RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 FZD3Q9NPG1 666 aa14.08□□□□□ -0.15
COL9A2-202ENST00000372748 MCUBQ9NWR8 336 aa14.08□□□□□ -0.15
COL9A2-202ENST00000372748 STMN3Q9NZ72 180 aa14.08□□□□□ -0.15
COL9A2-202ENST00000372748 OR2B3O76000 313 aa14.08□□□□□ -0.16
COL9A2-202ENST00000372748 ATP1B2P14415 290 aaPredicted RBP14.08□□□□□ -0.16
COL9A2-202ENST00000372748 MAP2K3P46734 347 aa14.08□□□□□ -0.16
COL9A2-202ENST00000372748 XKP51811 444 aa14.08□□□□□ -0.16
COL9A2-202ENST00000372748 AP1S2P56377 157 aa14.08□□□□□ -0.16
COL9A2-202ENST00000372748 RPS25P62851 125 aaKnown RBP14.08□□□□□ -0.16
COL9A2-202ENST00000372748 PCDH1Q08174 1060 aa14.08□□□□□ -0.16
COL9A2-202ENST00000372748 MLLT11Q13015 90 aaPredicted RBP14.08□□□□□ -0.16
COL9A2-202ENST00000372748 NCF4Q15080 339 aa14.08□□□□□ -0.16
COL9A2-202ENST00000372748 CRB2Q5IJ48 1285 aa14.08□□□□□ -0.16
COL9A2-202ENST00000372748 TPGS2Q68CL5 300 aa14.08□□□□□ -0.16
COL9A2-202ENST00000372748 GAREM2Q75VX8 874 aa14.08□□□□□ -0.16
COL9A2-202ENST00000372748 TMC8Q8IU68 726 aa14.08□□□□□ -0.16
COL9A2-202ENST00000372748 TCTE3Q8IZS6 198 aa14.08□□□□□ -0.16
COL9A2-202ENST00000372748 Q8N402 240 aa14.08□□□□□ -0.16
COL9A2-202ENST00000372748 FAM109AQ8N4B1 249 aa14.08□□□□□ -0.16
COL9A2-202ENST00000372748 C19orf18Q8NEA5 215 aa14.08□□□□□ -0.16
COL9A2-202ENST00000372748 PROKR2Q8NFJ6 384 aa14.08□□□□□ -0.16
COL9A2-202ENST00000372748 CLP1Q92989 425 aaKnown RBP14.08□□□□□ -0.16
COL9A2-202ENST00000372748 ZBED6CLQ96FA7 236 aaPredicted RBP14.08□□□□□ -0.16
COL9A2-202ENST00000372748 KATNB1Q9BVA0 655 aa14.08□□□□□ -0.16
COL9A2-202ENST00000372748 MRPL17Q9NRX2 175 aaKnown RBP14.08□□□□□ -0.16
COL9A2-202ENST00000372748 LSM7Q9UK45 103 aaKnown RBP14.08□□□□□ -0.16
COL9A2-202ENST00000372748 RPL36Q9Y3U8 105 aaKnown RBP14.08□□□□□ -0.16
COL9A2-202ENST00000372748 DOCK6Q96HP0 2047 aa14.08□□□□□ -0.16
COL9A2-202ENST00000372748 DSPPQ9NZW4 1301 aa14.08□□□□□ -0.16
COL9A2-202ENST00000372748 SLC16A8O95907 504 aa14.08□□□□□ -0.16
COL9A2-202ENST00000372748 TGFB1P01137 390 aa14.08□□□□□ -0.16
COL9A2-202ENST00000372748 IL1AP01583 271 aa14.08□□□□□ -0.16
COL9A2-202ENST00000372748 CYP2A6P11509 494 aaPredicted RBP14.08□□□□□ -0.16
COL9A2-202ENST00000372748 PCSK2P16519 638 aa14.08□□□□□ -0.16
COL9A2-202ENST00000372748 CPN2P22792 545 aa14.08□□□□□ -0.16
COL9A2-202ENST00000372748 GSTM5P46439 218 aa14.08□□□□□ -0.16
COL9A2-202ENST00000372748 BDKRB1P46663 353 aa14.08□□□□□ -0.16
COL9A2-202ENST00000372748 PREPP48147 710 aa14.08□□□□□ -0.16
COL9A2-202ENST00000372748 CSNK1DP48730 415 aa14.08□□□□□ -0.16
COL9A2-202ENST00000372748 UBE3AQ05086 875 aa14.08□□□□□ -0.16
COL9A2-202ENST00000372748 FCHO2Q0JRZ9 810 aa14.08□□□□□ -0.16
COL9A2-202ENST00000372748 CCDC85BQ15834 202 aaPredicted RBP14.08□□□□□ -0.16
COL9A2-202ENST00000372748 CRTC2Q53ET0 693 aaPredicted RBP14.08□□□□□ -0.16
COL9A2-202ENST00000372748 TRIQKQ629K1 86 aa14.08□□□□□ -0.16
COL9A2-202ENST00000372748 DEF8Q6ZN54 512 aa14.08□□□□□ -0.16
COL9A2-202ENST00000372748 CAMKMTQ7Z624 323 aa14.08□□□□□ -0.16
COL9A2-202ENST00000372748 TMPRSS11BQ86T26 416 aa14.08□□□□□ -0.16
COL9A2-202ENST00000372748 C11orf74Q86VG3 221 aa14.08□□□□□ -0.16
COL9A2-202ENST00000372748 CCDC28AQ8IWP9 274 aa14.08□□□□□ -0.16
COL9A2-202ENST00000372748 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.08□□□□□ -0.16
COL9A2-202ENST00000372748 OXR1Q8N573 874 aa14.08□□□□□ -0.16
COL9A2-202ENST00000372748 UPRTQ96BW1 309 aa14.08□□□□□ -0.16
COL9A2-202ENST00000372748 COQ7Q99807 217 aa14.08□□□□□ -0.16
COL9A2-202ENST00000372748 WFDC6Q9BQY6 131 aa14.08□□□□□ -0.16
COL9A2-202ENST00000372748 RSPO3Q9BXY4 272 aaPredicted RBP14.08□□□□□ -0.16
COL9A2-202ENST00000372748 LINC00597Q9H2U6 94 aa14.08□□□□□ -0.16
COL9A2-202ENST00000372748 OR51B5Q9H339 312 aa14.08□□□□□ -0.16
COL9A2-202ENST00000372748 REEP4Q9H6H4 257 aa14.08□□□□□ -0.16
COL9A2-202ENST00000372748 RC3H2Q9HBD1 1191 aaKnown RBP14.08□□□□□ -0.16
COL9A2-202ENST00000372748 MAT2BQ9NZL9 334 aa14.08□□□□□ -0.16
COL9A2-202ENST00000372748 LOC102723532A0A0G2JNH3 316 aa14.07□□□□□ -0.16
COL9A2-202ENST00000372748 H0YIV9 168 aa14.07□□□□□ -0.16
COL9A2-202ENST00000372748 PRKYO43930 277 aa14.07□□□□□ -0.16
COL9A2-202ENST00000372748 ALDH1A1P00352 501 aa14.07□□□□□ -0.16
COL9A2-202ENST00000372748 HLA-DMAP28067 261 aa14.07□□□□□ -0.16
COL9A2-202ENST00000372748 SNRPGP62308 76 aaKnown RBP14.07□□□□□ -0.16
COL9A2-202ENST00000372748 SNRPD1P62314 119 aaKnown RBP14.07□□□□□ -0.16
COL9A2-202ENST00000372748 C2orf80Q0P641 193 aa14.07□□□□□ -0.16
COL9A2-202ENST00000372748 HEPACAMQ14CZ8 416 aa14.07□□□□□ -0.16
COL9A2-202ENST00000372748 GRHL2Q6ISB3 625 aa14.07□□□□□ -0.16
COL9A2-202ENST00000372748 USP45Q70EL2 814 aa14.07□□□□□ -0.16
COL9A2-202ENST00000372748 CHST14Q8NCH0 376 aa14.07□□□□□ -0.16
COL9A2-202ENST00000372748 GATAD2BQ8WXI9 593 aa14.07□□□□□ -0.16
COL9A2-202ENST00000372748 PPCDCQ96CD2 204 aa14.07□□□□□ -0.16
COL9A2-202ENST00000372748 MCOLN1Q9GZU1 580 aa14.07□□□□□ -0.16
COL9A2-202ENST00000372748 MKRN2Q9H000 416 aaKnown RBP14.07□□□□□ -0.16
COL9A2-202ENST00000372748 POLR2J3Q9H1A7 115 aaKnown RBP14.07□□□□□ -0.16
COL9A2-202ENST00000372748 TMEM38AQ9H6F2 299 aa14.07□□□□□ -0.16
COL9A2-202ENST00000372748 TRIM45Q9H8W5 580 aaPredicted RBP14.07□□□□□ -0.16
COL9A2-202ENST00000372748 B3GAT2Q9NPZ5 323 aa14.07□□□□□ -0.16
COL9A2-202ENST00000372748 B4GALT6Q9UBX8 382 aa14.07□□□□□ -0.16
COL9A2-202ENST00000372748 AP1M2Q9Y6Q5 423 aa14.07□□□□□ -0.16
COL9A2-202ENST00000372748 LOC105371267A0A1B0GV96 52 aa14.07□□□□□ -0.16
COL9A2-202ENST00000372748 FAM240BA0A1B0GVZ2 78 aa14.07□□□□□ -0.16
COL9A2-202ENST00000372748 IFNA14P01570 189 aa14.07□□□□□ -0.16
COL9A2-202ENST00000372748 HLA-FP30511 346 aa14.07□□□□□ -0.16
COL9A2-202ENST00000372748 MAPK8P45983 427 aa14.07□□□□□ -0.16
COL9A2-202ENST00000372748 SLC9A3P48764 834 aa14.07□□□□□ -0.16
COL9A2-202ENST00000372748 LSM11P83369 360 aaKnown RBP eCLIP14.07□□□□□ -0.165e-7■■■■□ 22.7
COL9A2-202ENST00000372748 MEF2AQ02078 507 aaPredicted RBP14.07□□□□□ -0.16
COL9A2-202ENST00000372748 RBBP4Q09028 425 aa14.07□□□□□ -0.16
COL9A2-202ENST00000372748 ZNF763Q0D2J5 394 aa14.07□□□□□ -0.16
COL9A2-202ENST00000372748 TARDBPQ13148 414 aaKnown RBP eCLIP14.07□□□□□ -0.16
COL9A2-202ENST00000372748 MEDAGQ5VYS4 303 aa14.07□□□□□ -0.16
COL9A2-202ENST00000372748 TNFAIP8L2Q6P589 184 aaPredicted RBP14.07□□□□□ -0.16
COL9A2-202ENST00000372748 CNIH2Q6PI25 160 aa14.07□□□□□ -0.16
COL9A2-202ENST00000372748 COMMD6Q7Z4G1 85 aa14.07□□□□□ -0.16
COL9A2-202ENST00000372748 AMIGO1Q86WK6 493 aa14.07□□□□□ -0.16
COL9A2-202ENST00000372748 WDR48Q8TAF3 677 aa14.07□□□□□ -0.16
COL9A2-202ENST00000372748 NEIL2Q969S2 332 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms