RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 SYT16Q17RD7 645 aa7.33□□□□□ -1.24
UBE2D3-204ENST00000349311 COL28A1Q2UY09 1125 aa7.33□□□□□ -1.24
UBE2D3-204ENST00000349311 ATP6AP1LQ52LC2 224 aa7.33□□□□□ -1.24
UBE2D3-204ENST00000349311 CLLU1Q5K131 121 aa7.33□□□□□ -1.24
UBE2D3-204ENST00000349311 LCN1P1Q5VSP4 162 aa7.33□□□□□ -1.24
UBE2D3-204ENST00000349311 KIAA1614Q5VZ46 1190 aa7.33□□□□□ -1.24
UBE2D3-204ENST00000349311 KDM4DQ6B0I6 523 aa7.33□□□□□ -1.24
UBE2D3-204ENST00000349311 BRAT1Q6PJG6 821 aa7.33□□□□□ -1.24
UBE2D3-204ENST00000349311 PLET1Q6UQ28 207 aa7.33□□□□□ -1.24
UBE2D3-204ENST00000349311 ENPP6Q6UWR7 440 aa7.33□□□□□ -1.24
UBE2D3-204ENST00000349311 DGLUCYQ7Z3D6 616 aa7.33□□□□□ -1.24
UBE2D3-204ENST00000349311 COMMD7Q86VX2 200 aa7.33□□□□□ -1.24
UBE2D3-204ENST00000349311 KLHDC8BQ8IXV7 354 aa7.33□□□□□ -1.24
UBE2D3-204ENST00000349311 RBFAQ8N0V3 343 aa7.33□□□□□ -1.24
UBE2D3-204ENST00000349311 Q8N1X5 172 aa7.33□□□□□ -1.24
UBE2D3-204ENST00000349311 C1orf52Q8N6N3 182 aaKnown RBP7.33□□□□□ -1.24
UBE2D3-204ENST00000349311 ZNF675Q8TD23 568 aa7.33□□□□□ -1.24
UBE2D3-204ENST00000349311 PHF21BQ96EK2 531 aa7.33□□□□□ -1.24
UBE2D3-204ENST00000349311 PDXPQ96GD0 296 aa7.33□□□□□ -1.24
UBE2D3-204ENST00000349311 ZBTB18Q99592 522 aa7.33□□□□□ -1.24
UBE2D3-204ENST00000349311 TBL1YQ9BQ87 522 aa7.33□□□□□ -1.24
UBE2D3-204ENST00000349311 SRRQ9GZT4 340 aa7.33□□□□□ -1.24
UBE2D3-204ENST00000349311 C11orf54Q9H0W9 315 aaPredicted RBP7.33□□□□□ -1.24
UBE2D3-204ENST00000349311 RPF1Q9H9Y2 349 aaKnown RBP7.33□□□□□ -1.24
UBE2D3-204ENST00000349311 WASH6PQ9NQA3 447 aa7.33□□□□□ -1.24
UBE2D3-204ENST00000349311 SLC39A1Q9NY26 324 aa7.33□□□□□ -1.24
UBE2D3-204ENST00000349311 GPRC5BQ9NZH0 403 aa7.33□□□□□ -1.24
UBE2D3-204ENST00000349311 ZNF224Q9NZL3 707 aa7.33□□□□□ -1.24
UBE2D3-204ENST00000349311 KIF17Q9P2E2 1029 aa7.33□□□□□ -1.24
UBE2D3-204ENST00000349311 PSORS1C1Q9UIG5 152 aa7.33□□□□□ -1.24
UBE2D3-204ENST00000349311 STUB1Q9UNE7 303 aa7.33□□□□□ -1.24
UBE2D3-204ENST00000349311 AAR2Q9Y312 384 aaKnown RBP7.33□□□□□ -1.24
UBE2D3-204ENST00000349311 DERAQ9Y315 318 aa7.33□□□□□ -1.24
UBE2D3-204ENST00000349311 PKP3Q9Y446 797 aa7.33□□□□□ -1.24
UBE2D3-204ENST00000349311 CMAHPQ9Y471 501 aa7.33□□□□□ -1.24
UBE2D3-204ENST00000349311 DNAJC15Q9Y5T4 150 aa7.33□□□□□ -1.24
UBE2D3-204ENST00000349311 SESN1Q9Y6P5 492 aa7.33□□□□□ -1.24
UBE2D3-204ENST00000349311 TTC3P53804 2025 aa7.33□□□□□ -1.24
UBE2D3-204ENST00000349311 HTTP42858 3142 aa7.33□□□□□ -1.24
UBE2D3-204ENST00000349311 TSPAN4O14817 238 aa7.32□□□□□ -1.24
UBE2D3-204ENST00000349311 DCLK1O15075 740 aa7.32□□□□□ -1.24
UBE2D3-204ENST00000349311 RGS5O15539 181 aa7.32□□□□□ -1.24
UBE2D3-204ENST00000349311 ORC5O43913 435 aa7.32□□□□□ -1.24
UBE2D3-204ENST00000349311 KIAA0513O60268 411 aa7.32□□□□□ -1.24
UBE2D3-204ENST00000349311 ATG13O75143 517 aa7.32□□□□□ -1.24
UBE2D3-204ENST00000349311 SLC43A1O75387 559 aa7.32□□□□□ -1.24
UBE2D3-204ENST00000349311 VTNP04004 478 aa7.32□□□□□ -1.24
UBE2D3-204ENST00000349311 GJB1P08034 283 aa7.32□□□□□ -1.24
UBE2D3-204ENST00000349311 F7P08709 466 aaPredicted RBP7.32□□□□□ -1.24
UBE2D3-204ENST00000349311 ARF4P18085 180 aaPredicted RBP7.32□□□□□ -1.24
UBE2D3-204ENST00000349311 GCSHP23434 173 aa7.32□□□□□ -1.24
UBE2D3-204ENST00000349311 HTR7P34969 479 aa7.32□□□□□ -1.24
UBE2D3-204ENST00000349311 SLC1A2P43004 574 aa7.32□□□□□ -1.24
UBE2D3-204ENST00000349311 ZFP36L2P47974 494 aaKnown RBP7.32□□□□□ -1.24
UBE2D3-204ENST00000349311 NRIP1P48552 1158 aa7.32□□□□□ -1.24
UBE2D3-204ENST00000349311 RORCP51449 518 aa7.32□□□□□ -1.24
UBE2D3-204ENST00000349311 GBX2P52951 348 aaPredicted RBP7.32□□□□□ -1.24
UBE2D3-204ENST00000349311 LIMK1P53667 647 aa7.32□□□□□ -1.24
UBE2D3-204ENST00000349311 GEMP55040 296 aa7.32□□□□□ -1.24
UBE2D3-204ENST00000349311 AP1S2P56377 157 aa7.32□□□□□ -1.24
UBE2D3-204ENST00000349311 RRAS2P62070 204 aaPredicted RBP7.32□□□□□ -1.24
UBE2D3-204ENST00000349311 ZNF33AQ06730 810 aa7.32□□□□□ -1.24
UBE2D3-204ENST00000349311 FOXD4Q12950 439 aaPredicted RBP7.32□□□□□ -1.24
UBE2D3-204ENST00000349311 LCP2Q13094 533 aa7.32□□□□□ -1.24
UBE2D3-204ENST00000349311 CTBP1Q13363 440 aa7.32□□□□□ -1.24
UBE2D3-204ENST00000349311 SIM2Q14190 667 aaPredicted RBP7.32□□□□□ -1.24
UBE2D3-204ENST00000349311 GNA13Q14344 377 aa7.32□□□□□ -1.24
UBE2D3-204ENST00000349311 NFE2L1Q14494 772 aa7.32□□□□□ -1.24
UBE2D3-204ENST00000349311 GBX1Q14549 363 aa7.32□□□□□ -1.24
UBE2D3-204ENST00000349311 SEMA3AQ14563 771 aa7.32□□□□□ -1.24
UBE2D3-204ENST00000349311 ZNF267Q14586 743 aaPredicted RBP7.32□□□□□ -1.24
UBE2D3-204ENST00000349311 PDZK1Q5T2W1 519 aa7.32□□□□□ -1.24
UBE2D3-204ENST00000349311 ATG9BQ674R7 924 aa7.32□□□□□ -1.24
UBE2D3-204ENST00000349311 RAP1GAP2Q684P5 730 aa7.32□□□□□ -1.24
UBE2D3-204ENST00000349311 ZNF529Q6P280 563 aa7.32□□□□□ -1.24
UBE2D3-204ENST00000349311 ZNF549Q6P9A3 640 aa7.32□□□□□ -1.24
UBE2D3-204ENST00000349311 DLEU7Q6UYE1 221 aa7.32□□□□□ -1.24
UBE2D3-204ENST00000349311 TMEM179BQ7Z7N9 219 aa7.32□□□□□ -1.24
UBE2D3-204ENST00000349311 GPR149Q86SP6 731 aa7.32□□□□□ -1.24
UBE2D3-204ENST00000349311 GPAT4Q86UL3 456 aa7.32□□□□□ -1.24
UBE2D3-204ENST00000349311 SERINC5Q86VE9 423 aa7.32□□□□□ -1.24
UBE2D3-204ENST00000349311 MFSD6LQ8IWD5 586 aa7.32□□□□□ -1.24
UBE2D3-204ENST00000349311 GHDCQ8N2G8 530 aa7.32□□□□□ -1.24
UBE2D3-204ENST00000349311 CARNMT1Q8N4J0 409 aa7.32□□□□□ -1.24
UBE2D3-204ENST00000349311 PTGR2Q8N8N7 351 aaPredicted RBP7.32□□□□□ -1.24
UBE2D3-204ENST00000349311 ZNF548Q8NEK5 533 aaPredicted RBP7.32□□□□□ -1.24
UBE2D3-204ENST00000349311 OR4M2Q8NGB6 313 aa7.32□□□□□ -1.24
UBE2D3-204ENST00000349311 VANGL1Q8TAA9 524 aaPredicted RBP7.32□□□□□ -1.24
UBE2D3-204ENST00000349311 AKAP1Q92667 903 aaKnown RBP eCLIP7.32□□□□□ -1.24
UBE2D3-204ENST00000349311 PTERQ96BW5 349 aa7.32□□□□□ -1.24
UBE2D3-204ENST00000349311 MVB12AQ96EY5 273 aa7.32□□□□□ -1.24
UBE2D3-204ENST00000349311 MSANTD3Q96H12 275 aa7.32□□□□□ -1.24
UBE2D3-204ENST00000349311 PIWIL1Q96J94 861 aaKnown RBP7.32□□□□□ -1.24
UBE2D3-204ENST00000349311 Q96MT0 163 aa7.32□□□□□ -1.24
UBE2D3-204ENST00000349311 ZNF583Q96ND8 569 aa7.32□□□□□ -1.24
UBE2D3-204ENST00000349311 TSGA13Q96PP4 275 aa7.32□□□□□ -1.24
UBE2D3-204ENST00000349311 ACOX2Q99424 681 aa7.32□□□□□ -1.24
UBE2D3-204ENST00000349311 KCNS3Q9BQ31 491 aa7.32□□□□□ -1.24
UBE2D3-204ENST00000349311 CHCHD6Q9BRQ6 235 aa7.32□□□□□ -1.24
UBE2D3-204ENST00000349311 BBS2Q9BXC9 721 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms