RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 SAP30O75446 220 aa1.46□□□□□ -2.17
BRCA1-202ENST00000354071 PAPSS2O95340 614 aaPredicted RBP1.46□□□□□ -2.17
BRCA1-202ENST00000354071 OPN1MWP04001 364 aa1.46□□□□□ -2.17
BRCA1-202ENST00000354071 NR3C1P04150 777 aa1.46□□□□□ -2.17
BRCA1-202ENST00000354071 MMP10P09238 476 aa1.46□□□□□ -2.17
BRCA1-202ENST00000354071 OPN1MW2P0DN77 364 aa1.46□□□□□ -2.17
BRCA1-202ENST00000354071 OPN1MW3P0DN78 364 aa1.46□□□□□ -2.17
BRCA1-202ENST00000354071 RRASP10301 218 aa1.46□□□□□ -2.17
BRCA1-202ENST00000354071 CPN1P15169 458 aa1.46□□□□□ -2.17
BRCA1-202ENST00000354071 MTIF2P46199 727 aaKnown RBP1.46□□□□□ -2.17
BRCA1-202ENST00000354071 OR1G1P47890 313 aa1.46□□□□□ -2.17
BRCA1-202ENST00000354071 NPY2RP49146 381 aa1.46□□□□□ -2.17
BRCA1-202ENST00000354071 RAD23BP54727 409 aa1.46□□□□□ -2.17
BRCA1-202ENST00000354071 BACE1P56817 501 aa1.46□□□□□ -2.17
BRCA1-202ENST00000354071 MYBPC1Q00872 1141 aa1.46□□□□□ -2.17
BRCA1-202ENST00000354071 ENPEPQ07075 957 aa1.46□□□□□ -2.17
BRCA1-202ENST00000354071 DLG1Q12959 904 aa1.46□□□□□ -2.17
BRCA1-202ENST00000354071 DMP1Q13316 513 aaPredicted RBP1.46□□□□□ -2.17
BRCA1-202ENST00000354071 ZNF699Q32M78 642 aa1.46□□□□□ -2.17
BRCA1-202ENST00000354071 CDC42EP5Q6NZY7 148 aa1.46□□□□□ -2.17
BRCA1-202ENST00000354071 CLEC2AQ6UVW9 174 aa1.46□□□□□ -2.17
BRCA1-202ENST00000354071 LIN28BQ6ZN17 250 aaKnown RBP eCLIP1.46□□□□□ -2.17
BRCA1-202ENST00000354071 C15orf52Q6ZUT6 534 aaKnown RBP1.46□□□□□ -2.17
BRCA1-202ENST00000354071 RD3Q7Z3Z2 195 aa1.46□□□□□ -2.17
BRCA1-202ENST00000354071 YRDCQ86U90 279 aaKnown RBP1.46□□□□□ -2.17
BRCA1-202ENST00000354071 SLC38A6Q8IZM9 456 aa1.46□□□□□ -2.17
BRCA1-202ENST00000354071 SPEM1Q8N4L4 309 aa1.46□□□□□ -2.17
BRCA1-202ENST00000354071 DEFB123Q8N688 67 aa1.46□□□□□ -2.17
BRCA1-202ENST00000354071 FAM71CQ8NEG0 241 aa1.46□□□□□ -2.17
BRCA1-202ENST00000354071 OR10T2Q8NGX3 314 aa1.46□□□□□ -2.17
BRCA1-202ENST00000354071 PRSS3P2Q8NHM4 247 aa1.46□□□□□ -2.17
BRCA1-202ENST00000354071 DNAAF4Q8WXU2 420 aa1.46□□□□□ -2.17
BRCA1-202ENST00000354071 C14orf79Q96F83 325 aa1.46□□□□□ -2.17
BRCA1-202ENST00000354071 CFAP36Q96G28 342 aa1.46□□□□□ -2.17
BRCA1-202ENST00000354071 PRICKLE1Q96MT3 831 aaPredicted RBP1.46□□□□□ -2.17
BRCA1-202ENST00000354071 LRRC2Q9BYS8 371 aa1.46□□□□□ -2.17
BRCA1-202ENST00000354071 NT5C3AQ9H0P0 336 aa1.46□□□□□ -2.17
BRCA1-202ENST00000354071 EGLN3Q9H6Z9 239 aa1.46□□□□□ -2.17
BRCA1-202ENST00000354071 YY1AP1Q9H869 796 aa1.46□□□□□ -2.17
BRCA1-202ENST00000354071 MED20Q9H944 212 aa1.46□□□□□ -2.17
BRCA1-202ENST00000354071 TM9SF3Q9HD45 589 aa1.46□□□□□ -2.17
BRCA1-202ENST00000354071 PPANQ9NQ55 473 aaKnown RBP1.46□□□□□ -2.17
BRCA1-202ENST00000354071 ONECUT1Q9UBC0 465 aa1.46□□□□□ -2.17
BRCA1-202ENST00000354071 PCDHAC2Q9Y5I4 1007 aa1.46□□□□□ -2.17
BRCA1-202ENST00000354071 WDR19Q8NEZ3 1342 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.46□□□□□ -2.18
BRCA1-202ENST00000354071 HECTD4Q9Y4D8 3996 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 TUBGCP6Q96RT7 1819 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 UGGT1Q9NYU2 1555 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 ATRXP46100 2492 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 IGLV9-49A0A0B4J1Y8 123 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 ATP6AP2A0A1C7CYW4 349 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 XKRY2A2RUG3 117 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 MFSD2BA6NFX1 497 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 SERINC4A6NH21 518 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 NPIPA3F8WFD2 350 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 SGK1O00141 431 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 ANGPT2O15123 496 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 SIGLEC5O15389 551 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 CELA2AP08217 269 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 FRMD6-AS1P0C7T7 363 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 IGHV4-31P0DP07 118 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 TUBG1P23258 451 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 RBMS1P29558 406 aaKnown RBP1.46□□□□□ -2.18
BRCA1-202ENST00000354071 SLC1A3P43003 542 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 MAGEA11P43364 429 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 RPS4XP62701 263 aaKnown RBP1.46□□□□□ -2.18
BRCA1-202ENST00000354071 DDX39BQ13838 428 aaKnown RBP1.46□□□□□ -2.18
BRCA1-202ENST00000354071 ELAVL3Q14576 367 aaKnown RBP1.46□□□□□ -2.18
BRCA1-202ENST00000354071 MTX3Q5HYI7 312 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 ZSCAN25Q6NSZ9 544 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 PNCKQ6P2M8 343 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 TMEM207Q6UWW9 146 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 ITIH5Q86UX2 942 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 LINC01561Q8N1V8 128 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 SLC43A2Q8N370 569 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 ZNF397Q8NF99 534 aaPredicted RBP1.46□□□□□ -2.18
BRCA1-202ENST00000354071 STEAP2Q8NFT2 490 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 OR7A2PQ8NGA2 310 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 PNPT1Q8TCS8 783 aaKnown RBP1.46□□□□□ -2.18
BRCA1-202ENST00000354071 MTBPQ96DY7 904 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 ZNF274Q96GC6 653 aaPredicted RBP1.46□□□□□ -2.18
BRCA1-202ENST00000354071 CASD1Q96PB1 797 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 FCRL4Q96PJ5 515 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 RHNO1Q9BSD3 238 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 CAPS2Q9BXY5 557 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 MRPL13Q9BYD1 178 aaKnown RBP1.46□□□□□ -2.18
BRCA1-202ENST00000354071 SLITRK6Q9H5Y7 841 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 TUBG2Q9NRH3 451 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 HOMER3Q9NSC5 361 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 POT1Q9NUX5 634 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 RNF186Q9NXI6 227 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 MIOXQ9UGB7 285 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 SF3B1O75533 1304 aaKnown RBP eCLIP1.46□□□□□ -2.181e-9■■■■■ 99.9
BRCA1-202ENST00000354071 TTC41PQ6P2S7 1318 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.46□□□□□ -2.18
BRCA1-202ENST00000354071 CUL9Q8IWT3 2517 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 TNFSF12-TNFSF13A0A0A6YY99 330 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 CTAGE15A4D2H0 777 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 GAGE12JA6NER3 117 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms