RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 GJD2Q9UKL4 321 aa15.39■□□□□ 0.05
COL18A1-203ENST00000359759 STUB1Q9UNE7 303 aa15.39■□□□□ 0.05
COL18A1-203ENST00000359759 ARPC4-TTLL3A0A0A6YYG9 625 aa15.39■□□□□ 0.05
COL18A1-203ENST00000359759 A6NLC8 198 aa15.39■□□□□ 0.05
COL18A1-203ENST00000359759 PEX12O00623 359 aa15.39■□□□□ 0.05
COL18A1-203ENST00000359759 CREBL2O60519 120 aaPredicted RBP15.39■□□□□ 0.05
COL18A1-203ENST00000359759 SYNGR4O95473 234 aa15.39■□□□□ 0.05
COL18A1-203ENST00000359759 OR8U9P0C7N5 309 aa15.39■□□□□ 0.05
COL18A1-203ENST00000359759 NR2C1P13056 603 aa15.39■□□□□ 0.05
COL18A1-203ENST00000359759 DPP6P42658 865 aa15.39■□□□□ 0.05
COL18A1-203ENST00000359759 PTH2RP49190 550 aa15.39■□□□□ 0.05
COL18A1-203ENST00000359759 POU3F4P49335 361 aa15.39■□□□□ 0.05
COL18A1-203ENST00000359759 BCL2L15Q5TBC7 163 aa15.39■□□□□ 0.05
COL18A1-203ENST00000359759 PDZD9Q8IXQ8 264 aa15.39■□□□□ 0.05
COL18A1-203ENST00000359759 CMTM8Q8IZV2 173 aa15.39■□□□□ 0.05
COL18A1-203ENST00000359759 NUP43Q8NFH3 380 aa15.39■□□□□ 0.05
COL18A1-203ENST00000359759 FRZBQ92765 325 aa15.39■□□□□ 0.05
COL18A1-203ENST00000359759 RHBDF1Q96CC6 855 aa15.39■□□□□ 0.05
COL18A1-203ENST00000359759 F8W036 122 aa15.38■□□□□ 0.05
COL18A1-203ENST00000359759 MT-ND2P03891 347 aa15.38■□□□□ 0.05
COL18A1-203ENST00000359759 BLOC1S1P78537 153 aa15.38■□□□□ 0.05
COL18A1-203ENST00000359759 PLP2Q04941 152 aa15.38■□□□□ 0.05
COL18A1-203ENST00000359759 CLCA4Q14CN2 919 aa15.38■□□□□ 0.05
COL18A1-203ENST00000359759 SETD7Q8WTS6 366 aaKnown RBP15.38■□□□□ 0.05
COL18A1-203ENST00000359759 DEDD2Q8WXF8 326 aa15.38■□□□□ 0.05
COL18A1-203ENST00000359759 MROQ9BYG7 248 aa15.38■□□□□ 0.05
COL18A1-203ENST00000359759 KLK3P07288 261 aaPredicted RBP15.38■□□□□ 0.05
COL18A1-203ENST00000359759 ERCC1P07992 297 aaPredicted RBP15.38■□□□□ 0.05
COL18A1-203ENST00000359759 NRIP1P48552 1158 aa15.38■□□□□ 0.05
COL18A1-203ENST00000359759 GHRHRQ02643 423 aa15.38■□□□□ 0.05
COL18A1-203ENST00000359759 FAM205BPQ63HN1 556 aa15.38■□□□□ 0.05
COL18A1-203ENST00000359759 PRR18Q8N4B5 295 aa15.38■□□□□ 0.05
COL18A1-203ENST00000359759 C2CD4AQ8NCU7 369 aaPredicted RBP15.38■□□□□ 0.05
COL18A1-203ENST00000359759 LMF1Q96S06 567 aa15.38■□□□□ 0.05
COL18A1-203ENST00000359759 PTGES2Q9H7Z7 377 aa15.38■□□□□ 0.05
COL18A1-203ENST00000359759 RXFP3Q9NSD7 469 aa15.38■□□□□ 0.05
COL18A1-203ENST00000359759 PCTPQ9UKL6 214 aa15.38■□□□□ 0.05
COL18A1-203ENST00000359759 LSM5Q9Y4Y9 91 aaKnown RBP15.38■□□□□ 0.05
COL18A1-203ENST00000359759 CASC3O15234 703 aaKnown RBP15.38■□□□□ 0.05
COL18A1-203ENST00000359759 DUSP11O75319 330 aaKnown RBP15.38■□□□□ 0.05
COL18A1-203ENST00000359759 HRGP04196 525 aa15.38■□□□□ 0.05
COL18A1-203ENST00000359759 GNB3P16520 340 aa15.38■□□□□ 0.05
COL18A1-203ENST00000359759 PRKXP51817 358 aa15.38■□□□□ 0.05
COL18A1-203ENST00000359759 GRM2Q14416 872 aa15.38■□□□□ 0.05
COL18A1-203ENST00000359759 DUS1LQ6P1R4 473 aaKnown RBP15.38■□□□□ 0.05
COL18A1-203ENST00000359759 BRAT1Q6PJG6 821 aa15.38■□□□□ 0.05
COL18A1-203ENST00000359759 REM2Q8IYK8 340 aaPredicted RBP15.38■□□□□ 0.05
COL18A1-203ENST00000359759 ACBD4Q8NC06 268 aa15.38■□□□□ 0.05
COL18A1-203ENST00000359759 TWNKQ96RR1 684 aa15.38■□□□□ 0.05
COL18A1-203ENST00000359759 IL21RQ9HBE5 538 aa15.38■□□□□ 0.05
COL18A1-203ENST00000359759 MYNNQ9NPC7 610 aa15.38■□□□□ 0.05
COL18A1-203ENST00000359759 GPR83Q9NYM4 423 aa15.38■□□□□ 0.05
COL18A1-203ENST00000359759 PSAT1Q9Y617 370 aa15.38■□□□□ 0.05
COL18A1-203ENST00000359759 hCG_1807616A0A1W2PRN6 198 aa15.38■□□□□ 0.05
COL18A1-203ENST00000359759 SLC2A5P22732 501 aa15.38■□□□□ 0.05
COL18A1-203ENST00000359759 ZNF136P52737 540 aa15.38■□□□□ 0.05
COL18A1-203ENST00000359759 PPIGQ13427 754 aaKnown RBP eCLIP15.38■□□□□ 0.052e-17■■■□□ 16.2
COL18A1-203ENST00000359759 HES5Q5TA89 166 aa15.38■□□□□ 0.05
COL18A1-203ENST00000359759 TRIM46Q7Z4K8 759 aa15.38■□□□□ 0.05
COL18A1-203ENST00000359759 KIAA1191Q96A73 305 aa15.38■□□□□ 0.05
COL18A1-203ENST00000359759 NTAN1Q96AB6 310 aa15.38■□□□□ 0.05
COL18A1-203ENST00000359759 PCDHB3Q9Y5E6 796 aa15.38■□□□□ 0.05
COL18A1-203ENST00000359759 EDDM13A0A1B0GTR0 161 aa15.38■□□□□ 0.05
COL18A1-203ENST00000359759 KDELR3O43731 214 aa15.38■□□□□ 0.05
COL18A1-203ENST00000359759 WDPCPO95876 746 aa15.38■□□□□ 0.05
COL18A1-203ENST00000359759 DRD5P21918 477 aa15.38■□□□□ 0.05
COL18A1-203ENST00000359759 OXTRP30559 389 aa15.38■□□□□ 0.05
COL18A1-203ENST00000359759 HSD11B2P80365 405 aa15.38■□□□□ 0.05
COL18A1-203ENST00000359759 LRIF1Q5T3J3 769 aa15.38■□□□□ 0.05
COL18A1-203ENST00000359759 GPRC6AQ5T6X5 926 aa15.38■□□□□ 0.05
COL18A1-203ENST00000359759 SLC9B2Q86UD5 537 aa15.38■□□□□ 0.05
COL18A1-203ENST00000359759 MARVELD2Q8N4S9 558 aa15.38■□□□□ 0.05
COL18A1-203ENST00000359759 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.38■□□□□ 0.058e-7■■■□□ 17.4
COL18A1-203ENST00000359759 FAM83CQ9BQN1 747 aa15.38■□□□□ 0.05
COL18A1-203ENST00000359759 BACE2Q9Y5Z0 518 aa15.38■□□□□ 0.05
COL18A1-203ENST00000359759 C1orf196B1AJZ1 125 aa15.37■□□□□ 0.05
COL18A1-203ENST00000359759 USP2O75604 605 aaPredicted RBP15.37■□□□□ 0.05
COL18A1-203ENST00000359759 FGL1Q08830 312 aa15.37■□□□□ 0.05
COL18A1-203ENST00000359759 TRAM1Q15629 374 aa15.37■□□□□ 0.05
COL18A1-203ENST00000359759 PLEKHG7Q6ZR37 379 aa15.37■□□□□ 0.05
COL18A1-203ENST00000359759 DBF4BQ8NFT6 615 aa15.37■□□□□ 0.05
COL18A1-203ENST00000359759 OR4K14Q8NGD5 310 aa15.37■□□□□ 0.05
COL18A1-203ENST00000359759 ACDQ96AP0 544 aa15.37■□□□□ 0.05
COL18A1-203ENST00000359759 OR4K3Q96R72 315 aa15.37■□□□□ 0.05
COL18A1-203ENST00000359759 PBDC1Q9BVG4 233 aa15.37■□□□□ 0.05
COL18A1-203ENST00000359759 YIPF1Q9Y548 306 aa15.37■□□□□ 0.05
COL18A1-203ENST00000359759 IFNA4P05014 189 aa15.37■□□□□ 0.05
COL18A1-203ENST00000359759 PYCR1P32322 319 aa15.37■□□□□ 0.05
COL18A1-203ENST00000359759 ZNF84P51523 738 aa15.37■□□□□ 0.05
COL18A1-203ENST00000359759 SNTB2Q13425 540 aaKnown RBP15.37■□□□□ 0.05
COL18A1-203ENST00000359759 FAM110CQ1W6H9 321 aa15.37■□□□□ 0.05
COL18A1-203ENST00000359759 C6orf141Q5SZD1 244 aa15.37■□□□□ 0.05
COL18A1-203ENST00000359759 ENPP6Q6UWR7 440 aa15.37■□□□□ 0.05
COL18A1-203ENST00000359759 ANKRD13BQ86YJ7 626 aa15.37■□□□□ 0.05
COL18A1-203ENST00000359759 MALSU1Q96EH3 234 aa15.37■□□□□ 0.05
COL18A1-203ENST00000359759 SYNPO2LQ9H987 977 aa15.37■□□□□ 0.05
COL18A1-203ENST00000359759 PRTFDC1Q9NRG1 225 aa15.37■□□□□ 0.05
COL18A1-203ENST00000359759 IL20RAQ9UHF4 553 aa15.37■□□□□ 0.05
COL18A1-203ENST00000359759 SNAPC5O75971 98 aa15.37■□□□□ 0.05
COL18A1-203ENST00000359759 SOX30O94993 753 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms