RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 DUSP21Q9H596 190 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 IL1RAPQ9NPH3 570 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 DCDC2Q9UHG0 476 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 KIF25Q9UIL4 384 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 TSR3Q9UJK0 312 aaKnown RBP6.53□□□□□ -1.36
CSDE1-204ENST00000369530 ENTPD2Q9Y5L3 495 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 PSAT1Q9Y617 370 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 A0A075B6Q4 140 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 LOC100653049A0A140TA62 436 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 TMEM238LA0A1B0GVL6 79 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 A0A1B0GVT2 93 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 PRORSD1PA6NEY8 169 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 C4orf47A7E2U8 309 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 AIM2O14862 343 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 STX7O15400 261 aaKnown RBP6.53□□□□□ -1.36
CSDE1-204ENST00000369530 LYPLA1O75608 230 aaPredicted RBP6.53□□□□□ -1.36
CSDE1-204ENST00000369530 KRT34O76011 436 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 AP2A1O95782 977 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 CD1EP15812 388 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 ZNF8P17098 575 aaPredicted RBP6.53□□□□□ -1.36
CSDE1-204ENST00000369530 BPIP17213 487 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 FASP25445 335 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 CD1CP29017 333 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 RENBPP51606 427 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 PKNOX1P55347 436 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 GPR33Q49SQ1 333 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 FNDC3BQ53EP0 1204 aaKnown RBP6.53□□□□□ -1.36
CSDE1-204ENST00000369530 ARMC4Q5T2S8 1044 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 P2RY8Q86VZ1 359 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 GLB1L3Q8NCI6 653 aaPredicted RBP6.53□□□□□ -1.36
CSDE1-204ENST00000369530 MAPK15Q8TD08 544 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 ROPN1LQ96C74 230 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 WDFY2Q96P53 400 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 OR5M11Q96RB7 305 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 VAT1Q99536 393 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 BARD1Q99728 777 aaKnown RBP6.53□□□□□ -1.36
CSDE1-204ENST00000369530 TBL1YQ9BQ87 522 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 NUSAP1Q9BXS6 441 aaKnown RBP6.53□□□□□ -1.36
CSDE1-204ENST00000369530 ASPSCR1Q9BZE9 553 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 GLOD4Q9HC38 313 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 FGF22Q9HCT0 170 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 RANGRFQ9HD47 186 aaPredicted RBP6.53□□□□□ -1.36
CSDE1-204ENST00000369530 SPAG4Q9NPE6 437 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 EIF2B4Q9UI10 523 aaKnown RBP6.53□□□□□ -1.36
CSDE1-204ENST00000369530 SLC25A13Q9UJS0 675 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 PDE10AQ9Y233 779 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 INVSQ9Y283 1065 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 PEX16Q9Y5Y5 336 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 KCNMB2Q9Y691 235 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 DCHS2Q6V1P9 2916 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 UBA6A0AVT1 1052 aaPredicted RBP6.52□□□□□ -1.37
CSDE1-204ENST00000369530 CCDC154A6NI56 674 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 PCP4L1A6NKN8 68 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 OR2B3O76000 313 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 C2P06681 752 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 PAMP19021 973 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 CPN2P22792 545 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 NMBRP28336 390 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 PIK3CBP42338 1070 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 CARTPTQ16568 116 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 PPP1R3AQ16821 1122 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 COL28A1Q2UY09 1125 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 TRIM61Q5EBN2 209 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 ZC3H12BQ5HYM0 836 aaKnown RBP6.52□□□□□ -1.37
CSDE1-204ENST00000369530 PABPC1L2AQ5JQF8 200 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 LAYNQ6UX15 382 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 RRM2BQ7LG56 351 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 UBE2J2Q8N2K1 259 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 SPATA6LQ8N4H0 392 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 CLRN3Q8NCR9 226 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 MCFD2Q8NI22 146 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 SGTBQ96EQ0 304 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 SORCS2Q96PQ0 1159 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 SPATA9Q9BWV2 254 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 BCL2L14Q9BZR8 327 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 B4GALT6Q9UBX8 382 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 SLC23A1Q9UHI7 598 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 MDC1Q14676 2089 aaKnown RBP6.52□□□□□ -1.37
CSDE1-204ENST00000369530 KIF26BQ2KJY2 2108 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 A0A0B4J293 547 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 A0A0U1RQS6 177 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 AP3D1O14617 1153 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 TIPRLO75663 272 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 IFNA4P05014 189 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 ATP6V1B2P21281 511 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 FMO4P31512 558 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 CD96P40200 585 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 HNF4AP41235 474 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 WASP42768 502 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 GDI2P50395 445 aaKnown RBP6.52□□□□□ -1.37
CSDE1-204ENST00000369530 ALDH3A2P51648 485 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 WNT3AP56704 352 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 SNRPD1P62314 119 aaKnown RBP6.52□□□□□ -1.37
CSDE1-204ENST00000369530 DAB2P98082 770 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 DSC2Q02487 901 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 ZNF470Q6ECI4 717 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 SERPINA13PQ6UXR4 307 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 USP45Q70EL2 814 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 TMPRSS12Q86WS5 348 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 PNPLA1Q8N8W4 532 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms