RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 MRPL10Q7Z7H8 261 aaKnown RBP14.36□□□□□ -0.11
UBE3B-202ENST00000342494 GALNT15Q8N3T1 639 aa14.36□□□□□ -0.11
UBE3B-202ENST00000342494 ANKLE1Q8NAG6 615 aa14.36□□□□□ -0.11
UBE3B-202ENST00000342494 OR2T33Q8NG76 320 aa14.36□□□□□ -0.11
UBE3B-202ENST00000342494 OR10A4Q9H209 315 aa14.36□□□□□ -0.11
UBE3B-202ENST00000342494 PCDH10Q9P2E7 1040 aa14.36□□□□□ -0.11
UBE3B-202ENST00000342494 PCDHGB6Q9Y5F9 930 aa14.36□□□□□ -0.11
UBE3B-202ENST00000342494 NLGN4YQ8NFZ3 816 aaPredicted RBP14.36□□□□□ -0.11
UBE3B-202ENST00000342494 THAP4Q8WY91 577 aa14.36□□□□□ -0.11
UBE3B-202ENST00000342494 AURKBQ96GD4 344 aaPredicted RBP14.36□□□□□ -0.11
UBE3B-202ENST00000342494 MAP3K3Q99759 626 aa14.36□□□□□ -0.11
UBE3B-202ENST00000342494 EURLQ9NYK6 297 aa14.36□□□□□ -0.11
UBE3B-202ENST00000342494 SCAPQ12770 1279 aa14.36□□□□□ -0.11
UBE3B-202ENST00000342494 RPL13AP3Q6NVV1 102 aa14.36□□□□□ -0.11
UBE3B-202ENST00000342494 LARP4Q71RC2 724 aaKnown RBP eCLIP14.36□□□□□ -0.11
UBE3B-202ENST00000342494 KLHDC8AQ8IYD2 350 aa14.36□□□□□ -0.11
UBE3B-202ENST00000342494 ZNF440Q8IYI8 595 aa14.36□□□□□ -0.11
UBE3B-202ENST00000342494 BMFQ96LC9 184 aa14.36□□□□□ -0.11
UBE3B-202ENST00000342494 EPHA6Q9UF33 1036 aa14.36□□□□□ -0.11
UBE3B-202ENST00000342494 IGKV6-21A0A0C4DH24 114 aa14.36□□□□□ -0.11
UBE3B-202ENST00000342494 DISC1C4P0D8 188 aa14.36□□□□□ -0.11
UBE3B-202ENST00000342494 AOC1P19801 751 aa14.36□□□□□ -0.11
UBE3B-202ENST00000342494 ADAM15Q13444 863 aa14.36□□□□□ -0.11
UBE3B-202ENST00000342494 TECRLQ5HYJ1 363 aa14.36□□□□□ -0.11
UBE3B-202ENST00000342494 MEDAGQ5VYS4 303 aa14.36□□□□□ -0.11
UBE3B-202ENST00000342494 C6orf120Q7Z4R8 191 aa14.36□□□□□ -0.11
UBE3B-202ENST00000342494 HMGN2P46Q86SG4 172 aa14.36□□□□□ -0.11
UBE3B-202ENST00000342494 ZNF554Q86TJ5 538 aa14.36□□□□□ -0.11
UBE3B-202ENST00000342494 TTC9BQ8N6N2 239 aa14.36□□□□□ -0.11
UBE3B-202ENST00000342494 VNN2O95498 520 aa14.35□□□□□ -0.11
UBE3B-202ENST00000342494 ERCC1P07992 297 aaPredicted RBP14.35□□□□□ -0.11
UBE3B-202ENST00000342494 CEBPBP17676 345 aa14.35□□□□□ -0.11
UBE3B-202ENST00000342494 ACADVLP49748 655 aa14.35□□□□□ -0.11
UBE3B-202ENST00000342494 HSD11B2P80365 405 aa14.35□□□□□ -0.11
UBE3B-202ENST00000342494 COL9A2Q14055 689 aaPredicted RBP14.35□□□□□ -0.11
UBE3B-202ENST00000342494 DEFB133Q30KQ1 61 aa14.35□□□□□ -0.11
UBE3B-202ENST00000342494 HUS1BQ8NHY5 278 aa14.35□□□□□ -0.11
UBE3B-202ENST00000342494 SCRN2Q96FV2 425 aa14.35□□□□□ -0.11
UBE3B-202ENST00000342494 MSLNLQ96KJ4 702 aa14.35□□□□□ -0.11
UBE3B-202ENST00000342494 HS6ST2Q96MM7 605 aa14.35□□□□□ -0.11
UBE3B-202ENST00000342494 ZNF700Q9H0M5 742 aa14.35□□□□□ -0.11
UBE3B-202ENST00000342494 KCNS2Q9ULS6 477 aa14.35□□□□□ -0.11
UBE3B-202ENST00000342494 PDE4DIPQ5VU43 2346 aa14.35□□□□□ -0.11
UBE3B-202ENST00000342494 FTCDNL1E5RQL4 147 aa14.35□□□□□ -0.11
UBE3B-202ENST00000342494 ARSAP15289 507 aa14.35□□□□□ -0.11
UBE3B-202ENST00000342494 PRKCAP17252 672 aa14.35□□□□□ -0.11
UBE3B-202ENST00000342494 FOLR3P41439 243 aa14.35□□□□□ -0.11
UBE3B-202ENST00000342494 RHDQ02161 417 aa14.35□□□□□ -0.11
UBE3B-202ENST00000342494 CRYZQ08257 329 aaKnown RBP14.35□□□□□ -0.11
UBE3B-202ENST00000342494 ABRAXAS2Q15018 415 aa14.35□□□□□ -0.11
UBE3B-202ENST00000342494 UGT3A2Q3SY77 523 aa14.35□□□□□ -0.11
UBE3B-202ENST00000342494 SLC27A4Q6P1M0 643 aa14.35□□□□□ -0.11
UBE3B-202ENST00000342494 ERMP1Q7Z2K6 904 aa14.35□□□□□ -0.11
UBE3B-202ENST00000342494 SGTBQ96EQ0 304 aa14.35□□□□□ -0.11
UBE3B-202ENST00000342494 ZFYVE21Q9BQ24 234 aa14.35□□□□□ -0.11
UBE3B-202ENST00000342494 HCFC1R1Q9NWW0 138 aa14.35□□□□□ -0.11
UBE3B-202ENST00000342494 MARCH4Q9P2E8 410 aaPredicted RBP14.35□□□□□ -0.11
UBE3B-202ENST00000342494 SARDHQ9UL12 918 aa14.35□□□□□ -0.11
UBE3B-202ENST00000342494 C13orf42A0A1B0GVH6 325 aa14.35□□□□□ -0.11
UBE3B-202ENST00000342494 M0QZQ0 153 aa14.35□□□□□ -0.11
UBE3B-202ENST00000342494 FLRT2O43155 660 aa14.35□□□□□ -0.11
UBE3B-202ENST00000342494 ATE1O95260 518 aa14.35□□□□□ -0.11
UBE3B-202ENST00000342494 PPP1R3AQ16821 1122 aa14.35□□□□□ -0.11
UBE3B-202ENST00000342494 ATG9BQ674R7 924 aa14.35□□□□□ -0.11
UBE3B-202ENST00000342494 PHOSPHO2Q8TCD6 241 aa14.35□□□□□ -0.11
UBE3B-202ENST00000342494 SRA1Q9HD15 236 aaKnown RBP14.35□□□□□ -0.11
UBE3B-202ENST00000342494 NOP16Q9Y3C1 178 aaKnown RBP14.35□□□□□ -0.11
UBE3B-202ENST00000342494 FAAHO00519 579 aa14.35□□□□□ -0.11
UBE3B-202ENST00000342494 E2F3O00716 465 aa14.35□□□□□ -0.11
UBE3B-202ENST00000342494 POLR1CO15160 346 aaPredicted RBP14.35□□□□□ -0.11
UBE3B-202ENST00000342494 BTBD16Q32M84 506 aa14.35□□□□□ -0.11
UBE3B-202ENST00000342494 Q6ZSR6 202 aa14.35□□□□□ -0.11
UBE3B-202ENST00000342494 LAS2Q8IYD9 372 aa14.35□□□□□ -0.11
UBE3B-202ENST00000342494 THAP6Q8TBB0 222 aa14.35□□□□□ -0.11
UBE3B-202ENST00000342494 FUZQ9BT04 418 aa14.35□□□□□ -0.11
UBE3B-202ENST00000342494 CRB3Q9BUF7 120 aa14.35□□□□□ -0.11
UBE3B-202ENST00000342494 SOCS2O14508 198 aa14.34□□□□□ -0.11
UBE3B-202ENST00000342494 MSX1P28360 303 aa14.34□□□□□ -0.11
UBE3B-202ENST00000342494 DEFB103AP81534 67 aa14.34□□□□□ -0.11
UBE3B-202ENST00000342494 NANOGP8Q6NSW7 305 aa14.34□□□□□ -0.11
UBE3B-202ENST00000342494 UBE2Q1Q7Z7E8 422 aa14.34□□□□□ -0.11
UBE3B-202ENST00000342494 SLC39A11Q8N1S5 342 aa14.34□□□□□ -0.11
UBE3B-202ENST00000342494 NANOGQ9H9S0 305 aa14.34□□□□□ -0.11
UBE3B-202ENST00000342494 ZNF224Q9NZL3 707 aa14.34□□□□□ -0.11
UBE3B-202ENST00000342494 CLEC4EQ9ULY5 219 aa14.34□□□□□ -0.11
UBE3B-202ENST00000342494 DPP6P42658 865 aa14.34□□□□□ -0.11
UBE3B-202ENST00000342494 NIPAL4Q0D2K0 466 aa14.34□□□□□ -0.11
UBE3B-202ENST00000342494 WDTC1Q8N5D0 677 aa14.34□□□□□ -0.11
UBE3B-202ENST00000342494 OR8J3Q8NGG0 315 aa14.34□□□□□ -0.11
UBE3B-202ENST00000342494 PROKR1Q8TCW9 393 aa14.34□□□□□ -0.11
UBE3B-202ENST00000342494 PKP2Q99959 881 aa14.34□□□□□ -0.11
UBE3B-202ENST00000342494 DPAGT1Q9H3H5 408 aa14.34□□□□□ -0.11
UBE3B-202ENST00000342494 TMEM14AQ9Y6G1 99 aa14.34□□□□□ -0.11
UBE3B-202ENST00000342494 HOXB9P17482 250 aaPredicted RBP14.34□□□□□ -0.11
UBE3B-202ENST00000342494 TNFRSF4P43489 277 aa14.34□□□□□ -0.11
UBE3B-202ENST00000342494 BLMHQ13867 455 aa14.34□□□□□ -0.11
UBE3B-202ENST00000342494 LRFN4Q6PJG9 635 aa14.34□□□□□ -0.11
UBE3B-202ENST00000342494 SLC15A3Q8IY34 581 aa14.34□□□□□ -0.11
UBE3B-202ENST00000342494 PSD4Q8NDX1 1056 aa14.34□□□□□ -0.11
UBE3B-202ENST00000342494 ELP5Q8TE02 316 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms