RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 GABRR3A8MPY1 467 aa8.17□□□□□ -1.1
TRIM55-204ENST00000353317 M0R129 80 aa8.17□□□□□ -1.1
TRIM55-204ENST00000353317 TNFRSF11BO00300 401 aa8.17□□□□□ -1.1
TRIM55-204ENST00000353317 QSOX1O00391 747 aa8.17□□□□□ -1.1
TRIM55-204ENST00000353317 HAT1O14929 419 aa8.17□□□□□ -1.1
TRIM55-204ENST00000353317 SLC16A5O15375 505 aa8.17□□□□□ -1.1
TRIM55-204ENST00000353317 ASNA1O43681 348 aa8.17□□□□□ -1.1
TRIM55-204ENST00000353317 PCDH7O60245 1069 aa8.17□□□□□ -1.1
TRIM55-204ENST00000353317 OPN1SWP03999 348 aa8.17□□□□□ -1.1
TRIM55-204ENST00000353317 HSMCR30P0CW71 290 aa8.17□□□□□ -1.1
TRIM55-204ENST00000353317 JUPP14923 745 aa8.17□□□□□ -1.1
TRIM55-204ENST00000353317 GABRB1P18505 474 aa8.17□□□□□ -1.1
TRIM55-204ENST00000353317 TCEA1P23193 301 aaKnown RBP8.17□□□□□ -1.1
TRIM55-204ENST00000353317 S100A5P33763 92 aa8.17□□□□□ -1.1
TRIM55-204ENST00000353317 OR1E2P47887 323 aa8.17□□□□□ -1.1
TRIM55-204ENST00000353317 RGS6P49758 472 aa8.17□□□□□ -1.1
TRIM55-204ENST00000353317 HNMTP50135 292 aa8.17□□□□□ -1.1
TRIM55-204ENST00000353317 CASP9P55211 416 aa8.17□□□□□ -1.1
TRIM55-204ENST00000353317 STARD6P59095 220 aa8.17□□□□□ -1.1
TRIM55-204ENST00000353317 SP140Q13342 867 aa8.17□□□□□ -1.1
TRIM55-204ENST00000353317 GAB1Q13480 694 aa8.17□□□□□ -1.1
TRIM55-204ENST00000353317 DDX39BQ13838 428 aaKnown RBP8.17□□□□□ -1.1
TRIM55-204ENST00000353317 MDC1Q14676 2089 aaKnown RBP8.17□□□□□ -1.1
TRIM55-204ENST00000353317 RGNQ15493 299 aa8.17□□□□□ -1.1
TRIM55-204ENST00000353317 ARMCX4Q5H9R4 360 aa8.17□□□□□ -1.1
TRIM55-204ENST00000353317 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.17□□□□□ -1.1
TRIM55-204ENST00000353317 CCBE1Q6UXH8 406 aaPredicted RBP8.17□□□□□ -1.1
TRIM55-204ENST00000353317 NAGSQ8N159 534 aa8.17□□□□□ -1.1
TRIM55-204ENST00000353317 TCAIMQ8N3R3 496 aa8.17□□□□□ -1.1
TRIM55-204ENST00000353317 SPPL2AQ8TCT8 520 aa8.17□□□□□ -1.1
TRIM55-204ENST00000353317 ATL1Q8WXF7 558 aa8.17□□□□□ -1.1
TRIM55-204ENST00000353317 TSACCQ96A04 125 aaPredicted RBP8.17□□□□□ -1.1
TRIM55-204ENST00000353317 C11orf24Q96F05 449 aaPredicted RBP8.17□□□□□ -1.1
TRIM55-204ENST00000353317 CHCHD6Q9BRQ6 235 aa8.17□□□□□ -1.1
TRIM55-204ENST00000353317 MENTQ9BUN1 341 aa8.17□□□□□ -1.1
TRIM55-204ENST00000353317 DUSP26Q9BV47 211 aa8.17□□□□□ -1.1
TRIM55-204ENST00000353317 ZCCHC2Q9C0B9 1178 aaKnown RBP8.17□□□□□ -1.1
TRIM55-204ENST00000353317 DNAJC11Q9NVH1 559 aa8.17□□□□□ -1.1
TRIM55-204ENST00000353317 ADPRHL2Q9NX46 363 aa8.17□□□□□ -1.1
TRIM55-204ENST00000353317 ZNF226Q9NYT6 803 aa8.17□□□□□ -1.1
TRIM55-204ENST00000353317 TAS2R16Q9NYV7 291 aa8.17□□□□□ -1.1
TRIM55-204ENST00000353317 VPS29Q9UBQ0 182 aa8.17□□□□□ -1.1
TRIM55-204ENST00000353317 MOSPD1Q9UJG1 213 aa8.17□□□□□ -1.1
TRIM55-204ENST00000353317 NCKAP1Q9Y2A7 1128 aa8.17□□□□□ -1.1
TRIM55-204ENST00000353317 PCDHGA3Q9Y5H0 932 aa8.17□□□□□ -1.1
TRIM55-204ENST00000353317 PCDHGA2Q9Y5H1 932 aa8.17□□□□□ -1.1
TRIM55-204ENST00000353317 CABIN1Q9Y6J0 2220 aa8.17□□□□□ -1.1
TRIM55-204ENST00000353317 SPAG17Q6Q759 2223 aa8.17□□□□□ -1.1
TRIM55-204ENST00000353317 TECTAO75443 2155 aa8.17□□□□□ -1.1
TRIM55-204ENST00000353317 SERTM1A2A2V5 107 aa8.17□□□□□ -1.1
TRIM55-204ENST00000353317 OR52A4PA6NMU1 304 aa8.17□□□□□ -1.1
TRIM55-204ENST00000353317 CHURC1-FNTBB4DL54 471 aa8.17□□□□□ -1.1
TRIM55-204ENST00000353317 E7EQ34 232 aa8.17□□□□□ -1.1
TRIM55-204ENST00000353317 KMOO15229 486 aa8.17□□□□□ -1.1
TRIM55-204ENST00000353317 DYRK3O43781 588 aa8.17□□□□□ -1.1
TRIM55-204ENST00000353317 SSX4O60224 188 aa8.17□□□□□ -1.1
TRIM55-204ENST00000353317 PRMT3O60678 531 aa8.17□□□□□ -1.1
TRIM55-204ENST00000353317 SH3BGRLO75368 114 aa8.17□□□□□ -1.1
TRIM55-204ENST00000353317 ETHE1O95571 254 aa8.17□□□□□ -1.1
TRIM55-204ENST00000353317 SEMA4FO95754 770 aa8.17□□□□□ -1.1
TRIM55-204ENST00000353317 ADRA2AP08913 450 aa8.17□□□□□ -1.1
TRIM55-204ENST00000353317 CYP2A7P20853 494 aa8.17□□□□□ -1.1
TRIM55-204ENST00000353317 AK4P27144 223 aaPredicted RBP8.17□□□□□ -1.1
TRIM55-204ENST00000353317 TEAD1P28347 426 aa8.17□□□□□ -1.1
TRIM55-204ENST00000353317 CASP3P42574 277 aa8.17□□□□□ -1.1
TRIM55-204ENST00000353317 CLCNKAP51800 687 aa8.17□□□□□ -1.1
TRIM55-204ENST00000353317 SELENOWP63302 87 aa8.17□□□□□ -1.1
TRIM55-204ENST00000353317 ST3GAL4Q11206 333 aa8.17□□□□□ -1.1
TRIM55-204ENST00000353317 C6orf183Q5T699 404 aa8.17□□□□□ -1.1
TRIM55-204ENST00000353317 SPATC1Q76KD6 591 aa8.17□□□□□ -1.1
TRIM55-204ENST00000353317 TRIM69Q86WT6 500 aa8.17□□□□□ -1.1
TRIM55-204ENST00000353317 SLC22A18ASQ8N1D0 253 aa8.17□□□□□ -1.1
TRIM55-204ENST00000353317 CYP4Z2PQ8N1L4 340 aa8.17□□□□□ -1.1
TRIM55-204ENST00000353317 CELF2-AS1Q8N7Q2 184 aa8.17□□□□□ -1.1
TRIM55-204ENST00000353317 OR10G2Q8NGC3 310 aa8.17□□□□□ -1.1
TRIM55-204ENST00000353317 WDR20Q8TBZ3 569 aa8.17□□□□□ -1.1
TRIM55-204ENST00000353317 MED8Q96G25 268 aa8.17□□□□□ -1.1
TRIM55-204ENST00000353317 ZNF514Q96K75 400 aaPredicted RBP8.17□□□□□ -1.1
TRIM55-204ENST00000353317 INSM2Q96T92 566 aaPredicted RBP8.17□□□□□ -1.1
TRIM55-204ENST00000353317 SPNS1Q9H2V7 528 aa8.17□□□□□ -1.1
TRIM55-204ENST00000353317 TCEAL2Q9H3H9 227 aaPredicted RBP8.17□□□□□ -1.1
TRIM55-204ENST00000353317 GPATCH2Q9NW75 528 aa8.17□□□□□ -1.1
TRIM55-204ENST00000353317 WSB2Q9NYS7 404 aaPredicted RBP8.17□□□□□ -1.1
TRIM55-204ENST00000353317 CCDC59Q9P031 241 aaKnown RBP8.17□□□□□ -1.1
TRIM55-204ENST00000353317 RAPGEFL1Q9UHV5 662 aa8.17□□□□□ -1.1
TRIM55-204ENST00000353317 KLF15Q9UIH9 416 aa8.17□□□□□ -1.1
TRIM55-204ENST00000353317 PCDHGB6Q9Y5F9 930 aa8.17□□□□□ -1.1
TRIM55-204ENST00000353317 PRAMEF25A6NGN4 478 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 MAN2B1O00754 1011 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 SCAMP2O15127 329 aaKnown RBP8.16□□□□□ -1.1
TRIM55-204ENST00000353317 IGLV3-19P01714 112 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 EIF2S1P05198 315 aaKnown RBP8.16□□□□□ -1.1
TRIM55-204ENST00000353317 PCSK2P16519 638 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 ZNF24P17028 368 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 UGT2B15P54855 530 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 AP1S2P56377 157 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 IRF8Q02556 426 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 TP53BP2Q13625 1128 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 DOC2BQ14184 412 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 C10orf62Q5T681 223 aaPredicted RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms