RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 PDSS1Q5T2R2 415 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 NRROSQ86YC3 692 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 PACRGLQ8N7B6 248 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 PLD5Q8N7P1 536 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 LIPHQ8WWY8 451 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 TAAR8Q969N4 342 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 PRMT6Q96LA8 375 aaPredicted RBP12.35□□□□□ -0.43
USP47-202ENST00000339865 LMF1Q96S06 567 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 OCSTAMPQ9BR26 566 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 WDR26Q9H7D7 661 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 PCDHA2Q9Y5H9 948 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 MYO5BQ9ULV0 1848 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 POM121CA8CG34 1229 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 TGM4P49221 684 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 ERVK-16P61578 105 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 ITPRIPL2Q3MIP1 535 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 MEX3BQ6ZN04 569 aaKnown RBP12.35□□□□□ -0.43
USP47-202ENST00000339865 BAGE3Q86Y29 109 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 BAGE2Q86Y30 109 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.35□□□□□ -0.432e-8■■■■■ 29.1
USP47-202ENST00000339865 PLEKHO2Q8TD55 490 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 GNPDA2Q8TDQ7 276 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 ZFAND2BQ8WV99 257 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 NR4A3Q92570 626 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 LRRIQ1Q96JM4 1722 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 PITX2Q99697 317 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 CFAP20Q9Y6A4 193 aaKnown RBP12.35□□□□□ -0.43
USP47-202ENST00000339865 A6NHS1 94 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 B4DGG1 531 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 CHEK1O14757 476 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 SLC31A2O15432 143 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 M6PRP20645 277 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 RFC2P35250 354 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 AWAT2Q6E213 333 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 PLEKHG7Q6ZR37 379 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 SVBPQ8N300 66 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 WDR20Q8TBZ3 569 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 NTAN1Q96AB6 310 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 SHDQ96IW2 340 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 CGREF1Q99674 301 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 ZNF436Q9C0F3 470 aaPredicted RBP12.35□□□□□ -0.43
USP47-202ENST00000339865 SLC22A14Q9Y267 594 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 ERI3O43414 337 aaKnown RBP12.35□□□□□ -0.43
USP47-202ENST00000339865 BMXP51813 675 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 ACTR1AP61163 376 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 GALNT1Q10472 559 aaPredicted RBP12.35□□□□□ -0.43
USP47-202ENST00000339865 TAF10Q12962 218 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 NKPD1Q17RQ9 610 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 AGAP7PQ5VUJ5 663 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 AGAP6Q5VW22 663 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 CXCL17Q6UXB2 119 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 ZNF662Q6ZS27 426 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 CCDC71LQ8N9Z2 235 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 AGAP4Q96P64 663 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 RBP7Q96R05 134 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 NELL2Q99435 816 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 POLDIP3Q9BY77 421 aaKnown RBP12.35□□□□□ -0.43
USP47-202ENST00000339865 TMEM134Q9H6X4 195 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 DOCK7Q96N67 2140 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 F5H5P2 479 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 IL32P24001 234 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 CHRNB4P30926 498 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 GGT5P36269 586 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 RNF144AP50876 292 aaPredicted RBP12.35□□□□□ -0.43
USP47-202ENST00000339865 RSC1A1Q92681 617 aa12.35□□□□□ -0.43
USP47-202ENST00000339865 SAMD9Q5K651 1589 aa12.34□□□□□ -0.43
USP47-202ENST00000339865 FSCN2O14926 492 aa12.34□□□□□ -0.43
USP47-202ENST00000339865 SCO1O75880 301 aa12.34□□□□□ -0.43
USP47-202ENST00000339865 MT-ND2P03891 347 aa12.34□□□□□ -0.43
USP47-202ENST00000339865 PBX2P40425 430 aa12.34□□□□□ -0.43
USP47-202ENST00000339865 TRAM1L1Q8N609 369 aa12.34□□□□□ -0.43
USP47-202ENST00000339865 APMAPQ9HDC9 416 aa12.34□□□□□ -0.43
USP47-202ENST00000339865 TMX2Q9Y320 296 aa12.34□□□□□ -0.43
USP47-202ENST00000339865 LRP5LA4QPB2 252 aa12.34□□□□□ -0.43
USP47-202ENST00000339865 EFCAB7A8K855 629 aa12.34□□□□□ -0.43
USP47-202ENST00000339865 SOCS2O14508 198 aa12.34□□□□□ -0.43
USP47-202ENST00000339865 ONECUT3O60422 494 aaPredicted RBP12.34□□□□□ -0.43
USP47-202ENST00000339865 PTGER3P43115 390 aa12.34□□□□□ -0.43
USP47-202ENST00000339865 MMABQ96EY8 250 aaPredicted RBP12.34□□□□□ -0.43
USP47-202ENST00000339865 HSH2DQ96JZ2 352 aa12.34□□□□□ -0.43
USP47-202ENST00000339865 PINK1Q9BXM7 581 aa12.34□□□□□ -0.43
USP47-202ENST00000339865 TSPAN10Q9H1Z9 355 aaPredicted RBP12.34□□□□□ -0.43
USP47-202ENST00000339865 ZFP37Q9Y6Q3 630 aaPredicted RBP12.34□□□□□ -0.43
USP47-202ENST00000339865 SLC7A4O43246 635 aa12.34□□□□□ -0.43
USP47-202ENST00000339865 OXTRP30559 389 aa12.34□□□□□ -0.43
USP47-202ENST00000339865 GRIN2CQ14957 1233 aa12.34□□□□□ -0.43
USP47-202ENST00000339865 PCGF3Q3KNV8 242 aa12.34□□□□□ -0.43
USP47-202ENST00000339865 CYBRD1Q53TN4 286 aa12.34□□□□□ -0.43
USP47-202ENST00000339865 RAB41Q5JT25 222 aa12.34□□□□□ -0.43
USP47-202ENST00000339865 NLGN4XQ8N0W4 816 aa12.34□□□□□ -0.43
USP47-202ENST00000339865 TSTD1Q8NFU3 115 aa12.34□□□□□ -0.43
USP47-202ENST00000339865 HERVK_113Q902F9 699 aa12.34□□□□□ -0.43
USP47-202ENST00000339865 TPPP3Q9BW30 176 aa12.34□□□□□ -0.43
USP47-202ENST00000339865 TCRBV7S2A1N4TA0A589 114 aa12.34□□□□□ -0.43
USP47-202ENST00000339865 B4GAT1O43505 415 aa12.34□□□□□ -0.43
USP47-202ENST00000339865 C8orf89P0DMQ9 161 aa12.34□□□□□ -0.43
USP47-202ENST00000339865 PTPRRQ15256 657 aa12.34□□□□□ -0.43
USP47-202ENST00000339865 RNASE10Q5GAN6 216 aaKnown RBP12.34□□□□□ -0.43
USP47-202ENST00000339865 BAIAP2L2Q6UXY1 529 aa12.34□□□□□ -0.43
USP47-202ENST00000339865 KLBQ86Z14 1044 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms