RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 FGF17O60258 216 aa10.55□□□□□ -0.72
CSMD2-202ENST00000338325 SCELO95171 688 aa10.55□□□□□ -0.72
CSMD2-202ENST00000338325 FBXO45P0C2W1 286 aa10.55□□□□□ -0.72
CSMD2-202ENST00000338325 CD22P20273 847 aa10.55□□□□□ -0.72
CSMD2-202ENST00000338325 CPN2P22792 545 aa10.55□□□□□ -0.72
CSMD2-202ENST00000338325 GGT5P36269 586 aa10.55□□□□□ -0.72
CSMD2-202ENST00000338325 ELK3P41970 407 aa10.55□□□□□ -0.72
CSMD2-202ENST00000338325 MSH2P43246 934 aa10.55□□□□□ -0.72
CSMD2-202ENST00000338325 TAS2R39P59534 338 aa10.55□□□□□ -0.72
CSMD2-202ENST00000338325 DCAF7P61962 342 aa10.55□□□□□ -0.72
CSMD2-202ENST00000338325 SORDQ00796 357 aa10.55□□□□□ -0.72
CSMD2-202ENST00000338325 PLIN5Q00G26 463 aa10.55□□□□□ -0.72
CSMD2-202ENST00000338325 CRYZQ08257 329 aaKnown RBP10.55□□□□□ -0.72
CSMD2-202ENST00000338325 LAPTM5Q13571 262 aa10.55□□□□□ -0.72
CSMD2-202ENST00000338325 SF3B4Q15427 424 aaKnown RBP eCLIP10.55□□□□□ -0.72
CSMD2-202ENST00000338325 PAGE2BQ5JRK9 111 aa10.55□□□□□ -0.72
CSMD2-202ENST00000338325 HP1BP3Q5SSJ5 553 aaPredicted RBP10.55□□□□□ -0.72
CSMD2-202ENST00000338325 CLEC9AQ6UXN8 241 aa10.55□□□□□ -0.72
CSMD2-202ENST00000338325 TAOK1Q7L7X3 1001 aa10.55□□□□□ -0.72
CSMD2-202ENST00000338325 ZC3HC1Q86WB0 502 aaKnown RBP10.55□□□□□ -0.72
CSMD2-202ENST00000338325 KRTAP1-3Q8IUG1 177 aa10.55□□□□□ -0.72
CSMD2-202ENST00000338325 OR4N5Q8IXE1 308 aa10.55□□□□□ -0.72
CSMD2-202ENST00000338325 PM20D2Q8IYS1 436 aa10.55□□□□□ -0.72
CSMD2-202ENST00000338325 SNX31Q8N9S9 440 aa10.55□□□□□ -0.72
CSMD2-202ENST00000338325 FBXL20Q96IG2 436 aa10.55□□□□□ -0.72
CSMD2-202ENST00000338325 DOHHQ9BU89 302 aa10.55□□□□□ -0.72
CSMD2-202ENST00000338325 PRDM14Q9GZV8 571 aa10.55□□□□□ -0.72
CSMD2-202ENST00000338325 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.55□□□□□ -0.72
CSMD2-202ENST00000338325 CNOT11Q9UKZ1 510 aaKnown RBP10.55□□□□□ -0.72
CSMD2-202ENST00000338325 PSAT1Q9Y617 370 aa10.55□□□□□ -0.72
CSMD2-202ENST00000338325 FBN3Q75N90 2809 aa10.54□□□□□ -0.72
CSMD2-202ENST00000338325 CLCA1A8K7I4 914 aa10.54□□□□□ -0.72
CSMD2-202ENST00000338325 HRKO00198 91 aa10.54□□□□□ -0.72
CSMD2-202ENST00000338325 TRIM3O75382 744 aaPredicted RBP10.54□□□□□ -0.72
CSMD2-202ENST00000338325 LRATO95237 230 aa10.54□□□□□ -0.72
CSMD2-202ENST00000338325 C1QAP02745 245 aa10.54□□□□□ -0.72
CSMD2-202ENST00000338325 HIST1H1TP22492 207 aaPredicted RBP10.54□□□□□ -0.72
CSMD2-202ENST00000338325 SERPINB3P29508 390 aa10.54□□□□□ -0.72
CSMD2-202ENST00000338325 SSR2P43308 183 aa10.54□□□□□ -0.72
CSMD2-202ENST00000338325 HSPA7P48741 367 aa10.54□□□□□ -0.72
CSMD2-202ENST00000338325 BIKQ13323 160 aa10.54□□□□□ -0.72
CSMD2-202ENST00000338325 FRG1Q14331 258 aaKnown RBP10.54□□□□□ -0.72
CSMD2-202ENST00000338325 NTRK2Q16620 822 aa10.54□□□□□ -0.72
CSMD2-202ENST00000338325 PDK4Q16654 411 aa10.54□□□□□ -0.72
CSMD2-202ENST00000338325 AP5B1Q2VPB7 878 aa10.54□□□□□ -0.72
CSMD2-202ENST00000338325 TMEM35AQ53FP2 167 aa10.54□□□□□ -0.72
CSMD2-202ENST00000338325 FBXO48Q5FWF7 155 aa10.54□□□□□ -0.72
CSMD2-202ENST00000338325 TBCELQ5QJ74 424 aa10.54□□□□□ -0.72
CSMD2-202ENST00000338325 NSUN5P2Q63ZY6 315 aa10.54□□□□□ -0.72
CSMD2-202ENST00000338325 DGAT2L6Q6ZPD8 337 aa10.54□□□□□ -0.72
CSMD2-202ENST00000338325 CHSY3Q70JA7 882 aa10.54□□□□□ -0.72
CSMD2-202ENST00000338325 SLC29A4Q7RTT9 530 aa10.54□□□□□ -0.72
CSMD2-202ENST00000338325 GAS2L3Q86XJ1 694 aa10.54□□□□□ -0.72
CSMD2-202ENST00000338325 PDIK1LQ8N165 341 aa10.54□□□□□ -0.72
CSMD2-202ENST00000338325 BBOF1Q8ND07 529 aa10.54□□□□□ -0.72
CSMD2-202ENST00000338325 LINC01560Q8TB33 94 aa10.54□□□□□ -0.72
CSMD2-202ENST00000338325 PPWD1Q96BP3 646 aaKnown RBP10.54□□□□□ -0.72
CSMD2-202ENST00000338325 RBM18Q96H35 190 aaKnown RBP10.54□□□□□ -0.72
CSMD2-202ENST00000338325 VPS39Q96JC1 886 aa10.54□□□□□ -0.72
CSMD2-202ENST00000338325 GAL3ST4Q96RP7 486 aa10.54□□□□□ -0.72
CSMD2-202ENST00000338325 TIMP4Q99727 224 aa10.54□□□□□ -0.72
CSMD2-202ENST00000338325 WDR83Q9BRX9 315 aaKnown RBP10.54□□□□□ -0.72
CSMD2-202ENST00000338325 YIPF4Q9BSR8 244 aa10.54□□□□□ -0.72
CSMD2-202ENST00000338325 DERL2Q9GZP9 239 aa10.54□□□□□ -0.72
CSMD2-202ENST00000338325 WWTR1Q9GZV5 400 aa10.54□□□□□ -0.72
CSMD2-202ENST00000338325 POPDC3Q9HBV1 291 aa10.54□□□□□ -0.72
CSMD2-202ENST00000338325 PRM3Q9NNZ6 103 aa10.54□□□□□ -0.72
CSMD2-202ENST00000338325 BEX4Q9NWD9 120 aaPredicted RBP10.54□□□□□ -0.72
CSMD2-202ENST00000338325 CAMK2AQ9UQM7 478 aa10.54□□□□□ -0.72
CSMD2-202ENST00000338325 JRKLQ9Y4A0 524 aa10.54□□□□□ -0.72
CSMD2-202ENST00000338325 TEX264Q9Y6I9 313 aa10.54□□□□□ -0.72
CSMD2-202ENST00000338325 EEF1E1-BLOC1S5C9J1V9 151 aa10.53□□□□□ -0.72
CSMD2-202ENST00000338325 EEF1E1O43324 174 aaKnown RBP10.53□□□□□ -0.72
CSMD2-202ENST00000338325 STK16O75716 305 aa10.53□□□□□ -0.72
CSMD2-202ENST00000338325 HEXAP06865 529 aa10.53□□□□□ -0.72
CSMD2-202ENST00000338325 ALOX15P16050 662 aaPredicted RBP10.53□□□□□ -0.72
CSMD2-202ENST00000338325 CD53P19397 219 aa10.53□□□□□ -0.72
CSMD2-202ENST00000338325 MGAT5Q09328 741 aa10.53□□□□□ -0.72
CSMD2-202ENST00000338325 PCBP2Q15366 365 aaKnown RBP eCLIP10.53□□□□□ -0.72
CSMD2-202ENST00000338325 HIST2H2ACQ16777 129 aaPredicted RBP10.53□□□□□ -0.72
CSMD2-202ENST00000338325 SPRED3Q2MJR0 410 aa10.53□□□□□ -0.72
CSMD2-202ENST00000338325 CDKL4Q5MAI5 379 aa10.53□□□□□ -0.72
CSMD2-202ENST00000338325 TMEM198Q66K66 360 aa10.53□□□□□ -0.72
CSMD2-202ENST00000338325 HIST2H2AA3Q6FI13 130 aa10.53□□□□□ -0.72
CSMD2-202ENST00000338325 SULT1C3Q6IMI6 304 aa10.53□□□□□ -0.72
CSMD2-202ENST00000338325 RNF111Q6ZNA4 994 aa10.53□□□□□ -0.72
CSMD2-202ENST00000338325 ZNF473Q8WTR7 871 aaKnown RBP10.53□□□□□ -0.72
CSMD2-202ENST00000338325 DIO2Q92813 273 aa10.53□□□□□ -0.72
CSMD2-202ENST00000338325 ESAMQ96AP7 390 aa10.53□□□□□ -0.72
CSMD2-202ENST00000338325 LRRC39Q96DD0 335 aa10.53□□□□□ -0.72
CSMD2-202ENST00000338325 ARSGQ96EG1 525 aa10.53□□□□□ -0.72
CSMD2-202ENST00000338325 KRT12Q99456 494 aa10.53□□□□□ -0.72
CSMD2-202ENST00000338325 PHACTR1Q9C0D0 580 aa10.53□□□□□ -0.72
CSMD2-202ENST00000338325 EPB41L4BQ9H329 900 aa10.53□□□□□ -0.72
CSMD2-202ENST00000338325 RPF2Q9H7B2 306 aaKnown RBP10.53□□□□□ -0.72
CSMD2-202ENST00000338325 MS4A12Q9NXJ0 267 aa10.53□□□□□ -0.72
CSMD2-202ENST00000338325 IKBKGQ9Y6K9 419 aa10.53□□□□□ -0.72
CSMD2-202ENST00000338325 IQANK1A0A1B0GTG1 560 aa10.53□□□□□ -0.72
CSMD2-202ENST00000338325 ANKRD33BA6NCL7 494 aa10.53□□□□□ -0.72
CSMD2-202ENST00000338325 MBD3L4A6NDZ8 208 aaPredicted RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms