□ -0.55
C9orf3-203ENST00000375315 SDC2P34741 201 aa11.59□□□□□ -0.55
C9orf3-203ENST00000375315 HOXA1P49639 335 aaPredicted RBP11.59□□□□□ -0.55
C9orf3-203ENST00000375315 SUOXP51687 545 aa11.59□□□□□ -0.55
C9orf3-203ENST00000375315 GRM7Q14831 915 aa11.59□□□□□ -0.55
C9orf3-203ENST00000375315 LRFN4Q6PJG9 635 aa11.59□□□□□ -0.55
C9orf3-203ENST00000375315 CHMP1BQ7LBR1 199 aa11.59□□□□□ -0.55
C9orf3-203ENST00000375315 FAM217AQ8IXS0 508 aa11.59□□□□□ -0.55
C9orf3-203ENST00000375315 DCBLD1Q8N8Z6 715 aa11.59□□□□□ -0.55
C9orf3-203ENST00000375315 CHTF18Q8WVB6 975 aa11.59□□□□□ -0.55
C9orf3-203ENST00000375315 LRRC3BQ96PB8 259 aa11.59□□□□□ -0.55
C9orf3-203ENST00000375315 RBP7Q96R05 134 aa11.59□□□□□ -0.55
C9orf3-203ENST00000375315 ZNF382Q96SR6 550 aa11.59□□□□□ -0.55
C9orf3-203ENST00000375315 EPYCQ99645 322 aa11.59□□□□□ -0.55
C9orf3-203ENST00000375315 CCM2Q9BSQ5 444 aa11.59□□□□□ -0.55
C9orf3-203ENST00000375315 SDHAF2Q9NX18 166 aa11.59□□□□□ -0.55
C9orf3-203ENST00000375315 ZNF226Q9NYT6 803 aa11.59□□□□□ -0.55
C9orf3-203ENST00000375315 MARCH4Q9P2E8 410 aaPredicted RBP11.59□□□□□ -0.55
C9orf3-203ENST00000375315 RAI2Q9Y5P3 530 aa11.59□□□□□ -0.55
C9orf3-203ENST00000375315 PATJQ8NI35 1801 aa11.59□□□□□ -0.55
C9orf3-203ENST00000375315 HYKKA2RU49 373 aa11.59□□□□□ -0.55
C9orf3-203ENST00000375315 YKT6O15498 198 aa11.59□□□□□ -0.55
C9orf3-203ENST00000375315 MOSPD3O75425 235 aa11.59□□□□□ -0.55
C9orf3-203ENST00000375315 HLA-EP13747 358 aa11.59□□□□□ -0.55
C9orf3-203ENST00000375315 HLA-FP30511 346 aa11.59□□□□□ -0.55
C9orf3-203ENST00000375315 GZMMP51124 257 aa11.59□□□□□ -0.55
C9orf3-203ENST00000375315 RPL38P63173 70 aaKnown RBP11.59□□□□□ -0.55
C9orf3-203ENST00000375315 MAD2L1Q13257 205 aaPredicted RBP11.59□□□□□ -0.55
C9orf3-203ENST00000375315 RFTN2Q52LD8 501 aaPredicted RBP11.59□□□□□ -0.55
C9orf3-203ENST00000375315 BHLHB9Q6PI77 547 aa11.59□□□□□ -0.55
C9orf3-203ENST00000375315 PLPP6Q8IY26 295 aa11.59□□□□□ -0.55
C9orf3-203ENST00000375315 OR6C4Q8NGE1 309 aa11.59□□□□□ -0.55
C9orf3-203ENST00000375315 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.59□□□□□ -0.55
C9orf3-203ENST00000375315 DERL2Q9GZP9 239 aa11.59□□□□□ -0.55
C9orf3-203ENST00000375315 LIPT1Q9Y234 373 aa11.59□□□□□ -0.55
C9orf3-203ENST00000375315 STON1Q9Y6Q2 735 aa11.59□□□□□ -0.55
C9orf3-203ENST00000375315 KDELR3O43731 214 aa11.58□□□□□ -0.56
C9orf3-203ENST00000375315 GREM1O60565 184 aa11.58□□□□□ -0.56
C9orf3-203ENST00000375315 PLOD3O60568 738 aa11.58□□□□□ -0.56
C9orf3-203ENST00000375315 OR56A5P0C7T3 313 aa11.58□□□□□ -0.56
C9orf3-203ENST00000375315 SOX3P41225 446 aa11.58□□□□□ -0.56
C9orf3-203ENST00000375315 CRYBB2P43320 205 aa11.58□□□□□ -0.56
C9orf3-203ENST00000375315 HAAOP46952 286 aa11.58□□□□□ -0.56
C9orf3-203ENST00000375315 MESP2Q0VG99 397 aa11.58□□□□□ -0.56
C9orf3-203ENST00000375315 PTGR1Q14914 329 aa11.58□□□□□ -0.56
C9orf3-203ENST00000375315 GPR68Q15743 365 aa11.58□□□□□ -0.56
C9orf3-203ENST00000375315 PLAG1Q6DJT9 500 aa11.58□□□□□ -0.56
C9orf3-203ENST00000375315 ASTLQ6HA08 431 aaPredicted RBP11.58□□□□□ -0.56
C9orf3-203ENST00000375315 TMEM145Q8NBT3 493 aa11.58□□□□□ -0.56
C9orf3-203ENST00000375315 C7orf57Q8NEG2 295 aa11.58□□□□□ -0.56
C9orf3-203ENST00000375315 PHOSPHO2Q8TCD6 241 aa11.58□□□□□ -0.56
C9orf3-203ENST00000375315 HBEGFQ99075 208 aa11.58□□□□□ -0.56
C9orf3-203ENST00000375315 DPYSL5Q9BPU6 564 aa11.58□□□□□ -0.56
C9orf3-203ENST00000375315 CD274Q9NZQ7 290 aa11.58□□□□□ -0.56
C9orf3-203ENST00000375315 PCDHGB3Q9Y5G1 929 aa11.58□□□□□ -0.56
C9orf3-203ENST00000375315 KCNMB2Q9Y691 235 aa11.58□□□□□ -0.56
C9orf3-203ENST00000375315 DNMT3AQ9Y6K1 912 aaPredicted RBP11.58□□□□□ -0.56
C9orf3-203ENST00000375315 DOCK4Q8N1I0 1966 aa11.58□□□□□ -0.56
C9orf3-203ENST00000375315 TRBV5-3A0A0A0MS03 114 aa11.58□□□□□ -0.56
C9orf3-203ENST00000375315 SH3D21A4FU49 640 aa11.58□□□□□ -0.56
C9orf3-203ENST00000375315 SULT1B1O43704 296 aa11.58□□□□□ -0.56
C9orf3-203ENST00000375315 SH3BP5O60239 455 aa11.58□□□□□ -0.56
C9orf3-203ENST00000375315 DHFRP00374 187 aa11.58□□□□□ -0.56
C9orf3-203ENST00000375315 TYRP14679 529 aa11.58□□□□□ -0.56
C9orf3-203ENST00000375315 HK1P19367 917 aa11.58□□□□□ -0.56
C9orf3-203ENST00000375315 CDKN1CP49918 316 aaPredicted RBP11.58□□□□□ -0.56
C9orf3-203ENST00000375315 HTR6P50406 440 aa11.58□□□□□ -0.56
C9orf3-203ENST00000375315 PPP3R1P63098 170 aa11.58□□□□□ -0.56
C9orf3-203ENST00000375315 ZNF655Q8N720 491 aaPredicted RBP11.58□□□□□ -0.56
C9orf3-203ENST00000375315 OR4K2Q8NGD2 314 aa11.58□□□□□ -0.56
C9orf3-203ENST00000375315 SP7Q8TDD2 431 aaPredicted RBP11.58□□□□□ -0.56
C9orf3-203ENST00000375315 UCN3Q969E3 161 aa11.58□□□□□ -0.56
C9orf3-203ENST00000375315 AHCYL2Q96HN2 611 aaKnown RBP11.58□□□□□ -0.56
C9orf3-203ENST00000375315 SH3BP4Q9P0V3 963 aa11.58□□□□□ -0.56
C9orf3-203ENST00000375315 CFAP20Q9Y6A4 193 aaKnown RBP11.58□□□□□ -0.56
C9orf3-203ENST00000375315 CDH10Q9Y6N8 788 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms