RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 CCDC90BQ9GZT6 254 aa13.28□□□□□ -0.28
USF1-202ENST00000368020 SLAMF7Q9NQ25 335 aa13.28□□□□□ -0.28
USF1-202ENST00000368020 SIRT3Q9NTG7 399 aaPredicted RBP13.28□□□□□ -0.28
USF1-202ENST00000368020 PLCXD1Q9NUJ7 323 aa13.28□□□□□ -0.28
USF1-202ENST00000368020 DNAAF2Q9NVR5 837 aaKnown RBP13.28□□□□□ -0.28
USF1-202ENST00000368020 KCND3Q9UK17 655 aa13.28□□□□□ -0.28
USF1-202ENST00000368020 TECTAO75443 2155 aa13.28□□□□□ -0.28
USF1-202ENST00000368020 LRRC72A6NJI9 287 aa13.27□□□□□ -0.28
USF1-202ENST00000368020 SLC31A1O15431 190 aa13.27□□□□□ -0.28
USF1-202ENST00000368020 ERI3O43414 337 aaKnown RBP13.27□□□□□ -0.28
USF1-202ENST00000368020 FAM20BO75063 409 aa13.27□□□□□ -0.28
USF1-202ENST00000368020 NDUFS2O75306 463 aa13.27□□□□□ -0.28
USF1-202ENST00000368020 CCNB2O95067 398 aa13.27□□□□□ -0.28
USF1-202ENST00000368020 BCHEP06276 602 aa13.27□□□□□ -0.28
USF1-202ENST00000368020 HNRNPA2B1P22626 353 aaKnown RBP13.27□□□□□ -0.28
USF1-202ENST00000368020 GPC1P35052 558 aa13.27□□□□□ -0.28
USF1-202ENST00000368020 LIMS1P48059 325 aa13.27□□□□□ -0.28
USF1-202ENST00000368020 YPEL5P62699 121 aa13.27□□□□□ -0.28
USF1-202ENST00000368020 ABHD17CQ6PCB6 329 aa13.27□□□□□ -0.28
USF1-202ENST00000368020 MAMSTRQ6ZN01 415 aa13.27□□□□□ -0.28
USF1-202ENST00000368020 TSEN54Q7Z6J9 526 aaKnown RBP13.27□□□□□ -0.28
USF1-202ENST00000368020 AMIGO1Q86WK6 493 aa13.27□□□□□ -0.28
USF1-202ENST00000368020 ANKRD13BQ86YJ7 626 aa13.27□□□□□ -0.28
USF1-202ENST00000368020 SAMD14Q8IZD0 417 aaPredicted RBP13.27□□□□□ -0.28
USF1-202ENST00000368020 MMP21Q8N119 569 aa13.27□□□□□ -0.28
USF1-202ENST00000368020 HORMAD2Q8N7B1 307 aa13.27□□□□□ -0.28
USF1-202ENST00000368020 OR56A1Q8NGH5 318 aa13.27□□□□□ -0.28
USF1-202ENST00000368020 ZFPM2Q8WW38 1151 aa13.27□□□□□ -0.28
USF1-202ENST00000368020 LCN9Q8WX39 176 aa13.27□□□□□ -0.28
USF1-202ENST00000368020 EDAQ92838 391 aa13.27□□□□□ -0.28
USF1-202ENST00000368020 SLC35G5Q96KT7 338 aa13.27□□□□□ -0.28
USF1-202ENST00000368020 TEFMQ96QE5 360 aaKnown RBP13.27□□□□□ -0.28
USF1-202ENST00000368020 FOXQ1Q9C009 403 aa13.27□□□□□ -0.28
USF1-202ENST00000368020 CHRDQ9H2X0 955 aa13.27□□□□□ -0.28
USF1-202ENST00000368020 XKR8Q9H6D3 395 aa13.27□□□□□ -0.28
USF1-202ENST00000368020 FGF22Q9HCT0 170 aa13.27□□□□□ -0.28
USF1-202ENST00000368020 SLC6A20Q9NP91 592 aa13.27□□□□□ -0.28
USF1-202ENST00000368020 PRDM9Q9NQV7 894 aa13.27□□□□□ -0.28
USF1-202ENST00000368020 PRDM8Q9NQV8 689 aa13.27□□□□□ -0.28
USF1-202ENST00000368020 TEX10Q9NXF1 929 aaPredicted RBP13.27□□□□□ -0.28
USF1-202ENST00000368020 ENTPD4Q9Y227 616 aa13.27□□□□□ -0.28
USF1-202ENST00000368020 SH3GLB1Q9Y371 365 aa13.27□□□□□ -0.28
USF1-202ENST00000368020 PCDHGA4Q9Y5G9 962 aa13.27□□□□□ -0.28
USF1-202ENST00000368020 MDC1Q14676 2089 aaKnown RBP13.27□□□□□ -0.29
USF1-202ENST00000368020 OR52A4PA6NMU1 304 aa13.27□□□□□ -0.29
USF1-202ENST00000368020 HMGN4O00479 90 aa13.27□□□□□ -0.29
USF1-202ENST00000368020 ATE1O95260 518 aa13.27□□□□□ -0.29
USF1-202ENST00000368020 BCL10O95999 233 aa13.27□□□□□ -0.29
USF1-202ENST00000368020 COL9A1P20849 921 aa13.27□□□□□ -0.29
USF1-202ENST00000368020 MATN1P21941 496 aa13.27□□□□□ -0.29
USF1-202ENST00000368020 MAT2AP31153 395 aaKnown RBP13.27□□□□□ -0.29
USF1-202ENST00000368020 ST13P50502 369 aaKnown RBP13.27□□□□□ -0.29
USF1-202ENST00000368020 PRR5P85299 388 aa13.27□□□□□ -0.29
USF1-202ENST00000368020 RGS1Q08116 209 aa13.27□□□□□ -0.29
USF1-202ENST00000368020 NFATC3Q12968 1075 aa13.27□□□□□ -0.29
USF1-202ENST00000368020 TP53BP2Q13625 1128 aa13.27□□□□□ -0.29
USF1-202ENST00000368020 KIR2DS3Q14952 304 aa13.27□□□□□ -0.29
USF1-202ENST00000368020 NPTX1Q15818 432 aa13.27□□□□□ -0.29
USF1-202ENST00000368020 MRM1Q6IN84 353 aaKnown RBP13.27□□□□□ -0.29
USF1-202ENST00000368020 ZNF425Q6IV72 752 aa13.27□□□□□ -0.29
USF1-202ENST00000368020 TMEM92Q6UXU6 159 aa13.27□□□□□ -0.29
USF1-202ENST00000368020 Q6ZS52 159 aa13.27□□□□□ -0.29
USF1-202ENST00000368020 LINC00299Q6ZSB3 139 aa13.27□□□□□ -0.29
USF1-202ENST00000368020 SPEM1Q8N4L4 309 aa13.27□□□□□ -0.29
USF1-202ENST00000368020 LINC00471Q8N535 108 aa13.27□□□□□ -0.29
USF1-202ENST00000368020 SLC5A8Q8N695 610 aa13.27□□□□□ -0.29
USF1-202ENST00000368020 BBS10Q8TAM1 723 aa13.27□□□□□ -0.29
USF1-202ENST00000368020 GAB3Q8WWW8 586 aa13.27□□□□□ -0.29
USF1-202ENST00000368020 MYDGFQ969H8 173 aa13.27□□□□□ -0.29
USF1-202ENST00000368020 TMEM19Q96HH6 336 aa13.27□□□□□ -0.29
USF1-202ENST00000368020 ZNF354BQ96LW1 612 aa13.27□□□□□ -0.29
USF1-202ENST00000368020 AMDHD1Q96NU7 426 aa13.27□□□□□ -0.29
USF1-202ENST00000368020 BTBD2Q9BX70 525 aa13.27□□□□□ -0.29
USF1-202ENST00000368020 LIN28AQ9H9Z2 209 aaKnown RBP13.27□□□□□ -0.29
USF1-202ENST00000368020 PLGRKTQ9HBL7 147 aa13.27□□□□□ -0.29
USF1-202ENST00000368020 POLMQ9NP87 494 aaPredicted RBP13.27□□□□□ -0.29
USF1-202ENST00000368020 ACER3Q9NUN7 267 aa13.27□□□□□ -0.29
USF1-202ENST00000368020 ANKMY1Q9P2S6 941 aa13.27□□□□□ -0.29
USF1-202ENST00000368020 ENPP5Q9UJA9 477 aa13.27□□□□□ -0.29
USF1-202ENST00000368020 TMCC3Q9ULS5 477 aa13.27□□□□□ -0.29
USF1-202ENST00000368020 PCDHGA6Q9Y5G7 932 aa13.27□□□□□ -0.29
USF1-202ENST00000368020 ZDBF2Q9HCK1 2354 aa13.26□□□□□ -0.29
USF1-202ENST00000368020 PRAMEF33A0A0G2JMD5 474 aa13.26□□□□□ -0.29
USF1-202ENST00000368020 URADA6NGE7 173 aa13.26□□□□□ -0.29
USF1-202ENST00000368020 HAT1O14929 419 aa13.26□□□□□ -0.29
USF1-202ENST00000368020 SLC22A1O15245 554 aa13.26□□□□□ -0.29
USF1-202ENST00000368020 LATO43561 262 aa13.26□□□□□ -0.29
USF1-202ENST00000368020 XPNPEP2O43895 674 aa13.26□□□□□ -0.29
USF1-202ENST00000368020 PRAMEF10O60809 474 aa13.26□□□□□ -0.29
USF1-202ENST00000368020 MFN2O95140 757 aa13.26□□□□□ -0.29
USF1-202ENST00000368020 CHRM5P08912 532 aaPredicted RBP13.26□□□□□ -0.29
USF1-202ENST00000368020 CD247P20963 164 aa13.26□□□□□ -0.29
USF1-202ENST00000368020 ATP5A1P25705 553 aaKnown RBP13.26□□□□□ -0.29
USF1-202ENST00000368020 FMO3P31513 532 aa13.26□□□□□ -0.29
USF1-202ENST00000368020 MPIP34949 423 aa13.26□□□□□ -0.29
USF1-202ENST00000368020 OR1E2P47887 323 aa13.26□□□□□ -0.29
USF1-202ENST00000368020 CRISP3P54108 245 aa13.26□□□□□ -0.29
USF1-202ENST00000368020 CASP9P55211 416 aa13.26□□□□□ -0.29
USF1-202ENST00000368020 HPCAP84074 193 aa13.26□□□□□ -0.29
USF1-202ENST00000368020 EMX1Q04741 257 aaPredicted RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms