RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 CDH2P19022 906 aaPredicted RBP8.67□□□□□ -1.02
UPF2-202ENST00000357604 IDH3AP50213 366 aa8.67□□□□□ -1.02
UPF2-202ENST00000357604 DSTNP60981 165 aa8.67□□□□□ -1.02
UPF2-202ENST00000357604 ID2Q02363 134 aa8.67□□□□□ -1.02
UPF2-202ENST00000357604 SPATS1Q496A3 300 aa8.67□□□□□ -1.02
UPF2-202ENST00000357604 TBCELQ5QJ74 424 aa8.67□□□□□ -1.02
UPF2-202ENST00000357604 RTL4Q6ZR62 310 aa8.67□□□□□ -1.02
UPF2-202ENST00000357604 ST13P4Q8IZP2 240 aaPredicted RBP8.67□□□□□ -1.02
UPF2-202ENST00000357604 CDRT4Q8N9R6 151 aa8.67□□□□□ -1.02
UPF2-202ENST00000357604 DNAJB14Q8TBM8 379 aa8.67□□□□□ -1.02
UPF2-202ENST00000357604 CCT8L2Q96SF2 557 aa8.67□□□□□ -1.02
UPF2-202ENST00000357604 MAPKAP1Q9BPZ7 522 aa8.67□□□□□ -1.02
UPF2-202ENST00000357604 ZNF160Q9HCG1 818 aa8.67□□□□□ -1.02
UPF2-202ENST00000357604 AURKCQ9UQB9 309 aa8.67□□□□□ -1.02
UPF2-202ENST00000357604 LOC105369274A0A096LPK9 316 aa8.66□□□□□ -1.02
UPF2-202ENST00000357604 LOC102723532A0A0G2JNH3 316 aa8.66□□□□□ -1.02
UPF2-202ENST00000357604 IDSB3KWA1 339 aa8.66□□□□□ -1.02
UPF2-202ENST00000357604 FANCGO15287 622 aa8.66□□□□□ -1.02
UPF2-202ENST00000357604 LCN1P31025 176 aa8.66□□□□□ -1.02
UPF2-202ENST00000357604 CYB561P49447 251 aa8.66□□□□□ -1.02
UPF2-202ENST00000357604 TLR1Q15399 786 aa8.66□□□□□ -1.02
UPF2-202ENST00000357604 LIN52Q52LA3 116 aa8.66□□□□□ -1.02
UPF2-202ENST00000357604 LACTB2Q53H82 288 aaPredicted RBP8.66□□□□□ -1.02
UPF2-202ENST00000357604 SLCO6A1Q86UG4 719 aa8.66□□□□□ -1.02
UPF2-202ENST00000357604 SNX32Q86XE0 403 aa8.66□□□□□ -1.02
UPF2-202ENST00000357604 OR4N4Q8N0Y3 316 aa8.66□□□□□ -1.02
UPF2-202ENST00000357604 MEIOBQ8N635 442 aa8.66□□□□□ -1.02
UPF2-202ENST00000357604 OR2Y1Q8NGV0 311 aa8.66□□□□□ -1.02
UPF2-202ENST00000357604 FBXO30Q8TB52 745 aa8.66□□□□□ -1.02
UPF2-202ENST00000357604 PPWD1Q96BP3 646 aaKnown RBP8.66□□□□□ -1.02
UPF2-202ENST00000357604 ENOPH1Q9UHY7 261 aa8.66□□□□□ -1.02
UPF2-202ENST00000357604 TCFL5Q9UL49 500 aa8.66□□□□□ -1.02
UPF2-202ENST00000357604 PRSS51A0A1B0GVH4 220 aa8.66□□□□□ -1.02
UPF2-202ENST00000357604 KRT33AO76009 404 aa8.66□□□□□ -1.02
UPF2-202ENST00000357604 ERGP11308 486 aa8.66□□□□□ -1.02
UPF2-202ENST00000357604 STAT5AP42229 794 aa8.66□□□□□ -1.02
UPF2-202ENST00000357604 CDC20Q12834 499 aa8.66□□□□□ -1.02
UPF2-202ENST00000357604 HYAL2Q12891 473 aa8.66□□□□□ -1.02
UPF2-202ENST00000357604 PPP1R3AQ16821 1122 aa8.66□□□□□ -1.02
UPF2-202ENST00000357604 ZCCHC12Q6PEW1 402 aa8.66□□□□□ -1.02
UPF2-202ENST00000357604 EPGNQ6UW88 154 aa8.66□□□□□ -1.02
UPF2-202ENST00000357604 SLC22A16Q86VW1 577 aa8.66□□□□□ -1.02
UPF2-202ENST00000357604 OR52B6Q8NGF0 335 aa8.66□□□□□ -1.02
UPF2-202ENST00000357604 HSPBAP1Q96EW2 488 aa8.66□□□□□ -1.02
UPF2-202ENST00000357604 ACTRT3Q9BYD9 372 aa8.66□□□□□ -1.02
UPF2-202ENST00000357604 ACSS1Q9NUB1 689 aaPredicted RBP8.66□□□□□ -1.02
UPF2-202ENST00000357604 A0A1W2PQM1 296 aa8.66□□□□□ -1.02
UPF2-202ENST00000357604 SERTM1A2A2V5 107 aa8.66□□□□□ -1.02
UPF2-202ENST00000357604 FAM227AF5H4B4 570 aa8.66□□□□□ -1.02
UPF2-202ENST00000357604 SEC24DO94855 1032 aaPredicted RBP8.66□□□□□ -1.02
UPF2-202ENST00000357604 AIFM1O95831 613 aa8.66□□□□□ -1.02
UPF2-202ENST00000357604 HOXC12P31275 282 aa8.66□□□□□ -1.02
UPF2-202ENST00000357604 CLDN8P56748 225 aa8.66□□□□□ -1.02
UPF2-202ENST00000357604 GTF2IRD2BQ6EKJ0 949 aa8.66□□□□□ -1.02
UPF2-202ENST00000357604 LETMD1Q6P1Q0 360 aa8.66□□□□□ -1.02
UPF2-202ENST00000357604 GTF2IRD2Q86UP8 949 aa8.66□□□□□ -1.02
UPF2-202ENST00000357604 TOR1AIP2Q8NFQ8 470 aa8.66□□□□□ -1.02
UPF2-202ENST00000357604 ZNF501Q96CX3 271 aaPredicted RBP8.66□□□□□ -1.02
UPF2-202ENST00000357604 ZNF717Q9BY31 904 aaPredicted RBP8.66□□□□□ -1.02
UPF2-202ENST00000357604 ATP6AP2A0A1C7CYW4 349 aa8.66□□□□□ -1.02
UPF2-202ENST00000357604 RNASET2O00584 256 aaKnown RBP8.66□□□□□ -1.02
UPF2-202ENST00000357604 ATP6AP2O75787 350 aa8.66□□□□□ -1.02
UPF2-202ENST00000357604 COX4I1P13073 169 aa8.66□□□□□ -1.02
UPF2-202ENST00000357604 CCL4P13236 92 aa8.66□□□□□ -1.02
UPF2-202ENST00000357604 PSMA4P25789 261 aaKnown RBP8.66□□□□□ -1.02
UPF2-202ENST00000357604 UGT8Q16880 541 aa8.66□□□□□ -1.02
UPF2-202ENST00000357604 KCT2Q8NC54 265 aa8.66□□□□□ -1.02
UPF2-202ENST00000357604 KCNA7Q96RP8 456 aa8.66□□□□□ -1.02
UPF2-202ENST00000357604 B3GAT2Q9NPZ5 323 aa8.66□□□□□ -1.02
UPF2-202ENST00000357604 SAR1AQ9NR31 198 aa8.66□□□□□ -1.02
UPF2-202ENST00000357604 TFPIP10646 304 aa8.65□□□□□ -1.02
UPF2-202ENST00000357604 GP1BBP13224 206 aa8.65□□□□□ -1.02
UPF2-202ENST00000357604 HOXB3P14651 431 aaPredicted RBP8.65□□□□□ -1.02
UPF2-202ENST00000357604 HNRNPH1P31943 449 aaKnown RBP8.65□□□□□ -1.02
UPF2-202ENST00000357604 GALNSP34059 522 aa8.65□□□□□ -1.02
UPF2-202ENST00000357604 ST3GAL2Q16842 350 aa8.65□□□□□ -1.02
UPF2-202ENST00000357604 TMEM207Q6UWW9 146 aa8.65□□□□□ -1.02
UPF2-202ENST00000357604 RGS9BPQ6ZS82 235 aa8.65□□□□□ -1.02
UPF2-202ENST00000357604 ZNF550Q7Z398 422 aa8.65□□□□□ -1.02
UPF2-202ENST00000357604 DIO2Q92813 273 aa8.65□□□□□ -1.02
UPF2-202ENST00000357604 BTNL2Q9UIR0 455 aa8.65□□□□□ -1.02
UPF2-202ENST00000357604 SAGE2PA6NJ88 616 aa8.65□□□□□ -1.02
UPF2-202ENST00000357604 EML2O95834 649 aa8.65□□□□□ -1.02
UPF2-202ENST00000357604 EIF2S3P41091 472 aaKnown RBP8.65□□□□□ -1.02
UPF2-202ENST00000357604 TERF2Q15554 542 aa8.65□□□□□ -1.02
UPF2-202ENST00000357604 SGCBQ16585 318 aa8.65□□□□□ -1.02
UPF2-202ENST00000357604 C17orf82Q86X59 251 aaPredicted RBP8.65□□□□□ -1.02
UPF2-202ENST00000357604 CCDC116Q8IYX3 515 aa8.65□□□□□ -1.02
UPF2-202ENST00000357604 SLC34A3Q8N130 599 aa8.65□□□□□ -1.02
UPF2-202ENST00000357604 POGLUT1Q8NBL1 392 aa8.65□□□□□ -1.02
UPF2-202ENST00000357604 C11orf65Q8NCR3 313 aa8.65□□□□□ -1.02
UPF2-202ENST00000357604 XAGE5Q8WWM1 108 aa8.65□□□□□ -1.02
UPF2-202ENST00000357604 CCDC124Q96CT7 223 aaKnown RBP8.65□□□□□ -1.02
UPF2-202ENST00000357604 EPYCQ99645 322 aa8.65□□□□□ -1.02
UPF2-202ENST00000357604 CAAP1Q9H8G2 361 aa8.65□□□□□ -1.02
UPF2-202ENST00000357604 ERICH4A6NGS2 130 aa8.65□□□□□ -1.03
UPF2-202ENST00000357604 TSPAN12O95859 305 aa8.65□□□□□ -1.03
UPF2-202ENST00000357604 C6orf47O95873 294 aa8.65□□□□□ -1.03
UPF2-202ENST00000357604 FCGR1AP12314 374 aa8.65□□□□□ -1.03
UPF2-202ENST00000357604 ABOP16442 354 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms