RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 LRIT2A6NDA9 550 aa15.52■□□□□ 0.07
PDLIM1-201ENST00000329399 EVPLLA8MZ36 301 aa15.52■□□□□ 0.07
PDLIM1-201ENST00000329399 C9JVG2 144 aa15.52■□□□□ 0.07
PDLIM1-201ENST00000329399 RFXANKO14593 260 aa15.52■□□□□ 0.07
PDLIM1-201ENST00000329399 CPNE3O75131 537 aaKnown RBP15.52■□□□□ 0.07
PDLIM1-201ENST00000329399 PRKAR1AP10644 381 aa15.52■□□□□ 0.07
PDLIM1-201ENST00000329399 BSGP35613 385 aa15.52■□□□□ 0.07
PDLIM1-201ENST00000329399 RGS1Q08116 209 aa15.52■□□□□ 0.07
PDLIM1-201ENST00000329399 RCN1Q15293 331 aa15.52■□□□□ 0.07
PDLIM1-201ENST00000329399 LINC00303Q3SY05 128 aa15.52■□□□□ 0.07
PDLIM1-201ENST00000329399 PLD3Q8IV08 490 aa15.52■□□□□ 0.07
PDLIM1-201ENST00000329399 RNF175Q8N4F7 328 aa15.52■□□□□ 0.07
PDLIM1-201ENST00000329399 CLHC1Q8NHS4 586 aa15.52■□□□□ 0.07
PDLIM1-201ENST00000329399 NT5CQ8TCD5 201 aa15.52■□□□□ 0.07
PDLIM1-201ENST00000329399 SLC26A7Q8TE54 656 aa15.52■□□□□ 0.07
PDLIM1-201ENST00000329399 EXTL1Q92935 676 aa15.52■□□□□ 0.07
PDLIM1-201ENST00000329399 CLIP3Q96DZ5 547 aa15.52■□□□□ 0.07
PDLIM1-201ENST00000329399 EGLN2Q96KS0 407 aa15.52■□□□□ 0.07
PDLIM1-201ENST00000329399 ECSITQ9BQ95 431 aa15.52■□□□□ 0.07
PDLIM1-201ENST00000329399 EFHD1Q9BUP0 239 aa15.52■□□□□ 0.07
PDLIM1-201ENST00000329399 SPATA9Q9BWV2 254 aa15.52■□□□□ 0.07
PDLIM1-201ENST00000329399 EBPLQ9BY08 206 aa15.52■□□□□ 0.07
PDLIM1-201ENST00000329399 PRDM9Q9NQV7 894 aa15.52■□□□□ 0.07
PDLIM1-201ENST00000329399 PCDHGB4Q9UN71 923 aa15.52■□□□□ 0.07
PDLIM1-201ENST00000329399 TRBV5-3A0A0A0MS03 114 aa15.51■□□□□ 0.07
PDLIM1-201ENST00000329399 A0A0J9YVX5 310 aa15.51■□□□□ 0.07
PDLIM1-201ENST00000329399 GABRR3A8MPY1 467 aa15.51■□□□□ 0.07
PDLIM1-201ENST00000329399 PLPP1O14494 284 aa15.51■□□□□ 0.07
PDLIM1-201ENST00000329399 MAP3K7O43318 606 aa15.51■□□□□ 0.07
PDLIM1-201ENST00000329399 ANP32DO95626 131 aa15.51■□□□□ 0.07
PDLIM1-201ENST00000329399 KLK1P06870 262 aa15.51■□□□□ 0.07
PDLIM1-201ENST00000329399 C8BP07358 591 aa15.51■□□□□ 0.07
PDLIM1-201ENST00000329399 CCNYL3P0C7X3 344 aa15.51■□□□□ 0.07
PDLIM1-201ENST00000329399 UMPSP11172 480 aa15.51■□□□□ 0.07
PDLIM1-201ENST00000329399 DRD2P14416 443 aa15.51■□□□□ 0.07
PDLIM1-201ENST00000329399 ZNF10P21506 573 aaPredicted RBP15.51■□□□□ 0.07
PDLIM1-201ENST00000329399 MAPK12P53778 367 aa15.51■□□□□ 0.07
PDLIM1-201ENST00000329399 RHDQ02161 417 aa15.51■□□□□ 0.07
PDLIM1-201ENST00000329399 LIPEQ05469 1076 aa15.51■□□□□ 0.07
PDLIM1-201ENST00000329399 DNASE1L3Q13609 305 aa15.51■□□□□ 0.07
PDLIM1-201ENST00000329399 OR4C11Q6IEV9 310 aa15.51■□□□□ 0.07
PDLIM1-201ENST00000329399 ADNP2Q6IQ32 1131 aa15.51■□□□□ 0.07
PDLIM1-201ENST00000329399 LCN8Q6JVE9 175 aa15.51■□□□□ 0.07
PDLIM1-201ENST00000329399 ZCCHC7Q8N3Z6 543 aaKnown RBP15.51■□□□□ 0.07
PDLIM1-201ENST00000329399 TRIML2Q8N7C3 387 aa15.51■□□□□ 0.07
PDLIM1-201ENST00000329399 OR2L5Q8NG80 312 aa15.51■□□□□ 0.07
PDLIM1-201ENST00000329399 OR52E4Q8NGH9 312 aa15.51■□□□□ 0.07
PDLIM1-201ENST00000329399 MR1Q95460 341 aa15.51■□□□□ 0.07
PDLIM1-201ENST00000329399 ZNF285Q96NJ3 590 aa15.51■□□□□ 0.07
PDLIM1-201ENST00000329399 KCTD14Q9BQ13 255 aaPredicted RBP15.51■□□□□ 0.07
PDLIM1-201ENST00000329399 SEMA4CQ9C0C4 833 aa15.51■□□□□ 0.07
PDLIM1-201ENST00000329399 PAIP1Q9H074 479 aaKnown RBP15.51■□□□□ 0.07
PDLIM1-201ENST00000329399 VCX3BQ9H321 246 aa15.51■□□□□ 0.07
PDLIM1-201ENST00000329399 FANCEQ9HB96 536 aa15.51■□□□□ 0.07
PDLIM1-201ENST00000329399 SERHLQ9NQF3 203 aa15.51■□□□□ 0.07
PDLIM1-201ENST00000329399 SLC22A11Q9NSA0 550 aa15.51■□□□□ 0.07
PDLIM1-201ENST00000329399 EHD3Q9NZN3 535 aa15.51■□□□□ 0.07
PDLIM1-201ENST00000329399 C6orf203Q9P0P8 240 aaPredicted RBP15.51■□□□□ 0.07
PDLIM1-201ENST00000329399 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.51■□□□□ 0.07
PDLIM1-201ENST00000329399 MAGEL2Q9UJ55 1249 aa15.51■□□□□ 0.07
PDLIM1-201ENST00000329399 SNX13Q9Y5W8 968 aa15.51■□□□□ 0.07
PDLIM1-201ENST00000329399 MDC1Q14676 2089 aaKnown RBP15.5■□□□□ 0.07
PDLIM1-201ENST00000329399 FEZF1A0PJY2 475 aa15.5■□□□□ 0.07
PDLIM1-201ENST00000329399 HAT1O14929 419 aa15.5■□□□□ 0.07
PDLIM1-201ENST00000329399 ZSCAN9O15535 394 aaPredicted RBP15.5■□□□□ 0.07
PDLIM1-201ENST00000329399 LCMT2O60294 686 aaKnown RBP15.5■□□□□ 0.07
PDLIM1-201ENST00000329399 SCN2BO60939 215 aa15.5■□□□□ 0.07
PDLIM1-201ENST00000329399 TBX6O95947 436 aaPredicted RBP15.5■□□□□ 0.07
PDLIM1-201ENST00000329399 PRB1P04280 392 aa15.5■□□□□ 0.07
PDLIM1-201ENST00000329399 SLC35G6P0C7Q6 338 aa15.5■□□□□ 0.07
PDLIM1-201ENST00000329399 TPP2P29144 1249 aaPredicted RBP15.5■□□□□ 0.07
PDLIM1-201ENST00000329399 BCL6P41182 706 aa15.5■□□□□ 0.07
PDLIM1-201ENST00000329399 VSX2P58304 361 aaPredicted RBP15.5■□□□□ 0.07
PDLIM1-201ENST00000329399 MS4A2Q01362 244 aa15.5■□□□□ 0.07
PDLIM1-201ENST00000329399 KLC1Q07866 573 aa15.5■□□□□ 0.07
PDLIM1-201ENST00000329399 C2orf80Q0P641 193 aa15.5■□□□□ 0.07
PDLIM1-201ENST00000329399 CAPRIN1Q14444 709 aaKnown RBP15.5■□□□□ 0.07
PDLIM1-201ENST00000329399 TBR1Q16650 682 aa15.5■□□□□ 0.07
PDLIM1-201ENST00000329399 HKDC1Q2TB90 917 aa15.5■□□□□ 0.07
PDLIM1-201ENST00000329399 TRIM40Q6P9F5 258 aa15.5■□□□□ 0.07
PDLIM1-201ENST00000329399 EXD3Q8N9H8 876 aa15.5■□□□□ 0.07
PDLIM1-201ENST00000329399 CAMKVQ8NCB2 501 aa15.5■□□□□ 0.07
PDLIM1-201ENST00000329399 BHLHE22Q8NFJ8 381 aaPredicted RBP15.5■□□□□ 0.07
PDLIM1-201ENST00000329399 GOT1L1Q8NHS2 421 aaPredicted RBP15.5■□□□□ 0.07
PDLIM1-201ENST00000329399 N4BP2L2Q92802 583 aaPredicted RBP15.5■□□□□ 0.07
PDLIM1-201ENST00000329399 PPCDCQ96CD2 204 aa15.5■□□□□ 0.07
PDLIM1-201ENST00000329399 LRFN5Q96NI6 719 aa15.5■□□□□ 0.07
PDLIM1-201ENST00000329399 F2RL3Q96RI0 385 aa15.5■□□□□ 0.07
PDLIM1-201ENST00000329399 SLC39A3Q9BRY0 314 aa15.5■□□□□ 0.07
PDLIM1-201ENST00000329399 FAIM2Q9BWQ8 316 aa15.5■□□□□ 0.07
PDLIM1-201ENST00000329399 TAS2R7Q9NYW3 318 aa15.5■□□□□ 0.07
PDLIM1-201ENST00000329399 ZNF282Q9UDV7 671 aaPredicted RBP15.5■□□□□ 0.07
PDLIM1-201ENST00000329399 MED13Q9UHV7 2174 aa15.5■□□□□ 0.07
PDLIM1-201ENST00000329399 FASNP49327 2511 aaKnown RBP15.49■□□□□ 0.07
PDLIM1-201ENST00000329399 TXNDC9O14530 226 aa15.49■□□□□ 0.07
PDLIM1-201ENST00000329399 AKAP10O43572 662 aa15.49■□□□□ 0.07
PDLIM1-201ENST00000329399 CNOT3O75175 753 aaKnown RBP15.49■□□□□ 0.07
PDLIM1-201ENST00000329399 KRT36O76013 467 aa15.49■□□□□ 0.07
PDLIM1-201ENST00000329399 STATHP02808 62 aa15.49■□□□□ 0.07
PDLIM1-201ENST00000329399 ANPEPP15144 967 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms