RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 ZNF300Q96RE9 604 aaPredicted RBP11.04□□□□□ -0.64
PTCH1-203ENST00000375274 GPN2Q9H9Y4 310 aaPredicted RBP11.04□□□□□ -0.64
PTCH1-203ENST00000375274 ZBTB20Q9HC78 741 aaPredicted RBP11.04□□□□□ -0.64
PTCH1-203ENST00000375274 CENPMQ9NSP4 180 aa11.04□□□□□ -0.64
PTCH1-203ENST00000375274 NUDT15Q9NV35 164 aa11.04□□□□□ -0.64
PTCH1-203ENST00000375274 COPS7AQ9UBW8 275 aa11.04□□□□□ -0.64
PTCH1-203ENST00000375274 MYH9P35579 1960 aaKnown RBP11.04□□□□□ -0.64
PTCH1-203ENST00000375274 A0A1W2PQL4 384 aaPredicted RBP11.04□□□□□ -0.64
PTCH1-203ENST00000375274 HTR3EA5X5Y0 456 aa11.04□□□□□ -0.64
PTCH1-203ENST00000375274 WRBO00258 174 aa11.04□□□□□ -0.64
PTCH1-203ENST00000375274 COQ9O75208 318 aa11.04□□□□□ -0.64
PTCH1-203ENST00000375274 GSRP00390 522 aa11.04□□□□□ -0.64
PTCH1-203ENST00000375274 FCER2P06734 321 aa11.04□□□□□ -0.64
PTCH1-203ENST00000375274 OSMP13725 252 aa11.04□□□□□ -0.64
PTCH1-203ENST00000375274 EPCAMP16422 314 aa11.04□□□□□ -0.64
PTCH1-203ENST00000375274 PSMA6P60900 246 aaKnown RBP11.04□□□□□ -0.64
PTCH1-203ENST00000375274 EIF5AP63241 154 aaKnown RBP11.04□□□□□ -0.64
PTCH1-203ENST00000375274 FAM214AQ32MH5 1076 aa11.04□□□□□ -0.64
PTCH1-203ENST00000375274 RAB41Q5JT25 222 aa11.04□□□□□ -0.64
PTCH1-203ENST00000375274 CDKL4Q5MAI5 379 aa11.04□□□□□ -0.64
PTCH1-203ENST00000375274 SLC25A25Q6KCM7 469 aa11.04□□□□□ -0.64
PTCH1-203ENST00000375274 METTL2BQ6P1Q9 378 aaKnown RBP11.04□□□□□ -0.64
PTCH1-203ENST00000375274 CEACAM19Q7Z692 300 aa11.04□□□□□ -0.64
PTCH1-203ENST00000375274 GALNT7Q86SF2 657 aa11.04□□□□□ -0.64
PTCH1-203ENST00000375274 SERPINA11Q86U17 422 aa11.04□□□□□ -0.64
PTCH1-203ENST00000375274 ELMOD2Q8IZ81 293 aa11.04□□□□□ -0.64
PTCH1-203ENST00000375274 ZNF548Q8NEK5 533 aaPredicted RBP11.04□□□□□ -0.64
PTCH1-203ENST00000375274 METTL21AQ8WXB1 218 aa11.04□□□□□ -0.64
PTCH1-203ENST00000375274 LRIG1Q96JA1 1093 aa11.04□□□□□ -0.64
PTCH1-203ENST00000375274 SLC38A3Q99624 504 aa11.04□□□□□ -0.64
PTCH1-203ENST00000375274 OR51E2Q9H255 320 aa11.04□□□□□ -0.64
PTCH1-203ENST00000375274 RGS17Q9UGC6 210 aaPredicted RBP11.04□□□□□ -0.64
PTCH1-203ENST00000375274 E7EQ34 232 aa11.03□□□□□ -0.64
PTCH1-203ENST00000375274 PRKYO43930 277 aa11.03□□□□□ -0.64
PTCH1-203ENST00000375274 ARSAP15289 507 aa11.03□□□□□ -0.64
PTCH1-203ENST00000375274 CXCR1P25024 350 aa11.03□□□□□ -0.64
PTCH1-203ENST00000375274 ZNF33BQ06732 778 aa11.03□□□□□ -0.64
PTCH1-203ENST00000375274 SNTB2Q13425 540 aaKnown RBP11.03□□□□□ -0.64
PTCH1-203ENST00000375274 ARFRP1Q13795 201 aa11.03□□□□□ -0.64
PTCH1-203ENST00000375274 MICAQ29983 383 aa11.03□□□□□ -0.64
PTCH1-203ENST00000375274 SCGB2B2Q4G0G5 96 aa11.03□□□□□ -0.64
PTCH1-203ENST00000375274 IER5LQ5T953 404 aa11.03□□□□□ -0.64
PTCH1-203ENST00000375274 CPZQ66K79 652 aa11.03□□□□□ -0.64
PTCH1-203ENST00000375274 DESI1Q6ICB0 168 aa11.03□□□□□ -0.64
PTCH1-203ENST00000375274 KLBQ86Z14 1044 aa11.03□□□□□ -0.64
PTCH1-203ENST00000375274 CELF5Q8N6W0 485 aaKnown RBP11.03□□□□□ -0.64
PTCH1-203ENST00000375274 SUN3Q8TAQ9 357 aa11.03□□□□□ -0.64
PTCH1-203ENST00000375274 ZNF689Q96CS4 500 aaPredicted RBP11.03□□□□□ -0.64
PTCH1-203ENST00000375274 COQ8BQ96D53 544 aa11.03□□□□□ -0.64
PTCH1-203ENST00000375274 P2RY13Q9BPV8 354 aa11.03□□□□□ -0.64
PTCH1-203ENST00000375274 TBL1XR1Q9BZK7 514 aa11.03□□□□□ -0.64
PTCH1-203ENST00000375274 B3GNT3Q9Y2A9 372 aa11.03□□□□□ -0.64
PTCH1-203ENST00000375274 BLOC1S5-TXNDC5H3BN57 136 aa11.03□□□□□ -0.64
PTCH1-203ENST00000375274 SOCS7O14512 581 aa11.03□□□□□ -0.64
PTCH1-203ENST00000375274 ASGR2P07307 311 aa11.03□□□□□ -0.64
PTCH1-203ENST00000375274 FHP07954 510 aa11.03□□□□□ -0.64
PTCH1-203ENST00000375274 IGFBP4P22692 258 aa11.03□□□□□ -0.64
PTCH1-203ENST00000375274 VAMP1P23763 118 aa11.03□□□□□ -0.64
PTCH1-203ENST00000375274 ZNF140P52738 457 aaPredicted RBP11.03□□□□□ -0.64
PTCH1-203ENST00000375274 CRTC1Q6UUV9 634 aa11.03□□□□□ -0.64
PTCH1-203ENST00000375274 NXPE4Q6UWF7 544 aa11.03□□□□□ -0.64
PTCH1-203ENST00000375274 GPR149Q86SP6 731 aa11.03□□□□□ -0.64
PTCH1-203ENST00000375274 STX12Q86Y82 276 aa11.03□□□□□ -0.64
PTCH1-203ENST00000375274 SLC22A15Q8IZD6 547 aa11.03□□□□□ -0.64
PTCH1-203ENST00000375274 JAGN1Q8N5M9 183 aa11.03□□□□□ -0.64
PTCH1-203ENST00000375274 ZNF615Q8N8J6 731 aa11.03□□□□□ -0.64
PTCH1-203ENST00000375274 GDPD1Q8N9F7 314 aa11.03□□□□□ -0.64
PTCH1-203ENST00000375274 OR2L5Q8NG80 312 aa11.03□□□□□ -0.64
PTCH1-203ENST00000375274 OR4K14Q8NGD5 310 aa11.03□□□□□ -0.64
PTCH1-203ENST00000375274 FANK1Q8TC84 345 aa11.03□□□□□ -0.64
PTCH1-203ENST00000375274 THEM6Q8WUY1 208 aa11.03□□□□□ -0.64
PTCH1-203ENST00000375274 CAPNS2Q96L46 248 aa11.03□□□□□ -0.64
PTCH1-203ENST00000375274 ZNF717Q9BY31 904 aaPredicted RBP11.03□□□□□ -0.64
PTCH1-203ENST00000375274 XKR8Q9H6D3 395 aa11.03□□□□□ -0.64
PTCH1-203ENST00000375274 EXO5Q9H790 373 aa11.03□□□□□ -0.64
PTCH1-203ENST00000375274 KCNK12Q9HB15 430 aa11.03□□□□□ -0.64
PTCH1-203ENST00000375274 GJD2Q9UKL4 321 aa11.03□□□□□ -0.64
PTCH1-203ENST00000375274 ACSL5Q9ULC5 683 aa11.03□□□□□ -0.64
PTCH1-203ENST00000375274 USP3Q9Y6I4 520 aa11.03□□□□□ -0.64
PTCH1-203ENST00000375274 AHDC1Q5TGY3 1603 aaPredicted RBP11.03□□□□□ -0.64
PTCH1-203ENST00000375274 AGAP5A6NIR3 686 aa11.03□□□□□ -0.64
PTCH1-203ENST00000375274 TOXO94900 526 aa11.03□□□□□ -0.64
PTCH1-203ENST00000375274 ZNF865P0CJ78 1059 aaPredicted RBP11.03□□□□□ -0.64
PTCH1-203ENST00000375274 MAPK3P27361 379 aaPredicted RBP11.03□□□□□ -0.64
PTCH1-203ENST00000375274 ARHGDIBP52566 201 aa11.03□□□□□ -0.64
PTCH1-203ENST00000375274 NHSL2Q5HYW2 709 aa11.03□□□□□ -0.64
PTCH1-203ENST00000375274 MRPL10Q7Z7H8 261 aaKnown RBP11.03□□□□□ -0.64
PTCH1-203ENST00000375274 DTX3Q8N9I9 347 aa11.03□□□□□ -0.64
PTCH1-203ENST00000375274 KHSRPQ92945 711 aaKnown RBP eCLIP11.03□□□□□ -0.64
PTCH1-203ENST00000375274 EGLN2Q96KS0 407 aa11.03□□□□□ -0.64
PTCH1-203ENST00000375274 NTMT1Q9BV86 223 aa11.03□□□□□ -0.64
PTCH1-203ENST00000375274 RANBP3Q9H6Z4 567 aaPredicted RBP11.03□□□□□ -0.64
PTCH1-203ENST00000375274 CD8B2A6NJW9 211 aa11.03□□□□□ -0.64
PTCH1-203ENST00000375274 PCDH17O14917 1159 aa11.03□□□□□ -0.64
PTCH1-203ENST00000375274 LATS1O95835 1130 aa11.03□□□□□ -0.64
PTCH1-203ENST00000375274 HTR1AP08908 422 aa11.03□□□□□ -0.64
PTCH1-203ENST00000375274 CD8BP10966 210 aa11.03□□□□□ -0.64
PTCH1-203ENST00000375274 AFF1P51825 1210 aaKnown RBP11.03□□□□□ -0.64
PTCH1-203ENST00000375274 ID2Q02363 134 aa11.03□□□□□ -0.64
PTCH1-203ENST00000375274 SPCS2Q15005 226 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms