RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 ZFR2Q9UPR6 939 aaKnown RBP14.12□□□□□ -0.15
VIPAS39-202ENST00000343765 KLHL20Q9Y2M5 609 aa14.12□□□□□ -0.15
VIPAS39-202ENST00000343765 HEATR5BQ9P2D3 2071 aa14.12□□□□□ -0.15
VIPAS39-202ENST00000343765 TMEM247A6NEH6 219 aa14.12□□□□□ -0.15
VIPAS39-202ENST00000343765 ERAL1O75616 437 aaKnown RBP14.12□□□□□ -0.15
VIPAS39-202ENST00000343765 MFN2O95140 757 aa14.12□□□□□ -0.15
VIPAS39-202ENST00000343765 ADORA3P0DMS8 318 aa14.12□□□□□ -0.15
VIPAS39-202ENST00000343765 EN2P19622 333 aaPredicted RBP14.12□□□□□ -0.15
VIPAS39-202ENST00000343765 CD72P21854 359 aa14.12□□□□□ -0.15
VIPAS39-202ENST00000343765 PXNP49023 591 aaPredicted RBP14.12□□□□□ -0.15
VIPAS39-202ENST00000343765 PCBP4P57723 403 aaKnown RBP14.12□□□□□ -0.15
VIPAS39-202ENST00000343765 MAPK11Q15759 364 aa14.12□□□□□ -0.15
VIPAS39-202ENST00000343765 ZNF750Q32MQ0 723 aa14.12□□□□□ -0.15
VIPAS39-202ENST00000343765 COLEC12Q5KU26 742 aa14.12□□□□□ -0.15
VIPAS39-202ENST00000343765 NDUFAF5Q5TEU4 345 aa14.12□□□□□ -0.15
VIPAS39-202ENST00000343765 ZNF793Q6ZN11 406 aa14.12□□□□□ -0.15
VIPAS39-202ENST00000343765 PTCHD4Q6ZW05 846 aa14.12□□□□□ -0.15
VIPAS39-202ENST00000343765 LACC1Q8IV20 430 aa14.12□□□□□ -0.15
VIPAS39-202ENST00000343765 OR4D11Q8NGI4 311 aa14.12□□□□□ -0.15
VIPAS39-202ENST00000343765 BTBD2Q9BX70 525 aa14.12□□□□□ -0.15
VIPAS39-202ENST00000343765 SLIRPQ9GZT3 109 aaKnown RBP14.12□□□□□ -0.15
VIPAS39-202ENST00000343765 AICDAQ9GZX7 198 aa14.12□□□□□ -0.15
VIPAS39-202ENST00000343765 PCBD2Q9H0N5 130 aa14.12□□□□□ -0.15
VIPAS39-202ENST00000343765 SFXN1Q9H9B4 322 aa14.12□□□□□ -0.15
VIPAS39-202ENST00000343765 SEMA3GQ9NS98 782 aa14.12□□□□□ -0.15
VIPAS39-202ENST00000343765 PLCXD1Q9NUJ7 323 aa14.12□□□□□ -0.15
VIPAS39-202ENST00000343765 WBP1LQ9NX94 342 aa14.12□□□□□ -0.15
VIPAS39-202ENST00000343765 SEC14L3Q9UDX4 400 aa14.12□□□□□ -0.15
VIPAS39-202ENST00000343765 GPSM3Q9Y4H4 160 aa14.12□□□□□ -0.15
VIPAS39-202ENST00000343765 OR10H3O60404 316 aa14.11□□□□□ -0.15
VIPAS39-202ENST00000343765 DBTP11182 482 aaKnown RBP14.11□□□□□ -0.15
VIPAS39-202ENST00000343765 GRK5P34947 590 aa14.11□□□□□ -0.15
VIPAS39-202ENST00000343765 TIE1P35590 1138 aa14.11□□□□□ -0.15
VIPAS39-202ENST00000343765 HSD17B2P37059 387 aa14.11□□□□□ -0.15
VIPAS39-202ENST00000343765 UAP1L1Q3KQV9 507 aa14.11□□□□□ -0.15
VIPAS39-202ENST00000343765 OR4C11Q6IEV9 310 aa14.11□□□□□ -0.15
VIPAS39-202ENST00000343765 OR6Q1Q8NGQ2 317 aa14.11□□□□□ -0.15
VIPAS39-202ENST00000343765 FCGR1BQ92637 280 aa14.11□□□□□ -0.15
VIPAS39-202ENST00000343765 VMP1Q96GC9 406 aa14.11□□□□□ -0.15
VIPAS39-202ENST00000343765 CAMK1GQ96NX5 476 aa14.11□□□□□ -0.15
VIPAS39-202ENST00000343765 TEX101Q9BY14 249 aa14.11□□□□□ -0.15
VIPAS39-202ENST00000343765 OR51I1Q9H343 314 aa14.11□□□□□ -0.15
VIPAS39-202ENST00000343765 TMCC3Q9ULS5 477 aa14.11□□□□□ -0.15
VIPAS39-202ENST00000343765 FUOMA2VDF0 154 aa14.11□□□□□ -0.15
VIPAS39-202ENST00000343765 CLDN24A6NM45 220 aa14.11□□□□□ -0.15
VIPAS39-202ENST00000343765 M0R3H8 397 aa14.11□□□□□ -0.15
VIPAS39-202ENST00000343765 ADRA2AP08913 450 aa14.11□□□□□ -0.15
VIPAS39-202ENST00000343765 POU2F2P09086 479 aa14.11□□□□□ -0.15
VIPAS39-202ENST00000343765 HMGA2P52926 109 aa14.11□□□□□ -0.15
VIPAS39-202ENST00000343765 CRISP1P54107 249 aa14.11□□□□□ -0.15
VIPAS39-202ENST00000343765 IFITM3Q01628 133 aa14.11□□□□□ -0.15
VIPAS39-202ENST00000343765 TCTN3Q6NUS6 607 aa14.11□□□□□ -0.15
VIPAS39-202ENST00000343765 SLC30A8Q8IWU4 369 aa14.11□□□□□ -0.15
VIPAS39-202ENST00000343765 MFSD4AQ8N468 514 aa14.11□□□□□ -0.15
VIPAS39-202ENST00000343765 RAB42Q8N4Z0 105 aa14.11□□□□□ -0.15
VIPAS39-202ENST00000343765 ZNF513Q8N8E2 541 aaPredicted RBP14.11□□□□□ -0.15
VIPAS39-202ENST00000343765 DENND6BQ8NEG7 585 aa14.11□□□□□ -0.15
VIPAS39-202ENST00000343765 OR8K5Q8NH50 307 aa14.11□□□□□ -0.15
VIPAS39-202ENST00000343765 MCFD2Q8NI22 146 aa14.11□□□□□ -0.15
VIPAS39-202ENST00000343765 TREX2Q9BQ50 279 aaPredicted RBP14.11□□□□□ -0.15
VIPAS39-202ENST00000343765 OR51E2Q9H255 320 aa14.11□□□□□ -0.15
VIPAS39-202ENST00000343765 GLIPR2Q9H4G4 154 aa14.11□□□□□ -0.15
VIPAS39-202ENST00000343765 CTPS2Q9NRF8 586 aa14.11□□□□□ -0.15
VIPAS39-202ENST00000343765 ZCCHC3Q9NUD5 404 aaKnown RBP14.11□□□□□ -0.15
VIPAS39-202ENST00000343765 LMCD1Q9NZU5 365 aa14.11□□□□□ -0.15
VIPAS39-202ENST00000343765 FTSJ1Q9UET6 329 aa14.11□□□□□ -0.15
VIPAS39-202ENST00000343765 CKAP5Q14008 2032 aa14.11□□□□□ -0.15
VIPAS39-202ENST00000343765 PRAMEF27A3QJZ7 478 aa14.11□□□□□ -0.15
VIPAS39-202ENST00000343765 H3BN98 237 aa14.11□□□□□ -0.15
VIPAS39-202ENST00000343765 C8orf89P0DMQ9 161 aa14.11□□□□□ -0.15
VIPAS39-202ENST00000343765 NR2F1P10589 423 aa14.11□□□□□ -0.15
VIPAS39-202ENST00000343765 BCL6P41182 706 aa14.11□□□□□ -0.15
VIPAS39-202ENST00000343765 NCBP2P52298 156 aaKnown RBP eCLIP14.11□□□□□ -0.15
VIPAS39-202ENST00000343765 COMTD1Q86VU5 262 aa14.11□□□□□ -0.15
VIPAS39-202ENST00000343765 TP53I13Q8NBR0 393 aaPredicted RBP14.11□□□□□ -0.15
VIPAS39-202ENST00000343765 OR2A1Q8NGT9 310 aa14.11□□□□□ -0.15
VIPAS39-202ENST00000343765 OR14C36Q8NHC7 312 aa14.11□□□□□ -0.15
VIPAS39-202ENST00000343765 APOBEC4Q8WW27 367 aaKnown RBP14.11□□□□□ -0.15
VIPAS39-202ENST00000343765 SLC35G5Q96KT7 338 aa14.11□□□□□ -0.15
VIPAS39-202ENST00000343765 PHPT1Q9NRX4 125 aaPredicted RBP14.11□□□□□ -0.15
VIPAS39-202ENST00000343765 FKBP14Q9NWM8 211 aa14.11□□□□□ -0.15
VIPAS39-202ENST00000343765 ACSL5Q9ULC5 683 aa14.11□□□□□ -0.15
VIPAS39-202ENST00000343765 B3GNT3Q9Y2A9 372 aa14.11□□□□□ -0.15
VIPAS39-202ENST00000343765 A0A0C4DFX4 3053 aa14.1□□□□□ -0.15
VIPAS39-202ENST00000343765 A0A1W2PS29 197 aa14.1□□□□□ -0.15
VIPAS39-202ENST00000343765 C4orf51C9J302 202 aa14.1□□□□□ -0.15
VIPAS39-202ENST00000343765 ERI3O43414 337 aaKnown RBP14.1□□□□□ -0.15
VIPAS39-202ENST00000343765 RAB28P51157 221 aa14.1□□□□□ -0.15
VIPAS39-202ENST00000343765 PRDX1Q06830 199 aaKnown RBP14.1□□□□□ -0.15
VIPAS39-202ENST00000343765 SGCGQ13326 291 aa14.1□□□□□ -0.15
VIPAS39-202ENST00000343765 PIN1Q13526 163 aaPredicted RBP14.1□□□□□ -0.15
VIPAS39-202ENST00000343765 MED22Q15528 200 aa14.1□□□□□ -0.15
VIPAS39-202ENST00000343765 C2orf27AQ580R0 203 aa14.1□□□□□ -0.15
VIPAS39-202ENST00000343765 ARMCX4Q5H9R4 360 aa14.1□□□□□ -0.15
VIPAS39-202ENST00000343765 FRMPD2BQ6IN97 320 aa14.1□□□□□ -0.15
VIPAS39-202ENST00000343765 ZNF770Q6IQ21 691 aaPredicted RBP14.1□□□□□ -0.15
VIPAS39-202ENST00000343765 CLIP4Q8N3C7 705 aa14.1□□□□□ -0.15
VIPAS39-202ENST00000343765 CREB3L4Q8TEY5 395 aa14.1□□□□□ -0.15
VIPAS39-202ENST00000343765 S100ZQ8WXG8 99 aa14.1□□□□□ -0.15
VIPAS39-202ENST00000343765 BBS4Q96RK4 519 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms