RNA–Protein interactions for RNA: ENST00000372972.6

CSTF2-201, Transcript of cleavage stimulation factor subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF2, Length 1,958 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-201ENST00000372972 EXOC3L2Q2M3D2 409 aa12.68□□□□□ -0.38
CSTF2-201ENST00000372972 RPS26P11Q5JNZ5 115 aaPredicted RBP12.68□□□□□ -0.38
CSTF2-201ENST00000372972 GTF2IRD2BQ6EKJ0 949 aa12.68□□□□□ -0.38
CSTF2-201ENST00000372972 GTF2IRD2Q86UP8 949 aa12.68□□□□□ -0.38
CSTF2-201ENST00000372972 SLC44A2Q8IWA5 706 aaPredicted RBP12.68□□□□□ -0.38
CSTF2-201ENST00000372972 HMGB4Q8WW32 186 aa12.68□□□□□ -0.38
CSTF2-201ENST00000372972 CDX2Q99626 313 aaPredicted RBP12.68□□□□□ -0.38
CSTF2-201ENST00000372972 TMEM168Q9H0V1 697 aa12.68□□□□□ -0.38
CSTF2-201ENST00000372972 DUSP21Q9H596 190 aa12.68□□□□□ -0.38
CSTF2-201ENST00000372972 ACER3Q9NUN7 267 aa12.68□□□□□ -0.38
CSTF2-201ENST00000372972 ZNF451Q9Y4E5 1061 aa12.68□□□□□ -0.38
CSTF2-201ENST00000372972 PCDHGB1Q9Y5G3 927 aa12.68□□□□□ -0.38
CSTF2-201ENST00000372972 TRBV23OR9-2A0A075B6M9 112 aa12.67□□□□□ -0.38
CSTF2-201ENST00000372972 WASHC1A8K0Z3 465 aa12.67□□□□□ -0.38
CSTF2-201ENST00000372972 J3KTA2 159 aa12.67□□□□□ -0.38
CSTF2-201ENST00000372972 PGRMC2O15173 223 aa12.67□□□□□ -0.38
CSTF2-201ENST00000372972 GADD45GO95257 159 aa12.67□□□□□ -0.38
CSTF2-201ENST00000372972 ATE1O95260 518 aa12.67□□□□□ -0.38
CSTF2-201ENST00000372972 RASGRP1O95267 797 aa12.67□□□□□ -0.38
CSTF2-201ENST00000372972 ITIH1P19827 911 aa12.67□□□□□ -0.38
CSTF2-201ENST00000372972 CD247P20963 164 aa12.67□□□□□ -0.38
CSTF2-201ENST00000372972 AKT2P31751 481 aa12.67□□□□□ -0.38
CSTF2-201ENST00000372972 SLC19A1P41440 591 aa12.67□□□□□ -0.38
CSTF2-201ENST00000372972 PXNP49023 591 aaPredicted RBP12.67□□□□□ -0.38
CSTF2-201ENST00000372972 NCBP2P52298 156 aaKnown RBP eCLIP12.67□□□□□ -0.38
CSTF2-201ENST00000372972 SRP54P61011 504 aaKnown RBP12.67□□□□□ -0.38
CSTF2-201ENST00000372972 TGM3Q08188 693 aa12.67□□□□□ -0.38
CSTF2-201ENST00000372972 PROX2Q3B8N5 592 aa12.67□□□□□ -0.38
CSTF2-201ENST00000372972 TJAP1Q5JTD0 557 aa12.67□□□□□ -0.38
CSTF2-201ENST00000372972 Q7L0L9 218 aa12.67□□□□□ -0.38
CSTF2-201ENST00000372972 ZNF605Q86T29 641 aa12.67□□□□□ -0.38
CSTF2-201ENST00000372972 PAQR7Q86WK9 346 aa12.67□□□□□ -0.38
CSTF2-201ENST00000372972 CCDC71Q8IV32 467 aaPredicted RBP12.67□□□□□ -0.38
CSTF2-201ENST00000372972 LGI4Q8N135 537 aa12.67□□□□□ -0.38
CSTF2-201ENST00000372972 ZNF607Q96SK3 696 aa12.67□□□□□ -0.38
CSTF2-201ENST00000372972 SH3GL3Q99963 347 aa12.67□□□□□ -0.38
CSTF2-201ENST00000372972 CCDC90BQ9GZT6 254 aa12.67□□□□□ -0.38
CSTF2-201ENST00000372972 APOBEC3BQ9UH17 382 aaKnown RBP12.67□□□□□ -0.38
CSTF2-201ENST00000372972 POFUT2Q9Y2G5 429 aa12.67□□□□□ -0.38
CSTF2-201ENST00000372972 HS3ST3A1Q9Y663 406 aa12.67□□□□□ -0.38
CSTF2-201ENST00000372972 TRIM64BA6NI03 449 aa12.67□□□□□ -0.38
CSTF2-201ENST00000372972 BTN3A3O00478 584 aa12.67□□□□□ -0.38
CSTF2-201ENST00000372972 ZW10O43264 779 aa12.67□□□□□ -0.38
CSTF2-201ENST00000372972 ERAL1O75616 437 aaKnown RBP12.67□□□□□ -0.38
CSTF2-201ENST00000372972 RECKO95980 971 aa12.67□□□□□ -0.38
CSTF2-201ENST00000372972 OR12D1P0DN82 309 aa12.67□□□□□ -0.38
CSTF2-201ENST00000372972 F3P13726 295 aa12.67□□□□□ -0.38
CSTF2-201ENST00000372972 PCMT1P22061 227 aa12.67□□□□□ -0.38
CSTF2-201ENST00000372972 LIMS1P48059 325 aa12.67□□□□□ -0.38
CSTF2-201ENST00000372972 RAB8AP61006 207 aa12.67□□□□□ -0.38
CSTF2-201ENST00000372972 RPS15AP62244 130 aaKnown RBP12.67□□□□□ -0.38
CSTF2-201ENST00000372972 CSNK2BP67870 215 aa12.67□□□□□ -0.38
CSTF2-201ENST00000372972 SLC35A2P78381 396 aa12.67□□□□□ -0.38
CSTF2-201ENST00000372972 PUM1Q14671 1186 aaKnown RBP eCLIP12.67□□□□□ -0.38
CSTF2-201ENST00000372972 KIR2DS3Q14952 304 aa12.67□□□□□ -0.38
CSTF2-201ENST00000372972 MAPK11Q15759 364 aa12.67□□□□□ -0.38
CSTF2-201ENST00000372972 NPTX1Q15818 432 aa12.67□□□□□ -0.38
CSTF2-201ENST00000372972 PTCRAQ6ISU1 281 aaPredicted RBP12.67□□□□□ -0.38
CSTF2-201ENST00000372972 GPR153Q6NV75 609 aa12.67□□□□□ -0.38
CSTF2-201ENST00000372972 RASSF5Q8WWW0 418 aa12.67□□□□□ -0.38
CSTF2-201ENST00000372972 PROX1Q92786 737 aa12.67□□□□□ -0.38
CSTF2-201ENST00000372972 MUL1Q969V5 352 aa12.67□□□□□ -0.38
CSTF2-201ENST00000372972 SLC35G5Q96KT7 338 aa12.67□□□□□ -0.38
CSTF2-201ENST00000372972 NAA50Q9GZZ1 169 aaKnown RBP12.67□□□□□ -0.38
CSTF2-201ENST00000372972 SERHL2Q9H4I8 314 aa12.67□□□□□ -0.38
CSTF2-201ENST00000372972 SYNPO2LQ9H987 977 aa12.67□□□□□ -0.38
CSTF2-201ENST00000372972 ZNF556Q9HAH1 456 aa12.67□□□□□ -0.38
CSTF2-201ENST00000372972 SEMA3GQ9NS98 782 aa12.67□□□□□ -0.38
CSTF2-201ENST00000372972 ZCCHC3Q9NUD5 404 aaKnown RBP12.67□□□□□ -0.38
CSTF2-201ENST00000372972 RLIMQ9NVW2 624 aa12.67□□□□□ -0.38
CSTF2-201ENST00000372972 TRNAU1APQ9NX07 287 aaKnown RBP12.67□□□□□ -0.38
CSTF2-201ENST00000372972 AASSQ9UDR5 926 aa12.67□□□□□ -0.38
CSTF2-201ENST00000372972 FBXW2Q9UKT8 454 aa12.67□□□□□ -0.38
CSTF2-201ENST00000372972 HCN4Q9Y3Q4 1203 aa12.67□□□□□ -0.38
CSTF2-201ENST00000372972 PCDHGA6Q9Y5G7 932 aa12.67□□□□□ -0.38
CSTF2-201ENST00000372972 A6NCN8 305 aa12.66□□□□□ -0.38
CSTF2-201ENST00000372972 PCDH17O14917 1159 aa12.66□□□□□ -0.38
CSTF2-201ENST00000372972 PROM1O43490 865 aa12.66□□□□□ -0.38
CSTF2-201ENST00000372972 SLC28A2O43868 658 aa12.66□□□□□ -0.38
CSTF2-201ENST00000372972 PRKRAO75569 313 aaKnown RBP12.66□□□□□ -0.38
CSTF2-201ENST00000372972 AIFM1O95831 613 aa12.66□□□□□ -0.38
CSTF2-201ENST00000372972 CHRNB1P11230 501 aa12.66□□□□□ -0.38
CSTF2-201ENST00000372972 MAGEA8P43361 318 aa12.66□□□□□ -0.38
CSTF2-201ENST00000372972 ALG11Q2TAA5 492 aa12.66□□□□□ -0.38
CSTF2-201ENST00000372972 LEXMQ3ZCV2 418 aa12.66□□□□□ -0.38
CSTF2-201ENST00000372972 LAIR1Q6GTX8 287 aa12.66□□□□□ -0.38
CSTF2-201ENST00000372972 BHLHB9Q6PI77 547 aa12.66□□□□□ -0.38
CSTF2-201ENST00000372972 TMEM64Q6YI46 380 aa12.66□□□□□ -0.38
CSTF2-201ENST00000372972 SZRD1Q7Z422 152 aa12.66□□□□□ -0.38
CSTF2-201ENST00000372972 PHF10Q8WUB8 498 aaKnown RBP12.66□□□□□ -0.38
CSTF2-201ENST00000372972 APOBEC4Q8WW27 367 aaKnown RBP12.66□□□□□ -0.38
CSTF2-201ENST00000372972 XAGE5Q8WWM1 108 aa12.66□□□□□ -0.38
CSTF2-201ENST00000372972 UBE2FQ969M7 185 aa12.66□□□□□ -0.38
CSTF2-201ENST00000372972 PSD2Q9BQI7 771 aa12.66□□□□□ -0.38
CSTF2-201ENST00000372972 OR51I1Q9H343 314 aa12.66□□□□□ -0.38
CSTF2-201ENST00000372972 RASSF1Q9NS23 344 aa12.66□□□□□ -0.38
CSTF2-201ENST00000372972 ERVK-18Q9QC07 812 aa12.66□□□□□ -0.38
CSTF2-201ENST00000372972 P2RX2Q9UBL9 471 aa12.66□□□□□ -0.38
CSTF2-201ENST00000372972 TRPC4Q9UBN4 977 aa12.66□□□□□ -0.38
CSTF2-201ENST00000372972 CES1P1Q9UKY3 287 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms