RNA–Protein interactions for RNA: ENST00000366813.1

H3F3A-201, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-201ENST00000366813 PLEKHF2Q9H8W4 249 aa6.7□□□□□ -1.34
H3F3A-201ENST00000366813 PDFQ9HBH1 243 aa6.7□□□□□ -1.34
H3F3A-201ENST00000366813 ZNF160Q9HCG1 818 aa6.7□□□□□ -1.34
H3F3A-201ENST00000366813 EXOC1Q9NV70 894 aa6.7□□□□□ -1.34
H3F3A-201ENST00000366813 ATXN10Q9UBB4 475 aa6.7□□□□□ -1.34
H3F3A-201ENST00000366813 DHCR7Q9UBM7 475 aaKnown RBP6.7□□□□□ -1.34
H3F3A-201ENST00000366813 WDR37Q9Y2I8 494 aa6.7□□□□□ -1.34
H3F3A-201ENST00000366813 MRPS2Q9Y399 296 aaKnown RBP6.7□□□□□ -1.34
H3F3A-201ENST00000366813 TCRBV7S3A2A0A539 114 aa6.69□□□□□ -1.34
H3F3A-201ENST00000366813 OR6C74A6NCV1 312 aa6.69□□□□□ -1.34
H3F3A-201ENST00000366813 FAM90A7PA6NKC0 464 aa6.69□□□□□ -1.34
H3F3A-201ENST00000366813 FAM90A22PA8MWA6 464 aa6.69□□□□□ -1.34
H3F3A-201ENST00000366813 FAM90A12PA8MX19 464 aa6.69□□□□□ -1.34
H3F3A-201ENST00000366813 FAM90A23PA8MXZ1 464 aa6.69□□□□□ -1.34
H3F3A-201ENST00000366813 PALMO75781 387 aa6.69□□□□□ -1.34
H3F3A-201ENST00000366813 HLA-DQA2P01906 255 aa6.69□□□□□ -1.34
H3F3A-201ENST00000366813 HBQ1P09105 142 aa6.69□□□□□ -1.34
H3F3A-201ENST00000366813 IL4RP24394 825 aa6.69□□□□□ -1.34
H3F3A-201ENST00000366813 ARSEP51690 589 aa6.69□□□□□ -1.34
H3F3A-201ENST00000366813 GALNT3Q14435 633 aa6.69□□□□□ -1.34
H3F3A-201ENST00000366813 NFIL3Q16649 462 aa6.69□□□□□ -1.34
H3F3A-201ENST00000366813 NKAIN1Q4KMZ8 207 aa6.69□□□□□ -1.34
H3F3A-201ENST00000366813 SH2D4BQ5SQS7 431 aa6.69□□□□□ -1.34
H3F3A-201ENST00000366813 TRNP1Q6NT89 227 aa6.69□□□□□ -1.34
H3F3A-201ENST00000366813 SHC4Q6S5L8 630 aa6.69□□□□□ -1.34
H3F3A-201ENST00000366813 LRIG3Q6UXM1 1119 aa6.69□□□□□ -1.34
H3F3A-201ENST00000366813 CENPQQ7L2Z9 268 aaPredicted RBP6.69□□□□□ -1.34
H3F3A-201ENST00000366813 NAXEQ8NCW5 288 aa6.69□□□□□ -1.34
H3F3A-201ENST00000366813 ZNF397Q8NF99 534 aaPredicted RBP6.69□□□□□ -1.34
H3F3A-201ENST00000366813 CCDC110Q8TBZ0 833 aa6.69□□□□□ -1.34
H3F3A-201ENST00000366813 TBC1D31Q96DN5 1066 aa6.69□□□□□ -1.34
H3F3A-201ENST00000366813 OR2AG1Q9H205 316 aa6.69□□□□□ -1.34
H3F3A-201ENST00000366813 CARD9Q9H257 536 aa6.69□□□□□ -1.34
H3F3A-201ENST00000366813 UPB1Q9UBR1 384 aa6.69□□□□□ -1.34
H3F3A-201ENST00000366813 HSF4Q9ULV5 492 aa6.69□□□□□ -1.34
H3F3A-201ENST00000366813 MPDZO75970 2070 aa6.69□□□□□ -1.34
H3F3A-201ENST00000366813 SH2D7A6NKC9 451 aaPredicted RBP6.68□□□□□ -1.34
H3F3A-201ENST00000366813 POLR2DO15514 142 aaKnown RBP6.68□□□□□ -1.34
H3F3A-201ENST00000366813 MED7O43513 233 aa6.68□□□□□ -1.34
H3F3A-201ENST00000366813 PRAMEF11O60813 436 aa6.68□□□□□ -1.34
H3F3A-201ENST00000366813 UQCRHP07919 91 aa6.68□□□□□ -1.34
H3F3A-201ENST00000366813 ZNF7P17097 686 aaPredicted RBP6.68□□□□□ -1.34
H3F3A-201ENST00000366813 CDH3P22223 829 aa6.68□□□□□ -1.34
H3F3A-201ENST00000366813 GJC1P36383 396 aa6.68□□□□□ -1.34
H3F3A-201ENST00000366813 PGM1P36871 562 aa6.68□□□□□ -1.34
H3F3A-201ENST00000366813 MTNR1AP48039 350 aa6.68□□□□□ -1.34
H3F3A-201ENST00000366813 CPA2P48052 419 aa6.68□□□□□ -1.34
H3F3A-201ENST00000366813 PMPCAQ10713 525 aa6.68□□□□□ -1.34
H3F3A-201ENST00000366813 RBBP7Q16576 425 aa6.68□□□□□ -1.34
H3F3A-201ENST00000366813 MEA1Q16626 185 aa6.68□□□□□ -1.34
H3F3A-201ENST00000366813 AP5B1Q2VPB7 878 aa6.68□□□□□ -1.34
H3F3A-201ENST00000366813 PTPN20Q4JDL3 420 aa6.68□□□□□ -1.34
H3F3A-201ENST00000366813 ZNF766Q5HY98 468 aa6.68□□□□□ -1.34
H3F3A-201ENST00000366813 ATG9BQ674R7 924 aa6.68□□□□□ -1.34
H3F3A-201ENST00000366813 LRRC66Q68CR7 880 aa6.68□□□□□ -1.34
H3F3A-201ENST00000366813 TMEM211Q6ICI0 200 aa6.68□□□□□ -1.34
H3F3A-201ENST00000366813 AADACL2Q6P093 401 aa6.68□□□□□ -1.34
H3F3A-201ENST00000366813 DEF8Q6ZN54 512 aa6.68□□□□□ -1.34
H3F3A-201ENST00000366813 HIPK1Q86Z02 1210 aa6.68□□□□□ -1.34
H3F3A-201ENST00000366813 SIAH3Q8IW03 269 aa6.68□□□□□ -1.34
H3F3A-201ENST00000366813 GHDCQ8N2G8 530 aa6.68□□□□□ -1.34
H3F3A-201ENST00000366813 TMEM217Q8N7C4 229 aa6.68□□□□□ -1.34
H3F3A-201ENST00000366813 RTL3Q8N8U3 475 aaKnown RBP6.68□□□□□ -1.34
H3F3A-201ENST00000366813 C1orf131Q8NDD1 294 aaKnown RBP6.68□□□□□ -1.34
H3F3A-201ENST00000366813 SCRN2Q96FV2 425 aa6.68□□□□□ -1.34
H3F3A-201ENST00000366813 CFAP57Q96MR6 1250 aa6.68□□□□□ -1.34
H3F3A-201ENST00000366813 AP1M1Q9BXS5 423 aa6.68□□□□□ -1.34
H3F3A-201ENST00000366813 CADM1Q9BY67 442 aaKnown RBP6.68□□□□□ -1.34
H3F3A-201ENST00000366813 HES7Q9BYE0 225 aa6.68□□□□□ -1.34
H3F3A-201ENST00000366813 SYNCQ9H7C4 482 aa6.68□□□□□ -1.34
H3F3A-201ENST00000366813 SYTL2Q9HCH5 934 aa6.68□□□□□ -1.34
H3F3A-201ENST00000366813 KLHL1Q9NR64 748 aa6.68□□□□□ -1.34
H3F3A-201ENST00000366813 PAPOLBQ9NRJ5 636 aaKnown RBP6.68□□□□□ -1.34
H3F3A-201ENST00000366813 FAM207AQ9NSI2 230 aaPredicted RBP6.68□□□□□ -1.34
H3F3A-201ENST00000366813 ZNF69Q9UC07 566 aa6.68□□□□□ -1.34
H3F3A-201ENST00000366813 OR5H15A6NDH6 313 aa6.67□□□□□ -1.34
H3F3A-201ENST00000366813 CLDN4O14493 209 aa6.67□□□□□ -1.34
H3F3A-201ENST00000366813 HCRTR1O43613 425 aa6.67□□□□□ -1.34
H3F3A-201ENST00000366813 UGDHO60701 494 aa6.67□□□□□ -1.34
H3F3A-201ENST00000366813 MLYCDO95822 493 aa6.67□□□□□ -1.34
H3F3A-201ENST00000366813 POLR2CP19387 275 aaPredicted RBP6.67□□□□□ -1.34
H3F3A-201ENST00000366813 NUP107P57740 925 aa6.67□□□□□ -1.34
H3F3A-201ENST00000366813 YBEYP58557 167 aaPredicted RBP6.67□□□□□ -1.34
H3F3A-201ENST00000366813 TRAF2Q12933 501 aa6.67□□□□□ -1.34
H3F3A-201ENST00000366813 TBX2Q13207 712 aaPredicted RBP6.67□□□□□ -1.34
H3F3A-201ENST00000366813 IL13RA2Q14627 380 aa6.67□□□□□ -1.34
H3F3A-201ENST00000366813 SLC39A14Q15043 492 aa6.67□□□□□ -1.34
H3F3A-201ENST00000366813 PARP15Q460N3 678 aa6.67□□□□□ -1.34
H3F3A-201ENST00000366813 RHBDD2Q6NTF9 364 aa6.67□□□□□ -1.34
H3F3A-201ENST00000366813 GJB7Q6PEY0 223 aa6.67□□□□□ -1.34
H3F3A-201ENST00000366813 WASH2PQ6VEQ5 465 aa6.67□□□□□ -1.34
H3F3A-201ENST00000366813 CDHR3Q6ZTQ4 885 aa6.67□□□□□ -1.34
H3F3A-201ENST00000366813 BNIPLQ7Z465 357 aa6.67□□□□□ -1.34
H3F3A-201ENST00000366813 OOSP2Q86WS3 158 aa6.67□□□□□ -1.34
H3F3A-201ENST00000366813 PYROXD2Q8N2H3 581 aa6.67□□□□□ -1.34
H3F3A-201ENST00000366813 C8orf44Q96CB5 159 aa6.67□□□□□ -1.34
H3F3A-201ENST00000366813 MCCC1Q96RQ3 725 aaPredicted RBP6.67□□□□□ -1.34
H3F3A-201ENST00000366813 USP28Q96RU2 1077 aa6.67□□□□□ -1.34
H3F3A-201ENST00000366813 TMEM45AQ9NWC5 275 aa6.67□□□□□ -1.34
H3F3A-201ENST00000366813 PSMD13Q9UNM6 376 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms