RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 JRKO75564 520 aa11.61□□□□□ -0.55
COL12A1-202ENST00000345356 SLC22A5O76082 557 aa11.61□□□□□ -0.55
COL12A1-202ENST00000345356 CELF2O95319 508 aaKnown RBP11.61□□□□□ -0.55
COL12A1-202ENST00000345356 AKR1A1P14550 325 aa11.61□□□□□ -0.55
COL12A1-202ENST00000345356 FOSL1P15407 271 aa11.61□□□□□ -0.55
COL12A1-202ENST00000345356 S100PP25815 95 aa11.61□□□□□ -0.55
COL12A1-202ENST00000345356 GIFP27352 417 aa11.61□□□□□ -0.55
COL12A1-202ENST00000345356 NKX6-1P78426 367 aaPredicted RBP11.61□□□□□ -0.55
COL12A1-202ENST00000345356 EN1Q05925 392 aaPredicted RBP11.61□□□□□ -0.55
COL12A1-202ENST00000345356 ZNF674Q2M3X9 581 aa11.61□□□□□ -0.55
COL12A1-202ENST00000345356 RAB6CQ53S08 254 aa11.61□□□□□ -0.55
COL12A1-202ENST00000345356 FAM72AQ5TYM5 149 aa11.61□□□□□ -0.55
COL12A1-202ENST00000345356 FAM72DQ6L9T8 149 aa11.61□□□□□ -0.55
COL12A1-202ENST00000345356 ALKAL2Q6UX46 152 aa11.61□□□□□ -0.55
COL12A1-202ENST00000345356 FAM72BQ86X60 149 aa11.61□□□□□ -0.55
COL12A1-202ENST00000345356 OR52E4Q8NGH9 312 aa11.61□□□□□ -0.55
COL12A1-202ENST00000345356 NR4A3Q92570 626 aa11.61□□□□□ -0.55
COL12A1-202ENST00000345356 SYT11Q9BT88 431 aa11.61□□□□□ -0.55
COL12A1-202ENST00000345356 RAB6CQ9H0N0 254 aa11.61□□□□□ -0.55
COL12A1-202ENST00000345356 NIPAL2Q9H841 368 aa11.61□□□□□ -0.55
COL12A1-202ENST00000345356 UTS2RQ9UKP6 389 aa11.61□□□□□ -0.55
COL12A1-202ENST00000345356 ERVW-1Q9UQF0 538 aa11.61□□□□□ -0.55
COL12A1-202ENST00000345356 TMEM131LA2VDJ0 1609 aa11.6□□□□□ -0.55
COL12A1-202ENST00000345356 UPK3BL1B0FP48 263 aa11.6□□□□□ -0.55
COL12A1-202ENST00000345356 UPK3BL2E5RIL1 263 aa11.6□□□□□ -0.55
COL12A1-202ENST00000345356 ADAP00813 363 aa11.6□□□□□ -0.55
COL12A1-202ENST00000345356 AMD1P17707 334 aa11.6□□□□□ -0.55
COL12A1-202ENST00000345356 RBMXP38159 391 aaKnown RBP11.6□□□□□ -0.55
COL12A1-202ENST00000345356 COMTD1Q86VU5 262 aa11.6□□□□□ -0.55
COL12A1-202ENST00000345356 IQCF1Q8N6M8 205 aa11.6□□□□□ -0.55
COL12A1-202ENST00000345356 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.6□□□□□ -0.55
COL12A1-202ENST00000345356 SLC22A8Q8TCC7 542 aa11.6□□□□□ -0.55
COL12A1-202ENST00000345356 KCNN1Q92952 543 aa11.6□□□□□ -0.55
COL12A1-202ENST00000345356 WRAP53Q9BUR4 548 aaKnown RBP11.6□□□□□ -0.55
COL12A1-202ENST00000345356 MARCH4Q9P2E8 410 aaPredicted RBP11.6□□□□□ -0.55
COL12A1-202ENST00000345356 DLGAP4Q9Y2H0 992 aa11.6□□□□□ -0.55
COL12A1-202ENST00000345356 A0A1B0GV50 99 aa11.6□□□□□ -0.55
COL12A1-202ENST00000345356 TOR1AO14656 332 aa11.6□□□□□ -0.55
COL12A1-202ENST00000345356 TREHO43280 583 aa11.6□□□□□ -0.55
COL12A1-202ENST00000345356 GABARAPO95166 117 aa11.6□□□□□ -0.55
COL12A1-202ENST00000345356 IFNA2P01563 188 aa11.6□□□□□ -0.55
COL12A1-202ENST00000345356 HLA-EP13747 358 aa11.6□□□□□ -0.55
COL12A1-202ENST00000345356 AQP2P41181 271 aa11.6□□□□□ -0.55
COL12A1-202ENST00000345356 MICAQ29983 383 aa11.6□□□□□ -0.55
COL12A1-202ENST00000345356 PRAMEF19Q5SWL8 479 aa11.6□□□□□ -0.55
COL12A1-202ENST00000345356 CXCL17Q6UXB2 119 aa11.6□□□□□ -0.55
COL12A1-202ENST00000345356 PBDC1Q9BVG4 233 aa11.6□□□□□ -0.55
COL12A1-202ENST00000345356 PTTG3PQ9NZH4 202 aa11.6□□□□□ -0.55
COL12A1-202ENST00000345356 SIX4Q9UIU6 781 aa11.6□□□□□ -0.55
COL12A1-202ENST00000345356 KIDINS220Q9ULH0 1771 aa11.6□□□□□ -0.55
COL12A1-202ENST00000345356 A8MUA0 341 aa11.6□□□□□ -0.55
COL12A1-202ENST00000345356 ANKRD66B4E2M5 251 aa11.6□□□□□ -0.55
COL12A1-202ENST00000345356 AKT2P31751 481 aa11.6□□□□□ -0.55
COL12A1-202ENST00000345356 FOXA1P55317 472 aa11.6□□□□□ -0.55
COL12A1-202ENST00000345356 CLDN8P56748 225 aa11.6□□□□□ -0.55
COL12A1-202ENST00000345356 ERVFC1P60507 584 aa11.6□□□□□ -0.55
COL12A1-202ENST00000345356 INCA1Q0VD86 236 aa11.6□□□□□ -0.55
COL12A1-202ENST00000345356 BATFQ16520 125 aa11.6□□□□□ -0.55
COL12A1-202ENST00000345356 RASGEF1AQ8N9B8 481 aa11.6□□□□□ -0.55
COL12A1-202ENST00000345356 SLC35B4Q969S0 331 aa11.6□□□□□ -0.55
COL12A1-202ENST00000345356 RELTQ969Z4 430 aa11.6□□□□□ -0.55
COL12A1-202ENST00000345356 C3orf49Q96BT1 292 aa11.6□□□□□ -0.55
COL12A1-202ENST00000345356 MRGPRX2Q96LB1 330 aa11.6□□□□□ -0.55
COL12A1-202ENST00000345356 FNIP2Q9P278 1114 aa11.6□□□□□ -0.55
COL12A1-202ENST00000345356 NEDD8-MDP1E9PL57 170 aa11.6□□□□□ -0.55
COL12A1-202ENST00000345356 SULT1C2O00338 296 aa11.6□□□□□ -0.55
COL12A1-202ENST00000345356 UQCRC2P22695 453 aa11.6□□□□□ -0.55
COL12A1-202ENST00000345356 GABRB3P28472 473 aa11.6□□□□□ -0.55
COL12A1-202ENST00000345356 HTR6P50406 440 aa11.6□□□□□ -0.55
COL12A1-202ENST00000345356 RRAS2P62070 204 aaPredicted RBP11.6□□□□□ -0.55
COL12A1-202ENST00000345356 VASH1Q7L8A9 365 aaPredicted RBP11.6□□□□□ -0.55
COL12A1-202ENST00000345356 TMCO2Q7Z6W1 182 aaPredicted RBP11.6□□□□□ -0.55
COL12A1-202ENST00000345356 RGMAQ96B86 450 aa11.6□□□□□ -0.55
COL12A1-202ENST00000345356 OR2M2Q96R28 347 aa11.6□□□□□ -0.55
COL12A1-202ENST00000345356 MCHR1Q99705 422 aa11.6□□□□□ -0.55
COL12A1-202ENST00000345356 PCBD2Q9H0N5 130 aa11.6□□□□□ -0.55
COL12A1-202ENST00000345356 GPR52Q9Y2T5 361 aa11.6□□□□□ -0.55
COL12A1-202ENST00000345356 A0A1W2PPL8 197 aa11.6□□□□□ -0.55
COL12A1-202ENST00000345356 E9PI62 339 aa11.6□□□□□ -0.55
COL12A1-202ENST00000345356 AGPAT2O15120 278 aa11.6□□□□□ -0.55
COL12A1-202ENST00000345356 SULT1C4O75897 302 aa11.6□□□□□ -0.55
COL12A1-202ENST00000345356 FDXRP22570 491 aa11.6□□□□□ -0.55
COL12A1-202ENST00000345356 SLC6A6P31641 620 aa11.6□□□□□ -0.55
COL12A1-202ENST00000345356 LUMP51884 338 aaPredicted RBP11.6□□□□□ -0.55
COL12A1-202ENST00000345356 LRRC26Q2I0M4 334 aa11.6□□□□□ -0.55
COL12A1-202ENST00000345356 ADPRMQ3LIE5 342 aa11.6□□□□□ -0.55
COL12A1-202ENST00000345356 UBXN11Q5T124 520 aa11.6□□□□□ -0.55
COL12A1-202ENST00000345356 LARP4Q71RC2 724 aaKnown RBP eCLIP11.6□□□□□ -0.55
COL12A1-202ENST00000345356 LAX1Q8IWV1 398 aa11.6□□□□□ -0.55
COL12A1-202ENST00000345356 SAMD14Q8IZD0 417 aaPredicted RBP11.6□□□□□ -0.55
COL12A1-202ENST00000345356 MAL2Q969L2 176 aa11.6□□□□□ -0.55
COL12A1-202ENST00000345356 IL12RB2Q99665 862 aa11.6□□□□□ -0.55
COL12A1-202ENST00000345356 ARPC5LQ9BPX5 153 aa11.6□□□□□ -0.55
COL12A1-202ENST00000345356 CENPMQ9NSP4 180 aa11.6□□□□□ -0.55
COL12A1-202ENST00000345356 TMEM5Q9Y2B1 443 aa11.6□□□□□ -0.55
COL12A1-202ENST00000345356 RAB19A4D1S5 217 aa11.59□□□□□ -0.55
COL12A1-202ENST00000345356 TRAPPC13A5PLN9 417 aa11.59□□□□□ -0.55
COL12A1-202ENST00000345356 ACOT8O14734 319 aa11.59□□□□□ -0.55
COL12A1-202ENST00000345356 ADAM23O75077 832 aa11.59□□□□□ -0.55
COL12A1-202ENST00000345356 TBX18O95935 607 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms