RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 ABATP80404 500 aa21.1■□□□□ 0.97
NKX2-1-201ENST00000354822 TP53BP2Q13625 1128 aa21.1■□□□□ 0.97
NKX2-1-201ENST00000354822 TCTN3Q6NUS6 607 aa21.1■□□□□ 0.97
NKX2-1-201ENST00000354822 FAM46DQ8NEK8 389 aa21.1■□□□□ 0.97
NKX2-1-201ENST00000354822 SLIRPQ9GZT3 109 aaKnown RBP21.1■□□□□ 0.97
NKX2-1-201ENST00000354822 IGFLR1Q9H665 355 aa21.1■□□□□ 0.97
NKX2-1-201ENST00000354822 MVB12BQ9H7P6 319 aa21.1■□□□□ 0.97
NKX2-1-201ENST00000354822 IMP3Q9NV31 184 aaKnown RBP21.1■□□□□ 0.97
NKX2-1-201ENST00000354822 SELENONQ9NZV5 590 aa21.1■□□□□ 0.97
NKX2-1-201ENST00000354822 SEC14L3Q9UDX4 400 aa21.1■□□□□ 0.97
NKX2-1-201ENST00000354822 PMF1-BGLAPU3KQ54 211 aa21.1■□□□□ 0.97
NKX2-1-201ENST00000354822 DSPPQ9NZW4 1301 aa21.1■□□□□ 0.97
NKX2-1-201ENST00000354822 A0A1W2PP55 124 aa21.09■□□□□ 0.97
NKX2-1-201ENST00000354822 FAAHO00519 579 aa21.09■□□□□ 0.97
NKX2-1-201ENST00000354822 SERPIND1P05546 499 aa21.09■□□□□ 0.97
NKX2-1-201ENST00000354822 OSMP13725 252 aa21.09■□□□□ 0.97
NKX2-1-201ENST00000354822 PPP2R1BP30154 601 aa21.09■□□□□ 0.97
NKX2-1-201ENST00000354822 PKLRP30613 574 aa21.09■□□□□ 0.97
NKX2-1-201ENST00000354822 ANXA11P50995 505 aaKnown RBP21.09■□□□□ 0.97
NKX2-1-201ENST00000354822 ILKQ13418 452 aa21.09■□□□□ 0.97
NKX2-1-201ENST00000354822 IRF3Q14653 427 aa21.09■□□□□ 0.97
NKX2-1-201ENST00000354822 SLC9A5Q14940 896 aa21.09■□□□□ 0.97
NKX2-1-201ENST00000354822 NDUFAF5Q5TEU4 345 aa21.09■□□□□ 0.97
NKX2-1-201ENST00000354822 PTCHD4Q6ZW05 846 aa21.09■□□□□ 0.97
NKX2-1-201ENST00000354822 SLC46A3Q7Z3Q1 461 aa21.09■□□□□ 0.97
NKX2-1-201ENST00000354822 CACUL1Q86Y37 369 aa21.09■□□□□ 0.97
NKX2-1-201ENST00000354822 KRT73Q86Y46 540 aa21.09■□□□□ 0.97
NKX2-1-201ENST00000354822 TBC1D19Q8N5T2 526 aa21.09■□□□□ 0.97
NKX2-1-201ENST00000354822 RPL3LQ92901 407 aaKnown RBP21.09■□□□□ 0.97
NKX2-1-201ENST00000354822 C1QTNF2Q9BXJ5 285 aa21.09■□□□□ 0.97
NKX2-1-201ENST00000354822 UCK2Q9BZX2 261 aa21.09■□□□□ 0.97
NKX2-1-201ENST00000354822 BTBD1Q9H0C5 482 aa21.09■□□□□ 0.97
NKX2-1-201ENST00000354822 DCSTAMPQ9H295 470 aa21.09■□□□□ 0.97
NKX2-1-201ENST00000354822 SLC35C2Q9NQQ7 365 aa21.09■□□□□ 0.97
NKX2-1-201ENST00000354822 ZFR2Q9UPR6 939 aaKnown RBP21.09■□□□□ 0.97
NKX2-1-201ENST00000354822 PLXND1Q9Y4D7 1925 aa21.09■□□□□ 0.97
NKX2-1-201ENST00000354822 SLC28A2O43868 658 aa21.09■□□□□ 0.97
NKX2-1-201ENST00000354822 FUCA1P04066 466 aa21.09■□□□□ 0.97
NKX2-1-201ENST00000354822 H1F0P07305 194 aaKnown RBP21.09■□□□□ 0.97
NKX2-1-201ENST00000354822 GPC1P35052 558 aa21.09■□□□□ 0.97
NKX2-1-201ENST00000354822 NUDT6P53370 316 aa21.09■□□□□ 0.97
NKX2-1-201ENST00000354822 ATP1A4Q13733 1029 aa21.09■□□□□ 0.97
NKX2-1-201ENST00000354822 MAPK11Q15759 364 aa21.09■□□□□ 0.97
NKX2-1-201ENST00000354822 ZIC1Q15915 447 aa21.09■□□□□ 0.97
NKX2-1-201ENST00000354822 USP43Q70EL4 1123 aa21.09■□□□□ 0.97
NKX2-1-201ENST00000354822 B3GNT7Q8NFL0 401 aa21.09■□□□□ 0.97
NKX2-1-201ENST00000354822 SLC35G5Q96KT7 338 aa21.09■□□□□ 0.97
NKX2-1-201ENST00000354822 AMDHD1Q96NU7 426 aa21.09■□□□□ 0.97
NKX2-1-201ENST00000354822 SPATA5L1Q9BVQ7 753 aa21.09■□□□□ 0.97
NKX2-1-201ENST00000354822 CDCA4Q9BXL8 241 aa21.09■□□□□ 0.97
NKX2-1-201ENST00000354822 MRPS30Q9NP92 439 aaKnown RBP21.09■□□□□ 0.97
NKX2-1-201ENST00000354822 LMCD1Q9NZU5 365 aa21.09■□□□□ 0.97
NKX2-1-201ENST00000354822 SERGEFQ9UGK8 458 aa21.09■□□□□ 0.97
NKX2-1-201ENST00000354822 SLC17A4Q9Y2C5 497 aa21.09■□□□□ 0.97
NKX2-1-201ENST00000354822 IGKV1-8A0A0C4DH67 115 aa21.08■□□□□ 0.97
NKX2-1-201ENST00000354822 TRBV4-1A0A0J9YWV2 114 aa21.08■□□□□ 0.97
NKX2-1-201ENST00000354822 ANHXE9PGG2 379 aa21.08■□□□□ 0.97
NKX2-1-201ENST00000354822 RPLP0P05388 317 aaKnown RBP21.08■□□□□ 0.97
NKX2-1-201ENST00000354822 FGL2Q14314 439 aa21.08■□□□□ 0.97
NKX2-1-201ENST00000354822 INAQ16352 499 aa21.08■□□□□ 0.97
NKX2-1-201ENST00000354822 ZNF776Q68DI1 518 aaPredicted RBP21.08■□□□□ 0.97
NKX2-1-201ENST00000354822 NIPAL1Q6NVV3 410 aa21.08■□□□□ 0.97
NKX2-1-201ENST00000354822 BHLHB9Q6PI77 547 aa21.08■□□□□ 0.97
NKX2-1-201ENST00000354822 ZNF513Q8N8E2 541 aaPredicted RBP21.08■□□□□ 0.97
NKX2-1-201ENST00000354822 MINDY2Q8NBR6 621 aa21.08■□□□□ 0.97
NKX2-1-201ENST00000354822 CHFRQ96EP1 664 aa21.08■□□□□ 0.97
NKX2-1-201ENST00000354822 Q96MT0 163 aa21.08■□□□□ 0.97
NKX2-1-201ENST00000354822 TREX2Q9BQ50 279 aaPredicted RBP21.08■□□□□ 0.97
NKX2-1-201ENST00000354822 C17orf62Q9BQA9 187 aa21.08■□□□□ 0.97
NKX2-1-201ENST00000354822 C1QTNF7Q9BXJ2 289 aa21.08■□□□□ 0.97
NKX2-1-201ENST00000354822 MMP27Q9H306 513 aa21.08■□□□□ 0.97
NKX2-1-201ENST00000354822 GLIPR2Q9H4G4 154 aa21.08■□□□□ 0.97
NKX2-1-201ENST00000354822 ACAD8Q9UKU7 415 aa21.08■□□□□ 0.97
NKX2-1-201ENST00000354822 CHD7Q9P2D1 2997 aa21.08■□□□□ 0.96
NKX2-1-201ENST00000354822 KDM1AO60341 852 aa21.07■□□□□ 0.96
NKX2-1-201ENST00000354822 ADORA3P0DMS8 318 aa21.07■□□□□ 0.96
NKX2-1-201ENST00000354822 ELAVL4P26378 380 aaKnown RBP21.07■□□□□ 0.96
NKX2-1-201ENST00000354822 NTSP30990 170 aa21.07■□□□□ 0.96
NKX2-1-201ENST00000354822 GNA13Q14344 377 aa21.07■□□□□ 0.96
NKX2-1-201ENST00000354822 TMEM64Q6YI46 380 aa21.07■□□□□ 0.96
NKX2-1-201ENST00000354822 SNRNP27Q8WVK2 155 aaKnown RBP21.07■□□□□ 0.96
NKX2-1-201ENST00000354822 NKX2-4Q9H2Z4 354 aa21.07■□□□□ 0.96
NKX2-1-201ENST00000354822 SEMA3GQ9NS98 782 aa21.07■□□□□ 0.96
NKX2-1-201ENST00000354822 GPC6Q9Y625 555 aaPredicted RBP21.07■□□□□ 0.96
NKX2-1-201ENST00000354822 A3GALT2U3KPV4 340 aa21.07■□□□□ 0.96
NKX2-1-201ENST00000354822 CEACAM5P06731 702 aa21.07■□□□□ 0.96
NKX2-1-201ENST00000354822 OR12D1P0DN82 309 aa21.07■□□□□ 0.96
NKX2-1-201ENST00000354822 CNR2P34972 360 aa21.07■□□□□ 0.96
NKX2-1-201ENST00000354822 AHRP35869 848 aa21.07■□□□□ 0.96
NKX2-1-201ENST00000354822 TBC1D25Q3MII6 688 aa21.07■□□□□ 0.96
NKX2-1-201ENST00000354822 C2orf27AQ580R0 203 aa21.07■□□□□ 0.96
NKX2-1-201ENST00000354822 TMEM236Q5W0B7 351 aa21.07■□□□□ 0.96
NKX2-1-201ENST00000354822 ZNF367Q7RTV3 350 aa21.07■□□□□ 0.96
NKX2-1-201ENST00000354822 MFSD4AQ8N468 514 aa21.07■□□□□ 0.96
NKX2-1-201ENST00000354822 AMER3Q8N944 861 aa21.07■□□□□ 0.96
NKX2-1-201ENST00000354822 BBS4Q96RK4 519 aa21.07■□□□□ 0.96
NKX2-1-201ENST00000354822 MROQ9BYG7 248 aa21.07■□□□□ 0.96
NKX2-1-201ENST00000354822 ALOXE3Q9BYJ1 711 aa21.07■□□□□ 0.96
NKX2-1-201ENST00000354822 PLA2G2FQ9BZM2 168 aa21.07■□□□□ 0.96
NKX2-1-201ENST00000354822 OR51I1Q9H343 314 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms