RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 C6orf120Q7Z4R8 191 aa11.25□□□□□ -0.61
COL9A1-202ENST00000357250 ZBTB8BQ8NAP8 495 aaPredicted RBP11.25□□□□□ -0.61
COL9A1-202ENST00000357250 NEIL3Q8TAT5 605 aa11.25□□□□□ -0.61
COL9A1-202ENST00000357250 SMPDL3BQ92485 455 aa11.25□□□□□ -0.61
COL9A1-202ENST00000357250 LGALS12Q96DT0 336 aa11.25□□□□□ -0.61
COL9A1-202ENST00000357250 NEDD4LQ96PU5 975 aa11.25□□□□□ -0.61
COL9A1-202ENST00000357250 CCDC32Q9BV29 185 aa11.25□□□□□ -0.61
COL9A1-202ENST00000357250 BRF2Q9HAW0 419 aa11.25□□□□□ -0.61
COL9A1-202ENST00000357250 RDH14Q9HBH5 336 aa11.25□□□□□ -0.61
COL9A1-202ENST00000357250 ZNF69Q9UC07 566 aa11.25□□□□□ -0.61
COL9A1-202ENST00000357250 SIPA1L3O60292 1781 aaPredicted RBP11.25□□□□□ -0.61
COL9A1-202ENST00000357250 A0A0G2JPF8 293 aa11.25□□□□□ -0.61
COL9A1-202ENST00000357250 HNRNPCL3B7ZW38 293 aa11.25□□□□□ -0.61
COL9A1-202ENST00000357250 G3V2L1 256 aa11.25□□□□□ -0.61
COL9A1-202ENST00000357250 PET100P0DJ07 73 aa11.25□□□□□ -0.61
COL9A1-202ENST00000357250 HNRNPCL4P0DMR1 293 aa11.25□□□□□ -0.61
COL9A1-202ENST00000357250 OC90Q02509 493 aaPredicted RBP11.25□□□□□ -0.61
COL9A1-202ENST00000357250 VEZF1Q14119 521 aa11.25□□□□□ -0.61
COL9A1-202ENST00000357250 PON2Q15165 354 aa11.25□□□□□ -0.61
COL9A1-202ENST00000357250 EXOC3L2Q2M3D2 409 aa11.25□□□□□ -0.61
COL9A1-202ENST00000357250 GRHL2Q6ISB3 625 aa11.25□□□□□ -0.61
COL9A1-202ENST00000357250 UBE2Q1Q7Z7E8 422 aa11.25□□□□□ -0.61
COL9A1-202ENST00000357250 AIFM2Q9BRQ8 373 aa11.25□□□□□ -0.61
COL9A1-202ENST00000357250 PITHD1Q9GZP4 211 aaPredicted RBP11.25□□□□□ -0.61
COL9A1-202ENST00000357250 METTL7AQ9H8H3 244 aa11.25□□□□□ -0.61
COL9A1-202ENST00000357250 MARF1Q9Y4F3 1742 aaKnown RBP11.25□□□□□ -0.61
COL9A1-202ENST00000357250 LSM1O15116 133 aaKnown RBP11.24□□□□□ -0.61
COL9A1-202ENST00000357250 MUSKO15146 869 aa11.24□□□□□ -0.61
COL9A1-202ENST00000357250 PLGP00747 810 aaPredicted RBP11.24□□□□□ -0.61
COL9A1-202ENST00000357250 ERCC1P07992 297 aaPredicted RBP11.24□□□□□ -0.61
COL9A1-202ENST00000357250 OR12D1P0DN82 309 aa11.24□□□□□ -0.61
COL9A1-202ENST00000357250 CDKN1CP49918 316 aaPredicted RBP11.24□□□□□ -0.61
COL9A1-202ENST00000357250 E2F1Q01094 437 aa11.24□□□□□ -0.61
COL9A1-202ENST00000357250 CATSPEREQ5SY80 951 aa11.24□□□□□ -0.61
COL9A1-202ENST00000357250 CES4AQ5XG92 561 aa11.24□□□□□ -0.61
COL9A1-202ENST00000357250 PRSS48Q7RTY5 328 aa11.24□□□□□ -0.61
COL9A1-202ENST00000357250 LRRTM3Q86VH5 581 aa11.24□□□□□ -0.61
COL9A1-202ENST00000357250 TIGD4Q8IY51 512 aa11.24□□□□□ -0.61
COL9A1-202ENST00000357250 HS3ST5Q8IZT8 346 aa11.24□□□□□ -0.61
COL9A1-202ENST00000357250 NPWQ8N729 165 aa11.24□□□□□ -0.61
COL9A1-202ENST00000357250 C3orf58Q8NDZ4 430 aa11.24□□□□□ -0.61
COL9A1-202ENST00000357250 ZNF431Q8TF32 576 aaPredicted RBP11.24□□□□□ -0.61
COL9A1-202ENST00000357250 DAZLQ92904 295 aaKnown RBP11.24□□□□□ -0.61
COL9A1-202ENST00000357250 DHRS4Q9BTZ2 278 aa11.24□□□□□ -0.61
COL9A1-202ENST00000357250 METTL8Q9H825 291 aaKnown RBP11.24□□□□□ -0.61
COL9A1-202ENST00000357250 SEC61A2Q9H9S3 476 aa11.24□□□□□ -0.61
COL9A1-202ENST00000357250 HCSTQ9UBK5 93 aa11.24□□□□□ -0.61
COL9A1-202ENST00000357250 A8MUA0 341 aa11.24□□□□□ -0.61
COL9A1-202ENST00000357250 BLOC1S5-TXNDC5H3BN57 136 aa11.24□□□□□ -0.61
COL9A1-202ENST00000357250 GBAP04062 536 aa11.24□□□□□ -0.61
COL9A1-202ENST00000357250 C8orf89P0DMQ9 161 aa11.24□□□□□ -0.61
COL9A1-202ENST00000357250 ANXA3P12429 323 aa11.24□□□□□ -0.61
COL9A1-202ENST00000357250 CELP19835 753 aa11.24□□□□□ -0.61
COL9A1-202ENST00000357250 ENTPD1P49961 510 aa11.24□□□□□ -0.61
COL9A1-202ENST00000357250 ARSDP51689 593 aa11.24□□□□□ -0.61
COL9A1-202ENST00000357250 GNG2P59768 71 aa11.24□□□□□ -0.61
COL9A1-202ENST00000357250 HNRNPA0Q13151 305 aaKnown RBP11.24□□□□□ -0.61
COL9A1-202ENST00000357250 ZNF267Q14586 743 aaPredicted RBP11.24□□□□□ -0.61
COL9A1-202ENST00000357250 HSD17B12Q53GQ0 312 aa11.24□□□□□ -0.61
COL9A1-202ENST00000357250 SLC25A25Q6KCM7 469 aa11.24□□□□□ -0.61
COL9A1-202ENST00000357250 RTL10Q7L3V2 364 aa11.24□□□□□ -0.61
COL9A1-202ENST00000357250 RASGRP3Q8IV61 690 aa11.24□□□□□ -0.61
COL9A1-202ENST00000357250 KRTCAP2Q8N6L1 136 aa11.24□□□□□ -0.61
COL9A1-202ENST00000357250 SETD6Q8TBK2 473 aa11.24□□□□□ -0.61
COL9A1-202ENST00000357250 FCAMRQ8WWV6 532 aa11.24□□□□□ -0.61
COL9A1-202ENST00000357250 SGCDQ92629 289 aa11.24□□□□□ -0.61
COL9A1-202ENST00000357250 COL4A1P02462 1669 aa11.24□□□□□ -0.61
COL9A1-202ENST00000357250 C4AP0C0L4 1744 aa11.24□□□□□ -0.61
COL9A1-202ENST00000357250 H3BUI4 141 aa11.24□□□□□ -0.61
COL9A1-202ENST00000357250 JRKO75564 520 aa11.24□□□□□ -0.61
COL9A1-202ENST00000357250 CSTAP01040 98 aa11.24□□□□□ -0.61
COL9A1-202ENST00000357250 CSF2RAP15509 400 aa11.24□□□□□ -0.61
COL9A1-202ENST00000357250 NDUFV2P19404 249 aa11.24□□□□□ -0.61
COL9A1-202ENST00000357250 ELK4P28324 431 aa11.24□□□□□ -0.61
COL9A1-202ENST00000357250 OXTRP30559 389 aa11.24□□□□□ -0.61
COL9A1-202ENST00000357250 LCN1P31025 176 aa11.24□□□□□ -0.61
COL9A1-202ENST00000357250 DPP6P42658 865 aa11.24□□□□□ -0.61
COL9A1-202ENST00000357250 DUSP3P51452 185 aaPredicted RBP11.24□□□□□ -0.61
COL9A1-202ENST00000357250 OR4D2P58180 307 aa11.24□□□□□ -0.61
COL9A1-202ENST00000357250 GRM2Q14416 872 aa11.24□□□□□ -0.61
COL9A1-202ENST00000357250 OR4D1Q15615 310 aa11.24□□□□□ -0.61
COL9A1-202ENST00000357250 GALNT12Q8IXK2 581 aa11.24□□□□□ -0.61
COL9A1-202ENST00000357250 CCDC116Q8IYX3 515 aa11.24□□□□□ -0.61
COL9A1-202ENST00000357250 ACBD7Q8N6N7 88 aa11.24□□□□□ -0.61
COL9A1-202ENST00000357250 OR51G2Q8NGK0 314 aa11.24□□□□□ -0.61
COL9A1-202ENST00000357250 ZNF778Q96MU6 729 aa11.24□□□□□ -0.61
COL9A1-202ENST00000357250 BARD1Q99728 777 aaKnown RBP11.24□□□□□ -0.61
COL9A1-202ENST00000357250 WACQ9BTA9 647 aa11.24□□□□□ -0.61
COL9A1-202ENST00000357250 ZNF717Q9BY31 904 aaPredicted RBP11.24□□□□□ -0.61
COL9A1-202ENST00000357250 POTEKPQ9BYX7 375 aa11.24□□□□□ -0.61
COL9A1-202ENST00000357250 ANKRD60Q9BZ19 345 aa11.24□□□□□ -0.61
COL9A1-202ENST00000357250 EVA1AQ9H8M9 152 aa11.24□□□□□ -0.61
COL9A1-202ENST00000357250 GXYLT2A0PJZ3 443 aa11.24□□□□□ -0.61
COL9A1-202ENST00000357250 GKN3PP0CG01 181 aa11.24□□□□□ -0.61
COL9A1-202ENST00000357250 SH3BP2P78314 561 aa11.24□□□□□ -0.61
COL9A1-202ENST00000357250 PRKCDQ05655 676 aa11.24□□□□□ -0.61
COL9A1-202ENST00000357250 CBFBQ13951 182 aa11.24□□□□□ -0.61
COL9A1-202ENST00000357250 ANKRD26P1Q6NSI1 321 aa11.24□□□□□ -0.61
COL9A1-202ENST00000357250 MFSD2AQ8NA29 543 aa11.24□□□□□ -0.61
COL9A1-202ENST00000357250 SPERTQ8NA61 448 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms