RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 GATA6Q92908 595 aa14.23□□□□□ -0.13
CHD4-201ENST00000357008 RTP4Q96DX8 246 aa14.23□□□□□ -0.13
CHD4-201ENST00000357008 SLC5A7Q9GZV3 580 aa14.23□□□□□ -0.13
CHD4-201ENST00000357008 H3BMQ9 156 aa14.23□□□□□ -0.13
CHD4-201ENST00000357008 EMC8O43402 210 aa14.23□□□□□ -0.13
CHD4-201ENST00000357008 RNF13O43567 381 aa14.23□□□□□ -0.13
CHD4-201ENST00000357008 DHRS4L1P0CG22 281 aa14.23□□□□□ -0.13
CHD4-201ENST00000357008 CCDC58Q4VC31 144 aa14.23□□□□□ -0.13
CHD4-201ENST00000357008 MS4A15Q8N5U1 240 aa14.23□□□□□ -0.13
CHD4-201ENST00000357008 COG8Q96MW5 612 aa14.23□□□□□ -0.13
CHD4-201ENST00000357008 MCCC2Q9HCC0 563 aa14.23□□□□□ -0.13
CHD4-201ENST00000357008 SOX1O00570 391 aaPredicted RBP14.22□□□□□ -0.13
CHD4-201ENST00000357008 FHP07954 510 aa14.22□□□□□ -0.13
CHD4-201ENST00000357008 T-ENOLP0DO92 83 aa14.22□□□□□ -0.13
CHD4-201ENST00000357008 C15orf39Q6ZRI6 1047 aa14.22□□□□□ -0.13
CHD4-201ENST00000357008 VTCN1Q7Z7D3 282 aa14.22□□□□□ -0.13
CHD4-201ENST00000357008 OR5T2Q8NGG2 359 aa14.22□□□□□ -0.13
CHD4-201ENST00000357008 ZNF461Q8TAF7 563 aa14.22□□□□□ -0.13
CHD4-201ENST00000357008 ACSL6Q9UKU0 697 aa14.22□□□□□ -0.13
CHD4-201ENST00000357008 HYAL2Q12891 473 aa14.22□□□□□ -0.13
CHD4-201ENST00000357008 OR4D1Q15615 310 aa14.22□□□□□ -0.13
CHD4-201ENST00000357008 C1orf220Q5T0J3 134 aa14.22□□□□□ -0.13
CHD4-201ENST00000357008 CYP4V2Q6ZWL3 525 aaPredicted RBP14.22□□□□□ -0.13
CHD4-201ENST00000357008 SSX6Q7RTT6 188 aa14.22□□□□□ -0.13
CHD4-201ENST00000357008 PDZD9Q8IXQ8 264 aa14.22□□□□□ -0.13
CHD4-201ENST00000357008 NLKQ9UBE8 527 aa14.22□□□□□ -0.13
CHD4-201ENST00000357008 MUSKO15146 869 aa14.22□□□□□ -0.13
CHD4-201ENST00000357008 IFNA2P01563 188 aa14.22□□□□□ -0.13
CHD4-201ENST00000357008 PTNP21246 168 aa14.22□□□□□ -0.13
CHD4-201ENST00000357008 PITX1P78337 314 aaPredicted RBP14.22□□□□□ -0.13
CHD4-201ENST00000357008 MS4A2Q01362 244 aa14.22□□□□□ -0.13
CHD4-201ENST00000357008 UAP1L1Q3KQV9 507 aa14.22□□□□□ -0.13
CHD4-201ENST00000357008 ZNF776Q68DI1 518 aaPredicted RBP14.22□□□□□ -0.13
CHD4-201ENST00000357008 TMPRSS12Q86WS5 348 aa14.22□□□□□ -0.13
CHD4-201ENST00000357008 NUP43Q8NFH3 380 aa14.22□□□□□ -0.13
CHD4-201ENST00000357008 SCLYQ96I15 445 aa14.22□□□□□ -0.13
CHD4-201ENST00000357008 C7orf34Q96L11 122 aa14.22□□□□□ -0.13
CHD4-201ENST00000357008 HS6ST2Q96MM7 605 aa14.22□□□□□ -0.13
CHD4-201ENST00000357008 NDUFV2P19404 249 aa14.22□□□□□ -0.13
CHD4-201ENST00000357008 C6orf120Q7Z4R8 191 aa14.22□□□□□ -0.13
CHD4-201ENST00000357008 OR52B6Q8NGF0 335 aa14.22□□□□□ -0.13
CHD4-201ENST00000357008 OR51A7Q8NH64 312 aa14.22□□□□□ -0.13
CHD4-201ENST00000357008 MROQ9BYG7 248 aa14.22□□□□□ -0.13
CHD4-201ENST00000357008 PCDH10Q9P2E7 1040 aa14.22□□□□□ -0.13
CHD4-201ENST00000357008 TRBV2A0A0J9YWF9 115 aa14.22□□□□□ -0.13
CHD4-201ENST00000357008 G3V2L1 256 aa14.22□□□□□ -0.13
CHD4-201ENST00000357008 TNFRSF10BO14763 440 aa14.22□□□□□ -0.13
CHD4-201ENST00000357008 HSPA12AO43301 675 aa14.22□□□□□ -0.13
CHD4-201ENST00000357008 SPARCP09486 303 aa14.22□□□□□ -0.13
CHD4-201ENST00000357008 CFL1P23528 166 aaKnown RBP14.22□□□□□ -0.13
CHD4-201ENST00000357008 SPRED3Q2MJR0 410 aa14.22□□□□□ -0.13
CHD4-201ENST00000357008 BEST3Q8N1M1 668 aa14.22□□□□□ -0.13
CHD4-201ENST00000357008 OR4C15Q8NGM1 316 aa14.22□□□□□ -0.13
CHD4-201ENST00000357008 RGCCQ9H4X1 137 aa14.22□□□□□ -0.13
CHD4-201ENST00000357008 TSPAN6O43657 245 aa14.22□□□□□ -0.13
CHD4-201ENST00000357008 F2P00734 622 aa14.22□□□□□ -0.13
CHD4-201ENST00000357008 OXTRP30559 389 aa14.22□□□□□ -0.13
CHD4-201ENST00000357008 SHMT2P34897 504 aa14.22□□□□□ -0.13
CHD4-201ENST00000357008 SYNPOQ8N3V7 929 aa14.22□□□□□ -0.13
CHD4-201ENST00000357008 KDM1BQ8NB78 822 aa14.22□□□□□ -0.13
CHD4-201ENST00000357008 CHDHQ8NE62 594 aaPredicted RBP14.22□□□□□ -0.13
CHD4-201ENST00000357008 MFSD8Q8NHS3 518 aa14.22□□□□□ -0.13
CHD4-201ENST00000357008 NEDD4LQ96PU5 975 aa14.22□□□□□ -0.13
CHD4-201ENST00000357008 KATNBL1Q9H079 304 aa14.22□□□□□ -0.13
CHD4-201ENST00000357008 ACOT13Q9NPJ3 140 aa14.22□□□□□ -0.13
CHD4-201ENST00000357008 FBXL12Q9NXK8 326 aa14.22□□□□□ -0.13
CHD4-201ENST00000357008 SOX30O94993 753 aa14.21□□□□□ -0.13
CHD4-201ENST00000357008 RAB5BP61020 215 aa14.21□□□□□ -0.13
CHD4-201ENST00000357008 CCL14Q16627 93 aa14.21□□□□□ -0.13
CHD4-201ENST00000357008 UGT3A2Q3SY77 523 aa14.21□□□□□ -0.13
CHD4-201ENST00000357008 RAB11FIP2Q7L804 512 aa14.21□□□□□ -0.13
CHD4-201ENST00000357008 TRAM1L1Q8N609 369 aa14.21□□□□□ -0.13
CHD4-201ENST00000357008 PAPD5Q8NDF8 572 aaKnown RBP14.21□□□□□ -0.13
CHD4-201ENST00000357008 AUTS2Q8WXX7 1259 aa14.21□□□□□ -0.13
CHD4-201ENST00000357008 TMIGD2Q96BF3 282 aa14.21□□□□□ -0.13
CHD4-201ENST00000357008 HDHD5Q9BXW7 423 aa14.21□□□□□ -0.13
CHD4-201ENST00000357008 TMEM45AQ9NWC5 275 aa14.21□□□□□ -0.13
CHD4-201ENST00000357008 MAFFQ9ULX9 164 aa14.21□□□□□ -0.13
CHD4-201ENST00000357008 A0A1W2PPK0 400 aa14.21□□□□□ -0.13
CHD4-201ENST00000357008 SMCO3A2RU48 225 aa14.21□□□□□ -0.13
CHD4-201ENST00000357008 SFTPBP07988 381 aa14.21□□□□□ -0.13
CHD4-201ENST00000357008 HRH2P25021 359 aa14.21□□□□□ -0.13
CHD4-201ENST00000357008 GKP32189 559 aa14.21□□□□□ -0.13
CHD4-201ENST00000357008 RELAQ04206 551 aa14.21□□□□□ -0.13
CHD4-201ENST00000357008 DOC2AQ14183 400 aa14.21□□□□□ -0.13
CHD4-201ENST00000357008 PROX2Q3B8N5 592 aa14.21□□□□□ -0.13
CHD4-201ENST00000357008 PSAPL1Q6NUJ1 521 aa14.21□□□□□ -0.13
CHD4-201ENST00000357008 TEX26Q8N6G2 289 aa14.21□□□□□ -0.13
CHD4-201ENST00000357008 GALNT11Q8NCW6 608 aa14.21□□□□□ -0.13
CHD4-201ENST00000357008 JPH3Q8WXH2 748 aaPredicted RBP14.21□□□□□ -0.13
CHD4-201ENST00000357008 GLYATL1Q969I3 302 aa14.21□□□□□ -0.13
CHD4-201ENST00000357008 G6PC3Q9BUM1 346 aa14.21□□□□□ -0.13
CHD4-201ENST00000357008 NPLQ9BXD5 320 aaPredicted RBP14.21□□□□□ -0.13
CHD4-201ENST00000357008 DHDHQ9UQ10 334 aa14.21□□□□□ -0.13
CHD4-201ENST00000357008 GPR89AB7ZAQ6 455 aa14.21□□□□□ -0.13
CHD4-201ENST00000357008 H7C417 338 aa14.21□□□□□ -0.13
CHD4-201ENST00000357008 BCAS1O75363 584 aaPredicted RBP14.21□□□□□ -0.13
CHD4-201ENST00000357008 PLGP00747 810 aaPredicted RBP14.21□□□□□ -0.13
CHD4-201ENST00000357008 RETP07949 1114 aa14.21□□□□□ -0.13
CHD4-201ENST00000357008 GPR89BP0CG08 455 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms