RNA–Protein interactions for RNA: ENST00000364426.1

RNU4-41P-201, Transcript of RNA, U4 small nuclear 41, pseudogene, humanhuman

BASIC

Gene RNU4-41P, Length 143 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-41P-201ENST00000364426 PFASO15067 1338 aa1.3□□□□□ -2.2
RNU4-41P-201ENST00000364426 CSMD2Q7Z408 3487 aa1.3□□□□□ -2.2
RNU4-41P-201ENST00000364426 CEP162Q5TB80 1403 aa1.3□□□□□ -2.2
RNU4-41P-201ENST00000364426 CCDC141Q6ZP82 1450 aa1.3□□□□□ -2.2
RNU4-41P-201ENST00000364426 PRRC2CQ9Y520 2896 aaKnown RBP1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 LOC285556D6RIA3 1793 aa1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 RLFQ13129 1914 aa1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 TRAV18A0A075B6X5 111 aa1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 MTMR11A4FU01 709 aa1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 URADA6NGE7 173 aa1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 SHISA7A6NL88 538 aa1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 F8VVB4 439 aa1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 F8VWA3 439 aa1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 MAGEB2O15479 319 aa1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 TNFSF12O43508 249 aa1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 TLX2O43763 284 aaPredicted RBP1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 SH3BGRLO75368 114 aa1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 NXPH4O95158 308 aa1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 PENKP01210 267 aaPredicted RBP1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 C9P02748 559 aa1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 MELTFP08582 738 aa1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 CCDC175P0C221 793 aa1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 SPP1P10451 314 aa1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 FOLR2P14207 255 aa1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 GOT1P17174 413 aa1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 CTNNA2P26232 953 aa1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 RPL9P32969 192 aaKnown RBP1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 ETV5P41161 510 aa1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 RAD52P43351 418 aa1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 OR3A3P47888 321 aa1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 RPL34P49207 117 aaKnown RBP1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 RGS7P49802 495 aa1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 MFAP3P55082 362 aa1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 NDUFV3P56181 108 aaKnown RBP1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 TRA2BP62995 288 aaKnown RBP1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 SRPXP78539 464 aa1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 IL10RBQ08334 325 aa1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 COG2Q14746 738 aa1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 RASA2Q15283 850 aa1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 KYNUQ16719 465 aa1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 UGCGQ16739 394 aa1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 EIPR1Q53HC9 387 aa1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 AGAP7PQ5VUJ5 663 aa1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 CLEC18BQ6UXF7 455 aa1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 VITQ6UXI7 678 aa1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 RAPH1Q70E73 1250 aa1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 TIPARPQ7Z3E1 657 aaKnown RBP1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 CCDC186Q7Z3E2 898 aa1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 PIGWQ7Z7B1 504 aa1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 KCNMB4Q86W47 210 aa1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 CROCCP3Q8IVE0 287 aa1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 ZBED8Q8IZ13 594 aa1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 NME8Q8N427 588 aa1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 C4orf32Q8N8J7 132 aa1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 TMEM105Q8N8V8 129 aa1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 SUMF1Q8NBK3 374 aa1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 OR6J1Q8NGC5 347 aa1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 RHOXF1Q8NHV9 184 aa1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 MRPS27Q92552 414 aaKnown RBP1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 P2RX5Q93086 422 aa1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 AK8Q96MA6 479 aa1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 C1orf147Q96MC9 270 aaPredicted RBP1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 SPATA33Q96N06 139 aa1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 NEDD4LQ96PU5 975 aa1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 PI4K2AQ9BTU6 479 aa1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 KATNB1Q9BVA0 655 aa1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 PAPOLGQ9BWT3 736 aaKnown RBP1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 UPF3BQ9BZI7 483 aaKnown RBP1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 LRRCC1Q9C099 1032 aa1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 STRADBQ9C0K7 418 aa1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 ADNPQ9H2P0 1102 aa1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 C10orf88Q9H8K7 445 aa1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 SP140LQ9H930 580 aa1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 KCNK13Q9HB14 408 aa1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 C3orf14Q9HBI5 128 aa1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 ANKEF1Q9NU02 776 aa1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 NKIRAS2Q9NYR9 191 aa1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 TSPAN16Q9UKR8 245 aa1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 AGTPBP1Q9UPW5 1226 aa1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 RUVBL2Q9Y230 463 aaKnown RBP1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 NCKAP1Q9Y2A7 1128 aa1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 MTCH2Q9Y6C9 303 aa1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 NAIPQ13075 1403 aa1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 KIF27Q86VH2 1401 aa1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 APCP25054 2843 aa1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 NIPBLQ6KC79 2804 aaeCLIP1.29□□□□□ -2.2
RNU4-41P-201ENST00000364426 URB1O60287 2271 aaKnown RBP1.28□□□□□ -2.2
RNU4-41P-201ENST00000364426 IGHV3-20A0A0C4DH32 117 aa1.28□□□□□ -2.2
RNU4-41P-201ENST00000364426 IGHV3-38A0A0C4DH36 116 aa1.28□□□□□ -2.2
RNU4-41P-201ENST00000364426 HSFX4A0A1B0GTS1 333 aaPredicted RBP1.28□□□□□ -2.2
RNU4-41P-201ENST00000364426 HSFX3A0A1B0GWH4 333 aaPredicted RBP1.28□□□□□ -2.2
RNU4-41P-201ENST00000364426 TSPY2A6NKD2 308 aa1.28□□□□□ -2.2
RNU4-41P-201ENST00000364426 ARHGEF33A8MVX0 844 aa1.28□□□□□ -2.2
RNU4-41P-201ENST00000364426 E5RGE8 158 aa1.28□□□□□ -2.2
RNU4-41P-201ENST00000364426 E9PAM4 449 aa1.28□□□□□ -2.2
RNU4-41P-201ENST00000364426 NPIPA3F8WFD2 350 aa1.28□□□□□ -2.2
RNU4-41P-201ENST00000364426 RTCAO00442 366 aaKnown RBP1.28□□□□□ -2.2
RNU4-41P-201ENST00000364426 PHOX2AO14813 284 aa1.28□□□□□ -2.2
RNU4-41P-201ENST00000364426 P4HA2O15460 535 aa1.28□□□□□ -2.2
RNU4-41P-201ENST00000364426 KIF5CO60282 957 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms