RNA–Protein interactions for RNA: ENST00000353479.9

COL17A1-201, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL17A1, Length 5,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-201ENST00000353479 CD36P16671 472 aa14.21□□□□□ -0.13
COL17A1-201ENST00000353479 MLF2Q15773 248 aaPredicted RBP14.21□□□□□ -0.13
COL17A1-201ENST00000353479 KCTD11Q693B1 232 aa14.21□□□□□ -0.13
COL17A1-201ENST00000353479 CMKLR1Q99788 373 aa14.21□□□□□ -0.13
COL17A1-201ENST00000353479 TIMM29Q9BSF4 260 aa14.21□□□□□ -0.13
COL17A1-201ENST00000353479 DHRS4Q9BTZ2 278 aa14.21□□□□□ -0.13
COL17A1-201ENST00000353479 MKLN1Q9UL63 735 aa14.21□□□□□ -0.13
COL17A1-201ENST00000353479 ANHXE9PGG2 379 aa14.21□□□□□ -0.13
COL17A1-201ENST00000353479 EIF1AYO14602 144 aaKnown RBP14.21□□□□□ -0.13
COL17A1-201ENST00000353479 C1orf105O95561 183 aa14.21□□□□□ -0.13
COL17A1-201ENST00000353479 ETV4P43268 484 aa14.21□□□□□ -0.13
COL17A1-201ENST00000353479 ARSFP54793 590 aa14.21□□□□□ -0.13
COL17A1-201ENST00000353479 CDH15P55291 814 aa14.21□□□□□ -0.13
COL17A1-201ENST00000353479 ACY1Q03154 408 aa14.21□□□□□ -0.13
COL17A1-201ENST00000353479 IL18R1Q13478 541 aa14.21□□□□□ -0.13
COL17A1-201ENST00000353479 CEACAM7Q14002 265 aa14.21□□□□□ -0.13
COL17A1-201ENST00000353479 KIAA1614Q5VZ46 1190 aa14.21□□□□□ -0.13
COL17A1-201ENST00000353479 DCP2Q8IU60 420 aaKnown RBP14.21□□□□□ -0.13
COL17A1-201ENST00000353479 OSTF1Q92882 214 aa14.21□□□□□ -0.13
COL17A1-201ENST00000353479 PNPLA2Q96AD5 504 aa14.21□□□□□ -0.13
COL17A1-201ENST00000353479 DNAJC27Q9NZQ0 273 aa14.21□□□□□ -0.13
COL17A1-201ENST00000353479 PRDM4Q9UKN5 801 aa14.21□□□□□ -0.13
COL17A1-201ENST00000353479 PCDHB14Q9Y5E9 798 aa14.21□□□□□ -0.13
COL17A1-201ENST00000353479 LAMB2P55268 1798 aa14.21□□□□□ -0.13
COL17A1-201ENST00000353479 IGLV3-10A0A075B6K4 115 aa14.21□□□□□ -0.13
COL17A1-201ENST00000353479 A0A1W2PRG6 482 aa14.21□□□□□ -0.13
COL17A1-201ENST00000353479 A6NCN8 305 aa14.21□□□□□ -0.13
COL17A1-201ENST00000353479 MROH6A6NGR9 719 aa14.21□□□□□ -0.13
COL17A1-201ENST00000353479 RORAP35398 523 aa14.21□□□□□ -0.13
COL17A1-201ENST00000353479 NR0B2Q15466 257 aa14.21□□□□□ -0.13
COL17A1-201ENST00000353479 TMEM203Q969S6 136 aa14.21□□□□□ -0.13
COL17A1-201ENST00000353479 SLC6A17Q9H1V8 727 aa14.21□□□□□ -0.13
COL17A1-201ENST00000353479 SLC9B1P1A6NJY1 282 aa14.21□□□□□ -0.14
COL17A1-201ENST00000353479 TNFRSF21O75509 655 aa14.21□□□□□ -0.14
COL17A1-201ENST00000353479 IL33O95760 270 aa14.21□□□□□ -0.14
COL17A1-201ENST00000353479 PSMB5P28074 263 aa14.21□□□□□ -0.14
COL17A1-201ENST00000353479 PGFP49763 221 aa14.21□□□□□ -0.14
COL17A1-201ENST00000353479 MEP1AQ16819 746 aa14.21□□□□□ -0.14
COL17A1-201ENST00000353479 ARL9Q6T311 187 aa14.21□□□□□ -0.14
COL17A1-201ENST00000353479 TCEANCQ8N8B7 351 aa14.21□□□□□ -0.14
COL17A1-201ENST00000353479 ZSCAN1Q8NBB4 408 aa14.21□□□□□ -0.14
COL17A1-201ENST00000353479 ASB16Q96NS5 453 aa14.21□□□□□ -0.14
COL17A1-201ENST00000353479 BRF2Q9HAW0 419 aa14.21□□□□□ -0.14
COL17A1-201ENST00000353479 THAP10Q9P2Z0 257 aaPredicted RBP14.21□□□□□ -0.14
COL17A1-201ENST00000353479 SOBPA7XYQ1 873 aa14.2□□□□□ -0.14
COL17A1-201ENST00000353479 FGF4P08620 206 aa14.2□□□□□ -0.14
COL17A1-201ENST00000353479 MAP3K8P41279 467 aa14.2□□□□□ -0.14
COL17A1-201ENST00000353479 PER3P56645 1201 aa14.2□□□□□ -0.14
COL17A1-201ENST00000353479 SEMA3BQ13214 749 aa14.2□□□□□ -0.14
COL17A1-201ENST00000353479 RBM12BQ8IXT5 1001 aaKnown RBP14.2□□□□□ -0.14
COL17A1-201ENST00000353479 ZNF480Q8WV37 535 aa14.2□□□□□ -0.14
COL17A1-201ENST00000353479 CIDECQ96AQ7 238 aaPredicted RBP14.2□□□□□ -0.14
COL17A1-201ENST00000353479 TMCO6Q96DC7 493 aa14.2□□□□□ -0.14
COL17A1-201ENST00000353479 PIP5K1AQ99755 562 aa14.2□□□□□ -0.14
COL17A1-201ENST00000353479 POLDIP3Q9BY77 421 aaKnown RBP14.2□□□□□ -0.14
COL17A1-201ENST00000353479 TRPV5Q9NQA5 729 aa14.2□□□□□ -0.14
COL17A1-201ENST00000353479 WBP11Q9Y2W2 641 aaKnown RBP14.2□□□□□ -0.14
COL17A1-201ENST00000353479 FAM25EA8MYX2 175 aa14.2□□□□□ -0.14
COL17A1-201ENST00000353479 J3QLW9 94 aa14.2□□□□□ -0.14
COL17A1-201ENST00000353479 DHRS4L1P0CG22 281 aa14.2□□□□□ -0.14
COL17A1-201ENST00000353479 ZNF19P17023 458 aa14.2□□□□□ -0.14
COL17A1-201ENST00000353479 FCHO2Q0JRZ9 810 aa14.2□□□□□ -0.14
COL17A1-201ENST00000353479 RASGEF1BQ0VAM2 473 aa14.2□□□□□ -0.14
COL17A1-201ENST00000353479 PMS2P3Q13401 168 aa14.2□□□□□ -0.14
COL17A1-201ENST00000353479 BLMHQ13867 455 aa14.2□□□□□ -0.14
COL17A1-201ENST00000353479 CDKN3Q16667 212 aa14.2□□□□□ -0.14
COL17A1-201ENST00000353479 EXOC3L2Q2M3D2 409 aa14.2□□□□□ -0.14
COL17A1-201ENST00000353479 LRIT3Q3SXY7 679 aa14.2□□□□□ -0.14
COL17A1-201ENST00000353479 OR5L2Q8NGL0 311 aa14.2□□□□□ -0.14
COL17A1-201ENST00000353479 C9orf43Q8TAL5 461 aaPredicted RBP14.2□□□□□ -0.14
COL17A1-201ENST00000353479 TAAR2Q9P1P5 351 aa14.2□□□□□ -0.14
COL17A1-201ENST00000353479 A0A0A6YYC8 382 aaPredicted RBP14.2□□□□□ -0.14
COL17A1-201ENST00000353479 I3L1I5 382 aaPredicted RBP14.2□□□□□ -0.14
COL17A1-201ENST00000353479 SGK494L7N484 410 aa14.2□□□□□ -0.14
COL17A1-201ENST00000353479 PPP6CO00743 305 aa14.2□□□□□ -0.14
COL17A1-201ENST00000353479 ARHGEF15O94989 841 aa14.2□□□□□ -0.14
COL17A1-201ENST00000353479 HBQ1P09105 142 aa14.2□□□□□ -0.14
COL17A1-201ENST00000353479 NR2C1P13056 603 aa14.2□□□□□ -0.14
COL17A1-201ENST00000353479 PVRP15151 417 aa14.2□□□□□ -0.14
COL17A1-201ENST00000353479 ITGA3P26006 1051 aa14.2□□□□□ -0.14
COL17A1-201ENST00000353479 SLC9A3P48764 834 aa14.2□□□□□ -0.14
COL17A1-201ENST00000353479 TMEM225Q6GV28 225 aa14.2□□□□□ -0.14
COL17A1-201ENST00000353479 TMPRSS9Q7Z410 1059 aa14.2□□□□□ -0.14
COL17A1-201ENST00000353479 EPHA6Q9UF33 1036 aa14.2□□□□□ -0.14
COL17A1-201ENST00000353479 BCAT2O15382 392 aaPredicted RBP14.2□□□□□ -0.14
COL17A1-201ENST00000353479 RDH16O75452 317 aa14.2□□□□□ -0.14
COL17A1-201ENST00000353479 HK1P19367 917 aa14.2□□□□□ -0.14
COL17A1-201ENST00000353479 MRPL58Q14197 206 aaKnown RBP14.2□□□□□ -0.14
COL17A1-201ENST00000353479 C9orf50Q5SZB4 431 aa14.2□□□□□ -0.14
COL17A1-201ENST00000353479 ASB11Q8WXH4 323 aa14.2□□□□□ -0.14
COL17A1-201ENST00000353479 BORCS5Q969J3 196 aa14.2□□□□□ -0.14
COL17A1-201ENST00000353479 MAL2Q969L2 176 aa14.2□□□□□ -0.14
COL17A1-201ENST00000353479 ECHDC3Q96DC8 303 aa14.2□□□□□ -0.14
COL17A1-201ENST00000353479 LPAR4Q99677 370 aa14.2□□□□□ -0.14
COL17A1-201ENST00000353479 INPP5KQ9BT40 448 aa14.2□□□□□ -0.14
COL17A1-201ENST00000353479 ZNF670-ZNF695F2Z2N8 137 aa14.2□□□□□ -0.14
COL17A1-201ENST00000353479 VILLO15195 856 aa14.2□□□□□ -0.14
COL17A1-201ENST00000353479 ATP6AP1Q15904 470 aa14.2□□□□□ -0.14
COL17A1-201ENST00000353479 ZNF77Q15935 545 aa14.2□□□□□ -0.14
COL17A1-201ENST00000353479 UGT3A2Q3SY77 523 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms