RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 LASP1Q14847 261 aaKnown RBP3.16□□□□□ -1.9
CSMD3-202ENST00000339701 ETFRF1Q6IPR1 90 aa3.16□□□□□ -1.9
CSMD3-202ENST00000339701 C15orf39Q6ZRI6 1047 aa3.16□□□□□ -1.9
CSMD3-202ENST00000339701 AMIGO1Q86WK6 493 aa3.16□□□□□ -1.9
CSMD3-202ENST00000339701 FAM109AQ8N4B1 249 aa3.16□□□□□ -1.9
CSMD3-202ENST00000339701 KCNRGQ8N5I3 272 aa3.16□□□□□ -1.9
CSMD3-202ENST00000339701 NIPA2Q8N8Q9 360 aa3.16□□□□□ -1.9
CSMD3-202ENST00000339701 BEST4Q8NFU0 473 aa3.16□□□□□ -1.9
CSMD3-202ENST00000339701 SHC3Q92529 594 aa3.16□□□□□ -1.9
CSMD3-202ENST00000339701 C12orf42Q96LP6 360 aa3.16□□□□□ -1.9
CSMD3-202ENST00000339701 PCDH12Q9NPG4 1184 aa3.16□□□□□ -1.9
CSMD3-202ENST00000339701 SNTG1Q9NSN8 517 aa3.16□□□□□ -1.9
CSMD3-202ENST00000339701 ASF1AQ9Y294 204 aa3.16□□□□□ -1.9
CSMD3-202ENST00000339701 ZFC3H1O60293 1989 aaKnown RBP3.16□□□□□ -1.9
CSMD3-202ENST00000339701 CACNA1HO95180 2353 aa3.16□□□□□ -1.9
CSMD3-202ENST00000339701 ARL5CA6NH57 179 aa3.16□□□□□ -1.9
CSMD3-202ENST00000339701 OR6C65A6NJZ3 312 aa3.16□□□□□ -1.9
CSMD3-202ENST00000339701 SLC38A8A6NNN8 435 aa3.16□□□□□ -1.9
CSMD3-202ENST00000339701 EGFP01133 1207 aa3.16□□□□□ -1.9
CSMD3-202ENST00000339701 STAG3L3P0CL85 134 aa3.16□□□□□ -1.9
CSMD3-202ENST00000339701 GIMD1P0DJR0 217 aa3.16□□□□□ -1.9
CSMD3-202ENST00000339701 PRKCAP17252 672 aa3.16□□□□□ -1.9
CSMD3-202ENST00000339701 ARF4P18085 180 aaPredicted RBP3.16□□□□□ -1.9
CSMD3-202ENST00000339701 BMI1P35226 326 aa3.16□□□□□ -1.9
CSMD3-202ENST00000339701 ETV1P50549 477 aa3.16□□□□□ -1.9
CSMD3-202ENST00000339701 SUB1P53999 127 aaKnown RBP eCLIP3.16□□□□□ -1.9
CSMD3-202ENST00000339701 MADCAM1Q13477 382 aa3.16□□□□□ -1.9
CSMD3-202ENST00000339701 RAB35Q15286 201 aa3.16□□□□□ -1.9
CSMD3-202ENST00000339701 RSPO4Q2I0M5 234 aaPredicted RBP3.16□□□□□ -1.9
CSMD3-202ENST00000339701 C3orf38Q5JPI3 329 aa3.16□□□□□ -1.9
CSMD3-202ENST00000339701 AADACL4Q5VUY2 407 aa3.16□□□□□ -1.9
CSMD3-202ENST00000339701 USP49Q70CQ1 688 aa3.16□□□□□ -1.9
CSMD3-202ENST00000339701 SLC16A9Q7RTY1 509 aa3.16□□□□□ -1.9
CSMD3-202ENST00000339701 GLT6D1Q7Z4J2 308 aa3.16□□□□□ -1.9
CSMD3-202ENST00000339701 KLHL36Q8N4N3 616 aa3.16□□□□□ -1.9
CSMD3-202ENST00000339701 OR8J3Q8NGG0 315 aa3.16□□□□□ -1.9
CSMD3-202ENST00000339701 OR9A4Q8NGU2 314 aa3.16□□□□□ -1.9
CSMD3-202ENST00000339701 SPRYD4Q8WW59 207 aaPredicted RBP3.16□□□□□ -1.9
CSMD3-202ENST00000339701 ZDHHC16Q969W1 377 aa3.16□□□□□ -1.9
CSMD3-202ENST00000339701 ZNF566Q969W8 418 aa3.16□□□□□ -1.9
CSMD3-202ENST00000339701 RCN3Q96D15 328 aa3.16□□□□□ -1.9
CSMD3-202ENST00000339701 PRRT1Q99946 306 aa3.16□□□□□ -1.9
CSMD3-202ENST00000339701 FN3KRPQ9HA64 309 aa3.16□□□□□ -1.9
CSMD3-202ENST00000339701 RBM12Q9NTZ6 932 aaKnown RBP3.16□□□□□ -1.9
CSMD3-202ENST00000339701 ZNF226Q9NYT6 803 aa3.16□□□□□ -1.9
CSMD3-202ENST00000339701 ZMAT5Q9UDW3 170 aaKnown RBP3.16□□□□□ -1.9
CSMD3-202ENST00000339701 DKKL1Q9UK85 242 aa3.16□□□□□ -1.9
CSMD3-202ENST00000339701 ZFR2Q9UPR6 939 aaKnown RBP3.16□□□□□ -1.9
CSMD3-202ENST00000339701 POLR3HQ9Y535 204 aaPredicted RBP3.16□□□□□ -1.9
CSMD3-202ENST00000339701 SEC14L5O43304 696 aa3.16□□□□□ -1.9
CSMD3-202ENST00000339701 GPRIN2O60269 458 aa3.16□□□□□ -1.9
CSMD3-202ENST00000339701 DIRAS1O95057 198 aa3.16□□□□□ -1.9
CSMD3-202ENST00000339701 CLDN9O95484 217 aa3.16□□□□□ -1.9
CSMD3-202ENST00000339701 CST1P01037 141 aa3.16□□□□□ -1.9
CSMD3-202ENST00000339701 CD247P20963 164 aa3.16□□□□□ -1.9
CSMD3-202ENST00000339701 UGT1A3P35503 534 aa3.16□□□□□ -1.9
CSMD3-202ENST00000339701 IDH2P48735 452 aaKnown RBP3.16□□□□□ -1.9
CSMD3-202ENST00000339701 KHKP50053 298 aa3.16□□□□□ -1.9
CSMD3-202ENST00000339701 HNRNPFP52597 415 aaKnown RBP3.16□□□□□ -1.9
CSMD3-202ENST00000339701 NTRK3Q16288 839 aa3.16□□□□□ -1.9
CSMD3-202ENST00000339701 PROX2Q3B8N5 592 aa3.16□□□□□ -1.9
CSMD3-202ENST00000339701 C4orf46Q504U0 113 aa3.16□□□□□ -1.9
CSMD3-202ENST00000339701 HYIQ5T013 277 aa3.16□□□□□ -1.9
CSMD3-202ENST00000339701 CD163Q86VB7 1156 aa3.16□□□□□ -1.9
CSMD3-202ENST00000339701 LRRC56Q8IYG6 542 aaPredicted RBP3.16□□□□□ -1.9
CSMD3-202ENST00000339701 OR52K1Q8NGK4 314 aa3.16□□□□□ -1.9
CSMD3-202ENST00000339701 KIAA1191Q96A73 305 aa3.16□□□□□ -1.9
CSMD3-202ENST00000339701 NTAN1Q96AB6 310 aa3.16□□□□□ -1.9
CSMD3-202ENST00000339701 TMEM176AQ96HP8 235 aa3.16□□□□□ -1.9
CSMD3-202ENST00000339701 CDKN2AIPNLQ96HQ2 116 aa3.16□□□□□ -1.9
CSMD3-202ENST00000339701 THOC3Q96J01 351 aaKnown RBP3.16□□□□□ -1.9
CSMD3-202ENST00000339701 BTN2A3PQ96KV6 586 aa3.16□□□□□ -1.9
CSMD3-202ENST00000339701 CBWD1Q9BRT8 395 aa3.16□□□□□ -1.9
CSMD3-202ENST00000339701 TTYH2Q9BSA4 534 aa3.16□□□□□ -1.9
CSMD3-202ENST00000339701 HGH1Q9BTY7 390 aa3.16□□□□□ -1.9
CSMD3-202ENST00000339701 TARS2Q9BW92 718 aaKnown RBP3.16□□□□□ -1.9
CSMD3-202ENST00000339701 MAGEH1Q9H213 219 aa3.16□□□□□ -1.9
CSMD3-202ENST00000339701 IL17RBQ9NRM6 502 aa3.16□□□□□ -1.9
CSMD3-202ENST00000339701 CCM2LQ9NUG4 571 aaPredicted RBP3.16□□□□□ -1.9
CSMD3-202ENST00000339701 SLC7A11Q9UPY5 501 aa3.16□□□□□ -1.9
CSMD3-202ENST00000339701 MRPS2Q9Y399 296 aaKnown RBP3.16□□□□□ -1.9
CSMD3-202ENST00000339701 SLC22A31A6NKX4 558 aa3.15□□□□□ -1.9
CSMD3-202ENST00000339701 FOXE1O00358 373 aaPredicted RBP3.15□□□□□ -1.9
CSMD3-202ENST00000339701 DIRAS3O95661 229 aa3.15□□□□□ -1.9
CSMD3-202ENST00000339701 TSPAN12O95859 305 aa3.15□□□□□ -1.9
CSMD3-202ENST00000339701 NR2F1P10589 423 aa3.15□□□□□ -1.9
CSMD3-202ENST00000339701 CHRM1P11229 460 aaPredicted RBP3.15□□□□□ -1.9
CSMD3-202ENST00000339701 MTHFD2P13995 350 aa3.15□□□□□ -1.9
CSMD3-202ENST00000339701 HK1P19367 917 aa3.15□□□□□ -1.9
CSMD3-202ENST00000339701 MAOAP21397 527 aa3.15□□□□□ -1.9
CSMD3-202ENST00000339701 COMTP21964 271 aa3.15□□□□□ -1.9
CSMD3-202ENST00000339701 NFYBP25208 207 aa3.15□□□□□ -1.9
CSMD3-202ENST00000339701 CERS1P27544 350 aa3.15□□□□□ -1.9
CSMD3-202ENST00000339701 RAP2BP61225 183 aa3.15□□□□□ -1.9
CSMD3-202ENST00000339701 SORDQ00796 357 aa3.15□□□□□ -1.9
CSMD3-202ENST00000339701 PLA2G7Q13093 441 aa3.15□□□□□ -1.9
CSMD3-202ENST00000339701 MTF1Q14872 753 aa3.15□□□□□ -1.9
CSMD3-202ENST00000339701 FAM83HQ6ZRV2 1179 aaPredicted RBP3.15□□□□□ -1.9
CSMD3-202ENST00000339701 FAM183BPQ6ZVS7 135 aa3.15□□□□□ -1.9
CSMD3-202ENST00000339701 SLC46A3Q7Z3Q1 461 aa3.15□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms