RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 WDR89Q96FK6 387 aaPredicted RBP10.16□□□□□ -0.78
CAPN3-203ENST00000349748 TPD52L3Q96J77 140 aa10.16□□□□□ -0.78
CAPN3-203ENST00000349748 HSH2DQ96JZ2 352 aa10.16□□□□□ -0.78
CAPN3-203ENST00000349748 RHOVQ96L33 236 aa10.16□□□□□ -0.78
CAPN3-203ENST00000349748 IL4I1Q96RQ9 567 aa10.16□□□□□ -0.78
CAPN3-203ENST00000349748 NIPSNAP1Q9BPW8 284 aa10.16□□□□□ -0.78
CAPN3-203ENST00000349748 FICDQ9BVA6 458 aa10.16□□□□□ -0.78
CAPN3-203ENST00000349748 PORCNQ9H237 461 aa10.16□□□□□ -0.78
CAPN3-203ENST00000349748 ZNF624Q9P2J8 865 aaPredicted RBP10.16□□□□□ -0.78
CAPN3-203ENST00000349748 ZNF214Q9UL59 606 aaPredicted RBP10.16□□□□□ -0.78
CAPN3-203ENST00000349748 MGAMO43451 1857 aa10.16□□□□□ -0.78
CAPN3-203ENST00000349748 SIP14410 1827 aa10.16□□□□□ -0.78
CAPN3-203ENST00000349748 GRXCR2A6NFK2 248 aa10.16□□□□□ -0.78
CAPN3-203ENST00000349748 ANKDD1BA6NHY2 528 aa10.16□□□□□ -0.78
CAPN3-203ENST00000349748 J3KR12 359 aa10.16□□□□□ -0.78
CAPN3-203ENST00000349748 TERTO14746 1132 aaKnown RBP10.16□□□□□ -0.78
CAPN3-203ENST00000349748 GLUD1P00367 558 aa10.16□□□□□ -0.78
CAPN3-203ENST00000349748 PIGRP01833 764 aa10.16□□□□□ -0.78
CAPN3-203ENST00000349748 HPXP02790 462 aa10.16□□□□□ -0.78
CAPN3-203ENST00000349748 LCP1P13796 627 aa10.16□□□□□ -0.78
CAPN3-203ENST00000349748 PAICSP22234 425 aaKnown RBP10.16□□□□□ -0.78
CAPN3-203ENST00000349748 HOXC13P31276 330 aa10.16□□□□□ -0.78
CAPN3-203ENST00000349748 ACTR1AP61163 376 aa10.16□□□□□ -0.78
CAPN3-203ENST00000349748 DEFA6Q01524 100 aa10.16□□□□□ -0.78
CAPN3-203ENST00000349748 KIAA0040Q15053 153 aa10.16□□□□□ -0.78
CAPN3-203ENST00000349748 NR6A1Q15406 480 aa10.16□□□□□ -0.78
CAPN3-203ENST00000349748 GPR142Q7Z601 462 aa10.16□□□□□ -0.78
CAPN3-203ENST00000349748 SERINC5Q86VE9 423 aa10.16□□□□□ -0.78
CAPN3-203ENST00000349748 ZNF687Q8N1G0 1237 aa10.16□□□□□ -0.78
CAPN3-203ENST00000349748 ELP5Q8TE02 316 aa10.16□□□□□ -0.78
CAPN3-203ENST00000349748 ADAMTS19Q8TE59 1207 aa10.16□□□□□ -0.78
CAPN3-203ENST00000349748 SCARB1Q8WTV0 552 aa10.16□□□□□ -0.78
CAPN3-203ENST00000349748 BRI3BPQ8WY22 251 aa10.16□□□□□ -0.78
CAPN3-203ENST00000349748 KCNJ9Q92806 393 aa10.16□□□□□ -0.78
CAPN3-203ENST00000349748 TADA1Q96BN2 335 aa10.16□□□□□ -0.78
CAPN3-203ENST00000349748 TSPAN17Q96FV3 270 aa10.16□□□□□ -0.78
CAPN3-203ENST00000349748 OR2M2Q96R28 347 aa10.16□□□□□ -0.78
CAPN3-203ENST00000349748 NELL2Q99435 816 aa10.16□□□□□ -0.78
CAPN3-203ENST00000349748 SPRTNQ9H040 489 aaPredicted RBP10.16□□□□□ -0.78
CAPN3-203ENST00000349748 TXNRD2Q9NNW7 524 aa10.16□□□□□ -0.78
CAPN3-203ENST00000349748 FZD10Q9ULW2 581 aa10.16□□□□□ -0.78
CAPN3-203ENST00000349748 PCDHB7Q9Y5E2 793 aa10.16□□□□□ -0.78
CAPN3-203ENST00000349748 RNF215Q9Y6U7 377 aa10.16□□□□□ -0.78
CAPN3-203ENST00000349748 OR51F1A6NGY5 319 aa10.15□□□□□ -0.78
CAPN3-203ENST00000349748 SEMA7AO75326 666 aa10.15□□□□□ -0.78
CAPN3-203ENST00000349748 CBSLP0DN79 551 aa10.15□□□□□ -0.78
CAPN3-203ENST00000349748 ITPKAP23677 461 aa10.15□□□□□ -0.78
CAPN3-203ENST00000349748 CBSP35520 551 aa10.15□□□□□ -0.78
CAPN3-203ENST00000349748 ARL2P36404 184 aa10.15□□□□□ -0.78
CAPN3-203ENST00000349748 CCR6P51684 374 aa10.15□□□□□ -0.78
CAPN3-203ENST00000349748 FOXK2Q01167 660 aa10.15□□□□□ -0.78
CAPN3-203ENST00000349748 RNASE12Q5GAN4 147 aaKnown RBP10.15□□□□□ -0.78
CAPN3-203ENST00000349748 SPRYD7Q5W111 196 aa10.15□□□□□ -0.78
CAPN3-203ENST00000349748 PDE12Q6L8Q7 609 aaKnown RBP10.15□□□□□ -0.78
CAPN3-203ENST00000349748 SSX9Q7RTT3 188 aa10.15□□□□□ -0.78
CAPN3-203ENST00000349748 DENND6BQ8NEG7 585 aa10.15□□□□□ -0.78
CAPN3-203ENST00000349748 TBC1D20Q96BZ9 403 aa10.15□□□□□ -0.78
CAPN3-203ENST00000349748 C1GALT1C1Q96EU7 318 aa10.15□□□□□ -0.78
CAPN3-203ENST00000349748 C11orf84Q9BUA3 381 aaPredicted RBP10.15□□□□□ -0.78
CAPN3-203ENST00000349748 ARHGAP39Q9C0H5 1083 aa10.15□□□□□ -0.78
CAPN3-203ENST00000349748 TFB2MQ9H5Q4 396 aaKnown RBP10.15□□□□□ -0.78
CAPN3-203ENST00000349748 DDX31Q9H8H2 851 aaKnown RBP10.15□□□□□ -0.78
CAPN3-203ENST00000349748 PDGFCQ9NRA1 345 aa10.15□□□□□ -0.78
CAPN3-203ENST00000349748 KLHL42Q9P2K6 505 aa10.15□□□□□ -0.78
CAPN3-203ENST00000349748 EPHA6Q9UF33 1036 aa10.15□□□□□ -0.78
CAPN3-203ENST00000349748 SAMD4AQ9UPU9 718 aaKnown RBP10.15□□□□□ -0.78
CAPN3-203ENST00000349748 ASB1Q9Y576 335 aa10.15□□□□□ -0.78
CAPN3-203ENST00000349748 ADAM12O43184 909 aa10.15□□□□□ -0.78
CAPN3-203ENST00000349748 S100A8P05109 93 aa10.15□□□□□ -0.78
CAPN3-203ENST00000349748 UROSP10746 265 aa10.15□□□□□ -0.78
CAPN3-203ENST00000349748 MUC1P15941 1255 aaPredicted RBP10.15□□□□□ -0.78
CAPN3-203ENST00000349748 PTBP1P26599 531 aaKnown RBP eCLIP10.15□□□□□ -0.78
CAPN3-203ENST00000349748 GIFP27352 417 aa10.15□□□□□ -0.78
CAPN3-203ENST00000349748 AKT1P31749 480 aa10.15□□□□□ -0.78
CAPN3-203ENST00000349748 MATKP42679 507 aa10.15□□□□□ -0.78
CAPN3-203ENST00000349748 STK19P49842 368 aaPredicted RBP10.15□□□□□ -0.78
CAPN3-203ENST00000349748 GZMMP51124 257 aa10.15□□□□□ -0.78
CAPN3-203ENST00000349748 CLDN8P56748 225 aa10.15□□□□□ -0.78
CAPN3-203ENST00000349748 SLC3A1Q07837 685 aa10.15□□□□□ -0.78
CAPN3-203ENST00000349748 CAPSQ13938 189 aa10.15□□□□□ -0.78
CAPN3-203ENST00000349748 RAB33AQ14088 237 aa10.15□□□□□ -0.78
CAPN3-203ENST00000349748 GUCA2BQ16661 112 aa10.15□□□□□ -0.78
CAPN3-203ENST00000349748 MICBQ29980 383 aa10.15□□□□□ -0.78
CAPN3-203ENST00000349748 XKR3Q5GH77 459 aa10.15□□□□□ -0.78
CAPN3-203ENST00000349748 C3orf38Q5JPI3 329 aa10.15□□□□□ -0.78
CAPN3-203ENST00000349748 ANKS6Q68DC2 871 aa10.15□□□□□ -0.78
CAPN3-203ENST00000349748 OVOS1Q6IE37 1185 aa10.15□□□□□ -0.78
CAPN3-203ENST00000349748 NUDT18Q6ZVK8 323 aa10.15□□□□□ -0.78
CAPN3-203ENST00000349748 TRIM69Q86WT6 500 aa10.15□□□□□ -0.78
CAPN3-203ENST00000349748 FBXO39Q8N4B4 442 aa10.15□□□□□ -0.78
CAPN3-203ENST00000349748 KLHL36Q8N4N3 616 aa10.15□□□□□ -0.78
CAPN3-203ENST00000349748 DNAJB8Q8NHS0 232 aa10.15□□□□□ -0.78
CAPN3-203ENST00000349748 AP3S1Q92572 193 aa10.15□□□□□ -0.78
CAPN3-203ENST00000349748 KCTD7Q96MP8 289 aa10.15□□□□□ -0.78
CAPN3-203ENST00000349748 NLNQ9BYT8 704 aa10.15□□□□□ -0.78
CAPN3-203ENST00000349748 CHST2Q9Y4C5 530 aa10.15□□□□□ -0.78
CAPN3-203ENST00000349748 TRIP11Q15643 1979 aa10.15□□□□□ -0.78
CAPN3-203ENST00000349748 GABRR3A8MPY1 467 aa10.14□□□□□ -0.79
CAPN3-203ENST00000349748 C2orf74A8MZ97 194 aa10.14□□□□□ -0.79
CAPN3-203ENST00000349748 FAM220BPB1ANY3 271 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms