RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 WDR47O94967 919 aa14.37□□□□□ -0.11
BRAT1-201ENST00000340611 ANGPTL1O95841 491 aa14.37□□□□□ -0.11
BRAT1-201ENST00000340611 CSF2P04141 144 aa14.37□□□□□ -0.11
BRAT1-201ENST00000340611 HIST1H2AGP0C0S8 130 aaPredicted RBP14.37□□□□□ -0.11
BRAT1-201ENST00000340611 CBSLP0DN79 551 aa14.37□□□□□ -0.11
BRAT1-201ENST00000340611 HIST1H2ADP20671 130 aa14.37□□□□□ -0.11
BRAT1-201ENST00000340611 CBSP35520 551 aa14.37□□□□□ -0.11
BRAT1-201ENST00000340611 CDK5R2Q13319 367 aa14.37□□□□□ -0.11
BRAT1-201ENST00000340611 XKR7Q5GH72 579 aa14.37□□□□□ -0.11
BRAT1-201ENST00000340611 ARMC4Q5T2S8 1044 aa14.37□□□□□ -0.11
BRAT1-201ENST00000340611 ENPP7Q6UWV6 458 aa14.37□□□□□ -0.11
BRAT1-201ENST00000340611 LRRTM4Q86VH4 590 aa14.37□□□□□ -0.11
BRAT1-201ENST00000340611 OR2T12Q8NG77 320 aa14.37□□□□□ -0.11
BRAT1-201ENST00000340611 HIST1H2AHQ96KK5 128 aa14.37□□□□□ -0.11
BRAT1-201ENST00000340611 HIST1H2AJQ99878 128 aa14.37□□□□□ -0.11
BRAT1-201ENST00000340611 H2AFJQ9BTM1 129 aa14.37□□□□□ -0.11
BRAT1-201ENST00000340611 CD244Q9BZW8 370 aa14.37□□□□□ -0.11
BRAT1-201ENST00000340611 IKZF5Q9H5V7 419 aa14.37□□□□□ -0.11
BRAT1-201ENST00000340611 SLC23A1Q9UHI7 598 aa14.37□□□□□ -0.11
BRAT1-201ENST00000340611 FZD4Q9ULV1 537 aa14.37□□□□□ -0.11
BRAT1-201ENST00000340611 SNX8Q9Y5X2 465 aa14.37□□□□□ -0.11
BRAT1-201ENST00000340611 OR2B3O76000 313 aa14.36□□□□□ -0.11
BRAT1-201ENST00000340611 MED26O95402 600 aa14.36□□□□□ -0.11
BRAT1-201ENST00000340611 HPRP00739 348 aa14.36□□□□□ -0.11
BRAT1-201ENST00000340611 ANXA5P08758 320 aa14.36□□□□□ -0.11
BRAT1-201ENST00000340611 EPORP19235 508 aa14.36□□□□□ -0.11
BRAT1-201ENST00000340611 AK4P27144 223 aaPredicted RBP14.36□□□□□ -0.11
BRAT1-201ENST00000340611 SLC15A1P46059 708 aa14.36□□□□□ -0.11
BRAT1-201ENST00000340611 FAPQ12884 760 aa14.36□□□□□ -0.11
BRAT1-201ENST00000340611 GALEQ14376 348 aa14.36□□□□□ -0.11
BRAT1-201ENST00000340611 IRF3Q14653 427 aa14.36□□□□□ -0.11
BRAT1-201ENST00000340611 SUSD1Q6UWL2 747 aa14.36□□□□□ -0.11
BRAT1-201ENST00000340611 CFAP77Q6ZQR2 320 aa14.36□□□□□ -0.11
BRAT1-201ENST00000340611 Q6ZSR9 355 aa14.36□□□□□ -0.11
BRAT1-201ENST00000340611 USP30Q70CQ3 517 aa14.36□□□□□ -0.11
BRAT1-201ENST00000340611 LILRB2Q8N423 598 aa14.36□□□□□ -0.11
BRAT1-201ENST00000340611 ANKRD53Q8N9V6 530 aa14.36□□□□□ -0.11
BRAT1-201ENST00000340611 VANGL1Q8TAA9 524 aaPredicted RBP14.36□□□□□ -0.11
BRAT1-201ENST00000340611 NCLNQ969V3 563 aa14.36□□□□□ -0.11
BRAT1-201ENST00000340611 FAM162AQ96A26 154 aa14.36□□□□□ -0.11
BRAT1-201ENST00000340611 TRNT1Q96Q11 434 aaKnown RBP14.36□□□□□ -0.11
BRAT1-201ENST00000340611 PKP4Q99569 1192 aa14.36□□□□□ -0.11
BRAT1-201ENST00000340611 CDADC1Q9BWV3 514 aa14.36□□□□□ -0.11
BRAT1-201ENST00000340611 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.36□□□□□ -0.11
BRAT1-201ENST00000340611 LIN7BQ9HAP6 207 aa14.36□□□□□ -0.11
BRAT1-201ENST00000340611 PHPT1Q9NRX4 125 aaPredicted RBP14.36□□□□□ -0.11
BRAT1-201ENST00000340611 OR52A4PA6NMU1 304 aa14.36□□□□□ -0.11
BRAT1-201ENST00000340611 BCKDKO14874 412 aa14.36□□□□□ -0.11
BRAT1-201ENST00000340611 PRAMEF4O60810 478 aa14.36□□□□□ -0.11
BRAT1-201ENST00000340611 CD6P30203 668 aa14.36□□□□□ -0.11
BRAT1-201ENST00000340611 ETV1P50549 477 aa14.36□□□□□ -0.11
BRAT1-201ENST00000340611 CLCNKAP51800 687 aa14.36□□□□□ -0.11
BRAT1-201ENST00000340611 GPR50Q13585 617 aa14.36□□□□□ -0.11
BRAT1-201ENST00000340611 CLCA4Q14CN2 919 aa14.36□□□□□ -0.11
BRAT1-201ENST00000340611 SMN1Q16637 294 aaKnown RBP14.36□□□□□ -0.11
BRAT1-201ENST00000340611 PRAMEF9Q5VWM5 478 aa14.36□□□□□ -0.11
BRAT1-201ENST00000340611 LAIR1Q6GTX8 287 aa14.36□□□□□ -0.11
BRAT1-201ENST00000340611 TSSK4Q6SA08 328 aa14.36□□□□□ -0.11
BRAT1-201ENST00000340611 SYT13Q7L8C5 426 aa14.36□□□□□ -0.11
BRAT1-201ENST00000340611 OR2L2Q8NH16 312 aa14.36□□□□□ -0.11
BRAT1-201ENST00000340611 SLC7A6Q92536 515 aa14.36□□□□□ -0.11
BRAT1-201ENST00000340611 REXO5Q96IC2 774 aaKnown RBP14.36□□□□□ -0.11
BRAT1-201ENST00000340611 RBM4BQ9BQ04 359 aaKnown RBP14.36□□□□□ -0.11
BRAT1-201ENST00000340611 RBM4Q9BWF3 364 aaKnown RBP14.36□□□□□ -0.11
BRAT1-201ENST00000340611 UGT2B28Q9BY64 529 aa14.36□□□□□ -0.11
BRAT1-201ENST00000340611 ACTL8Q9H568 366 aa14.36□□□□□ -0.11
BRAT1-201ENST00000340611 NPAP1Q9NZP6 1156 aa14.36□□□□□ -0.11
BRAT1-201ENST00000340611 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.36□□□□□ -0.11
BRAT1-201ENST00000340611 OSGIN1Q9UJX0 560 aa14.36□□□□□ -0.11
BRAT1-201ENST00000340611 POLR3HQ9Y535 204 aaPredicted RBP14.36□□□□□ -0.11
BRAT1-201ENST00000340611 KCNE2Q9Y6J6 123 aa14.36□□□□□ -0.11
BRAT1-201ENST00000340611 SPAG17Q6Q759 2223 aa14.36□□□□□ -0.11
BRAT1-201ENST00000340611 MGAT4DA6NG13 374 aa14.35□□□□□ -0.11
BRAT1-201ENST00000340611 HMX3A6NHT5 357 aa14.35□□□□□ -0.11
BRAT1-201ENST00000340611 LOC110117498-PIK3R3F6TDL0 507 aa14.35□□□□□ -0.11
BRAT1-201ENST00000340611 VEGFDO43915 354 aa14.35□□□□□ -0.11
BRAT1-201ENST00000340611 SH3BGRLO75368 114 aa14.35□□□□□ -0.11
BRAT1-201ENST00000340611 STK16O75716 305 aa14.35□□□□□ -0.11
BRAT1-201ENST00000340611 LCKP06239 509 aa14.35□□□□□ -0.11
BRAT1-201ENST00000340611 IGHV4-34P06331 123 aa14.35□□□□□ -0.11
BRAT1-201ENST00000340611 FCER2P06734 321 aa14.35□□□□□ -0.11
BRAT1-201ENST00000340611 UROSP10746 265 aa14.35□□□□□ -0.11
BRAT1-201ENST00000340611 MASP1P48740 699 aa14.35□□□□□ -0.11
BRAT1-201ENST00000340611 MTAPQ13126 283 aa14.35□□□□□ -0.11
BRAT1-201ENST00000340611 NAE1Q13564 534 aa14.35□□□□□ -0.11
BRAT1-201ENST00000340611 ZNF691Q5VV52 312 aa14.35□□□□□ -0.11
BRAT1-201ENST00000340611 GPRIN3Q6ZVF9 776 aa14.35□□□□□ -0.11
BRAT1-201ENST00000340611 SFTPA2Q8IWL1 248 aa14.35□□□□□ -0.11
BRAT1-201ENST00000340611 YIPF7Q8N8F6 280 aa14.35□□□□□ -0.11
BRAT1-201ENST00000340611 PJA1Q8NG27 643 aa14.35□□□□□ -0.11
BRAT1-201ENST00000340611 CDC26Q8NHZ8 85 aa14.35□□□□□ -0.11
BRAT1-201ENST00000340611 AKAP1Q92667 903 aaKnown RBP eCLIP14.35□□□□□ -0.11
BRAT1-201ENST00000340611 ZIM2Q9NZV7 527 aa14.35□□□□□ -0.11
BRAT1-201ENST00000340611 CYB5R1Q9UHQ9 305 aa14.35□□□□□ -0.11
BRAT1-201ENST00000340611 GMEB2Q9UKD1 530 aa14.35□□□□□ -0.11
BRAT1-201ENST00000340611 DIMT1Q9UNQ2 313 aaKnown RBP14.35□□□□□ -0.11
BRAT1-201ENST00000340611 ASF1AQ9Y294 204 aa14.35□□□□□ -0.11
BRAT1-201ENST00000340611 DCTP40126 519 aa14.35□□□□□ -0.11
BRAT1-201ENST00000340611 KRR1Q13601 381 aaKnown RBP14.35□□□□□ -0.11
BRAT1-201ENST00000340611 CPSF6Q16630 551 aaKnown RBP eCLIP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms