RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 PTX3P26022 381 aaPredicted RBP10.27□□□□□ -0.77
CXCL12-203ENST00000374429 SNRPNP63162 240 aaKnown RBP10.27□□□□□ -0.77
CXCL12-203ENST00000374429 CDK5R2Q13319 367 aa10.27□□□□□ -0.77
CXCL12-203ENST00000374429 TMEM196Q5HYL7 178 aa10.27□□□□□ -0.77
CXCL12-203ENST00000374429 ANXA8L1Q5VT79 327 aa10.27□□□□□ -0.77
CXCL12-203ENST00000374429 SYCE2Q6PIF2 218 aa10.27□□□□□ -0.77
CXCL12-203ENST00000374429 FAM92BQ6ZTR7 304 aa10.27□□□□□ -0.77
CXCL12-203ENST00000374429 PTCHD4Q6ZW05 846 aa10.27□□□□□ -0.77
CXCL12-203ENST00000374429 KLHDC8AQ8IYD2 350 aa10.27□□□□□ -0.77
CXCL12-203ENST00000374429 SPARTQ8N0X7 666 aa10.27□□□□□ -0.77
CXCL12-203ENST00000374429 WFIKKN2Q8TEU8 576 aa10.27□□□□□ -0.77
CXCL12-203ENST00000374429 OTUB2Q96DC9 234 aa10.27□□□□□ -0.77
CXCL12-203ENST00000374429 CAMK1GQ96NX5 476 aa10.27□□□□□ -0.77
CXCL12-203ENST00000374429 PAK1IP1Q9NWT1 392 aaPredicted RBP10.27□□□□□ -0.77
CXCL12-203ENST00000374429 HCN2Q9UL51 889 aa10.27□□□□□ -0.77
CXCL12-203ENST00000374429 EXO1Q9UQ84 846 aaKnown RBP10.27□□□□□ -0.77
CXCL12-203ENST00000374429 HEATR5BQ9P2D3 2071 aa10.27□□□□□ -0.77
CXCL12-203ENST00000374429 ARID1AO14497 2285 aa10.27□□□□□ -0.77
CXCL12-203ENST00000374429 HAT1O14929 419 aa10.27□□□□□ -0.77
CXCL12-203ENST00000374429 FGF19O95750 216 aa10.27□□□□□ -0.77
CXCL12-203ENST00000374429 CRYZL1O95825 349 aa10.27□□□□□ -0.77
CXCL12-203ENST00000374429 CTSEP14091 401 aa10.27□□□□□ -0.77
CXCL12-203ENST00000374429 COL9A1P20849 921 aa10.27□□□□□ -0.77
CXCL12-203ENST00000374429 CRISP3P54108 245 aa10.27□□□□□ -0.77
CXCL12-203ENST00000374429 PPP1CAP62136 330 aa10.27□□□□□ -0.77
CXCL12-203ENST00000374429 SP140Q13342 867 aa10.27□□□□□ -0.77
CXCL12-203ENST00000374429 SLC9A5Q14940 896 aa10.27□□□□□ -0.77
CXCL12-203ENST00000374429 SMU1Q2TAY7 513 aa10.27□□□□□ -0.77
CXCL12-203ENST00000374429 ZBED5Q49AG3 693 aa10.27□□□□□ -0.77
CXCL12-203ENST00000374429 PRRT3Q5FWE3 981 aa10.27□□□□□ -0.77
CXCL12-203ENST00000374429 COQ5Q5HYK3 327 aa10.27□□□□□ -0.77
CXCL12-203ENST00000374429 TPRG1LQ5T0D9 272 aa10.27□□□□□ -0.77
CXCL12-203ENST00000374429 BTLAQ7Z6A9 289 aa10.27□□□□□ -0.77
CXCL12-203ENST00000374429 ZNF605Q86T29 641 aa10.27□□□□□ -0.77
CXCL12-203ENST00000374429 IQCHQ86VS3 1027 aa10.27□□□□□ -0.77
CXCL12-203ENST00000374429 AMER2Q8N7J2 671 aa10.27□□□□□ -0.77
CXCL12-203ENST00000374429 ZFP41Q8N8Y5 198 aa10.27□□□□□ -0.77
CXCL12-203ENST00000374429 OR56A3Q8NH54 315 aa10.27□□□□□ -0.77
CXCL12-203ENST00000374429 NDNFQ8TB73 568 aa10.27□□□□□ -0.77
CXCL12-203ENST00000374429 TBX5Q99593 518 aa10.27□□□□□ -0.77
CXCL12-203ENST00000374429 COPS4Q9BT78 406 aa10.27□□□□□ -0.77
CXCL12-203ENST00000374429 IL1RAPQ9NPH3 570 aa10.27□□□□□ -0.77
CXCL12-203ENST00000374429 GIMAP4Q9NUV9 329 aa10.27□□□□□ -0.77
CXCL12-203ENST00000374429 GPATCH2Q9NW75 528 aa10.27□□□□□ -0.77
CXCL12-203ENST00000374429 FAM120CQ9NX05 1096 aaKnown RBP10.27□□□□□ -0.77
CXCL12-203ENST00000374429 TAF4O00268 1085 aa10.26□□□□□ -0.77
CXCL12-203ENST00000374429 LRRTM2O43300 516 aa10.26□□□□□ -0.77
CXCL12-203ENST00000374429 CELA2BP08218 269 aaPredicted RBP10.26□□□□□ -0.77
CXCL12-203ENST00000374429 LAMP2P13473 410 aa10.26□□□□□ -0.77
CXCL12-203ENST00000374429 DNAJA1P31689 397 aaKnown RBP10.26□□□□□ -0.77
CXCL12-203ENST00000374429 NPRL3Q12980 569 aa10.26□□□□□ -0.77
CXCL12-203ENST00000374429 HEPACAMQ14CZ8 416 aa10.26□□□□□ -0.77
CXCL12-203ENST00000374429 SPCS2Q15005 226 aa10.26□□□□□ -0.77
CXCL12-203ENST00000374429 SUZ12Q15022 739 aaKnown RBP10.26□□□□□ -0.77
CXCL12-203ENST00000374429 RFX4Q33E94 735 aa10.26□□□□□ -0.77
CXCL12-203ENST00000374429 IFI44LQ53G44 452 aa10.26□□□□□ -0.77
CXCL12-203ENST00000374429 AGBL4Q5VU57 503 aa10.26□□□□□ -0.77
CXCL12-203ENST00000374429 SLC34A3Q8N130 599 aa10.26□□□□□ -0.77
CXCL12-203ENST00000374429 OR5T3Q8NGG3 340 aa10.26□□□□□ -0.77
CXCL12-203ENST00000374429 OR9A2Q8NGT5 310 aa10.26□□□□□ -0.77
CXCL12-203ENST00000374429 PSMA8Q8TAA3 256 aa10.26□□□□□ -0.77
CXCL12-203ENST00000374429 SMPDL3AQ92484 453 aa10.26□□□□□ -0.77
CXCL12-203ENST00000374429 APOL4Q9BPW4 351 aa10.26□□□□□ -0.77
CXCL12-203ENST00000374429 CCDC3Q9BQI4 270 aa10.26□□□□□ -0.77
CXCL12-203ENST00000374429 GORASP2Q9H8Y8 452 aa10.26□□□□□ -0.77
CXCL12-203ENST00000374429 ABCB10Q9NRK6 738 aa10.26□□□□□ -0.77
CXCL12-203ENST00000374429 A8MUA0 341 aa10.26□□□□□ -0.77
CXCL12-203ENST00000374429 PRMT3O60678 531 aa10.26□□□□□ -0.77
CXCL12-203ENST00000374429 IFNW1P05000 195 aa10.26□□□□□ -0.77
CXCL12-203ENST00000374429 FURINP09958 794 aa10.26□□□□□ -0.77
CXCL12-203ENST00000374429 ENPP1P22413 925 aa10.26□□□□□ -0.77
CXCL12-203ENST00000374429 CRHBPP24387 322 aa10.26□□□□□ -0.77
CXCL12-203ENST00000374429 MC3RP41968 323 aa10.26□□□□□ -0.77
CXCL12-203ENST00000374429 EMX1Q04741 257 aaPredicted RBP10.26□□□□□ -0.77
CXCL12-203ENST00000374429 DNASE1L3Q13609 305 aa10.26□□□□□ -0.77
CXCL12-203ENST00000374429 MLF2Q15773 248 aaPredicted RBP10.26□□□□□ -0.77
CXCL12-203ENST00000374429 SLC35F1Q5T1Q4 408 aa10.26□□□□□ -0.77
CXCL12-203ENST00000374429 SIGIRRQ6IA17 410 aa10.26□□□□□ -0.77
CXCL12-203ENST00000374429 DCDC5Q6ZRR9 648 aa10.26□□□□□ -0.77
CXCL12-203ENST00000374429 SLC9B2Q86UD5 537 aa10.26□□□□□ -0.77
CXCL12-203ENST00000374429 SLC38A6Q8IZM9 456 aa10.26□□□□□ -0.77
CXCL12-203ENST00000374429 NATD1Q8N6N6 113 aa10.26□□□□□ -0.77
CXCL12-203ENST00000374429 ZNF557Q8N988 423 aaPredicted RBP10.26□□□□□ -0.77
CXCL12-203ENST00000374429 ZFP90Q8TF47 636 aa10.26□□□□□ -0.77
CXCL12-203ENST00000374429 CHTF18Q8WVB6 975 aa10.26□□□□□ -0.77
CXCL12-203ENST00000374429 GPR174Q9BXC1 333 aa10.26□□□□□ -0.77
CXCL12-203ENST00000374429 SPATA6Q9NWH7 488 aaPredicted RBP10.26□□□□□ -0.77
CXCL12-203ENST00000374429 NDOR1Q9UHB4 597 aa10.26□□□□□ -0.77
CXCL12-203ENST00000374429 POU2F3Q9UKI9 436 aa10.26□□□□□ -0.77
CXCL12-203ENST00000374429 ANGPT4Q9Y264 503 aa10.26□□□□□ -0.77
CXCL12-203ENST00000374429 KCNE3Q9Y6H6 103 aa10.26□□□□□ -0.77
CXCL12-203ENST00000374429 DNMT3AQ9Y6K1 912 aaPredicted RBP10.26□□□□□ -0.77
CXCL12-203ENST00000374429 RP1P56715 2156 aa10.26□□□□□ -0.77
CXCL12-203ENST00000374429 TRBV4-1A0A0J9YWV2 114 aa10.25□□□□□ -0.77
CXCL12-203ENST00000374429 KMOO15229 486 aa10.25□□□□□ -0.77
CXCL12-203ENST00000374429 PCDHGA12O60330 932 aa10.25□□□□□ -0.77
CXCL12-203ENST00000374429 NDUFS2O75306 463 aa10.25□□□□□ -0.77
CXCL12-203ENST00000374429 PRKACAP17612 351 aa10.25□□□□□ -0.77
CXCL12-203ENST00000374429 AZGP1P25311 298 aaKnown RBP10.25□□□□□ -0.77
CXCL12-203ENST00000374429 NUP107P57740 925 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms