RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 EDDM13A0A1B0GTR0 161 aa16.21■□□□□ 0.19
SMCHD1-201ENST00000320876 EVI2BP34910 448 aa16.21■□□□□ 0.19
SMCHD1-201ENST00000320876 CLCNKAP51800 687 aa16.21■□□□□ 0.19
SMCHD1-201ENST00000320876 GINS1Q14691 196 aa16.21■□□□□ 0.19
SMCHD1-201ENST00000320876 ELP2Q6IA86 826 aa16.21■□□□□ 0.19
SMCHD1-201ENST00000320876 OR8U9P0C7N5 309 aa16.21■□□□□ 0.19
SMCHD1-201ENST00000320876 PTPN2P17706 415 aa16.21■□□□□ 0.19
SMCHD1-201ENST00000320876 DGKEP52429 567 aa16.21■□□□□ 0.19
SMCHD1-201ENST00000320876 SPHARQ15513 63 aa16.21■□□□□ 0.19
SMCHD1-201ENST00000320876 IKZF4Q9H2S9 585 aa16.21■□□□□ 0.19
SMCHD1-201ENST00000320876 ZNF84P51523 738 aa16.21■□□□□ 0.18
SMCHD1-201ENST00000320876 TREML2Q5T2D2 321 aa16.21■□□□□ 0.18
SMCHD1-201ENST00000320876 GPR157Q5UAW9 335 aa16.21■□□□□ 0.18
SMCHD1-201ENST00000320876 MAP1SQ66K74 1059 aaPredicted RBP16.21■□□□□ 0.18
SMCHD1-201ENST00000320876 C1orf94Q6P1W5 598 aa16.21■□□□□ 0.18
SMCHD1-201ENST00000320876 PRSS48Q7RTY5 328 aa16.21■□□□□ 0.18
SMCHD1-201ENST00000320876 ZDHHC14Q8IZN3 488 aa16.21■□□□□ 0.18
SMCHD1-201ENST00000320876 CHDHQ8NE62 594 aaPredicted RBP16.21■□□□□ 0.18
SMCHD1-201ENST00000320876 CLEC4CQ8WTT0 213 aa16.21■□□□□ 0.18
SMCHD1-201ENST00000320876 GALPQ9UBC7 116 aa16.21■□□□□ 0.18
SMCHD1-201ENST00000320876 FAM230AA0A1W2PPH8 454 aa16.2■□□□□ 0.18
SMCHD1-201ENST00000320876 ZNF701M0R085 212 aaPredicted RBP16.2■□□□□ 0.18
SMCHD1-201ENST00000320876 DDNO94850 711 aaPredicted RBP16.2■□□□□ 0.18
SMCHD1-201ENST00000320876 H2BFMP0C1H6 154 aa16.2■□□□□ 0.18
SMCHD1-201ENST00000320876 PRMT2P55345 433 aa16.2■□□□□ 0.18
SMCHD1-201ENST00000320876 MLLT1Q03111 559 aaPredicted RBP16.2■□□□□ 0.18
SMCHD1-201ENST00000320876 PDGFRLQ15198 375 aa16.2■□□□□ 0.18
SMCHD1-201ENST00000320876 EXOC3L2Q2M3D2 409 aa16.2■□□□□ 0.18
SMCHD1-201ENST00000320876 CLEC20AQ6ZU45 233 aa16.2■□□□□ 0.18
SMCHD1-201ENST00000320876 PIGVQ9NUD9 493 aa16.2■□□□□ 0.18
SMCHD1-201ENST00000320876 KLHL9Q9P2J3 617 aa16.2■□□□□ 0.18
SMCHD1-201ENST00000320876 KLRG2A4D1S0 409 aaPredicted RBP16.2■□□□□ 0.18
SMCHD1-201ENST00000320876 CD9P21926 228 aa16.2■□□□□ 0.18
SMCHD1-201ENST00000320876 SP3Q02447 781 aa16.2■□□□□ 0.18
SMCHD1-201ENST00000320876 INAVAQ3KP66 663 aa16.2■□□□□ 0.18
SMCHD1-201ENST00000320876 ARSIQ5FYB1 569 aa16.2■□□□□ 0.18
SMCHD1-201ENST00000320876 RELTQ969Z4 430 aa16.2■□□□□ 0.18
SMCHD1-201ENST00000320876 SARDHQ9UL12 918 aa16.2■□□□□ 0.18
SMCHD1-201ENST00000320876 ASB4Q9Y574 426 aa16.2■□□□□ 0.18
SMCHD1-201ENST00000320876 IDH3GP51553 393 aaPredicted RBP16.2■□□□□ 0.18
SMCHD1-201ENST00000320876 OR56B2PQ8NGI1 322 aa16.2■□□□□ 0.18
SMCHD1-201ENST00000320876 NPIPA2E9PIF3 369 aa16.2■□□□□ 0.18
SMCHD1-201ENST00000320876 NPIPA3F8WFD2 350 aa16.2■□□□□ 0.18
SMCHD1-201ENST00000320876 LSSP48449 732 aa16.2■□□□□ 0.18
SMCHD1-201ENST00000320876 NME7Q9Y5B8 376 aa16.2■□□□□ 0.18
SMCHD1-201ENST00000320876 RP1L1Q8IWN7 2480 aaPredicted RBP16.2■□□□□ 0.18
SMCHD1-201ENST00000320876 NUP98P52948 1817 aa16.2■□□□□ 0.18
SMCHD1-201ENST00000320876 SLC1A7O00341 560 aa16.2■□□□□ 0.18
SMCHD1-201ENST00000320876 SOX1O00570 391 aaPredicted RBP16.2■□□□□ 0.18
SMCHD1-201ENST00000320876 OIP5O43482 229 aa16.2■□□□□ 0.18
SMCHD1-201ENST00000320876 ACP5P13686 325 aa16.2■□□□□ 0.18
SMCHD1-201ENST00000320876 IL1R2P27930 398 aa16.2■□□□□ 0.18
SMCHD1-201ENST00000320876 VIPR1P32241 457 aa16.2■□□□□ 0.18
SMCHD1-201ENST00000320876 RPL35P42766 123 aaKnown RBP16.2■□□□□ 0.18
SMCHD1-201ENST00000320876 TDGQ13569 410 aa16.2■□□□□ 0.18
SMCHD1-201ENST00000320876 CHRNA6Q15825 494 aa16.2■□□□□ 0.18
SMCHD1-201ENST00000320876 WDR77Q9BQA1 342 aaPredicted RBP16.2■□□□□ 0.18
SMCHD1-201ENST00000320876 TUBG2Q9NRH3 451 aa16.2■□□□□ 0.18
SMCHD1-201ENST00000320876 MRPS17Q9Y2R5 130 aaKnown RBP16.2■□□□□ 0.18
SMCHD1-201ENST00000320876 XRN1Q8IZH2 1706 aaKnown RBP16.2■□□□□ 0.18
SMCHD1-201ENST00000320876 LOC730098B7Z3J9 87 aa16.2■□□□□ 0.18
SMCHD1-201ENST00000320876 SULT1C2O00338 296 aa16.2■□□□□ 0.18
SMCHD1-201ENST00000320876 KCNC1P48547 511 aa16.2■□□□□ 0.18
SMCHD1-201ENST00000320876 MC2RQ01718 297 aa16.2■□□□□ 0.18
SMCHD1-201ENST00000320876 GPR149Q86SP6 731 aa16.2■□□□□ 0.18
SMCHD1-201ENST00000320876 RELL1Q8IUW5 271 aa16.2■□□□□ 0.18
SMCHD1-201ENST00000320876 MGLLQ99685 303 aa16.2■□□□□ 0.18
SMCHD1-201ENST00000320876 FUNDC2Q9BWH2 189 aa16.2■□□□□ 0.18
SMCHD1-201ENST00000320876 SMOC2Q9H3U7 446 aa16.2■□□□□ 0.18
SMCHD1-201ENST00000320876 UBE2J1Q9Y385 318 aaPredicted RBP16.2■□□□□ 0.18
SMCHD1-201ENST00000320876 OTOL1A6NHN0 477 aaPredicted RBP16.2■□□□□ 0.18
SMCHD1-201ENST00000320876 CASC3O15234 703 aaKnown RBP16.2■□□□□ 0.18
SMCHD1-201ENST00000320876 CHATP28329 748 aa16.2■□□□□ 0.18
SMCHD1-201ENST00000320876 CMPK2Q5EBM0 449 aa16.2■□□□□ 0.18
SMCHD1-201ENST00000320876 ARL14EPQ8N8R7 260 aaPredicted RBP16.2■□□□□ 0.18
SMCHD1-201ENST00000320876 GLYATL2Q8WU03 294 aa16.2■□□□□ 0.18
SMCHD1-201ENST00000320876 TMEM125Q96AQ2 219 aa16.2■□□□□ 0.18
SMCHD1-201ENST00000320876 TSGA13Q96PP4 275 aa16.2■□□□□ 0.18
SMCHD1-201ENST00000320876 SLC34A2O95436 690 aa16.19■□□□□ 0.18
SMCHD1-201ENST00000320876 HTR1EP28566 365 aa16.19■□□□□ 0.18
SMCHD1-201ENST00000320876 BDKRB1P46663 353 aa16.19■□□□□ 0.18
SMCHD1-201ENST00000320876 GAS6Q14393 721 aa16.19■□□□□ 0.18
SMCHD1-201ENST00000320876 OR5H2Q8NGV7 314 aa16.19■□□□□ 0.18
SMCHD1-201ENST00000320876 RPS10P5Q9NQ39 176 aa16.19■□□□□ 0.18
SMCHD1-201ENST00000320876 ARMC1Q9NVT9 282 aa16.19■□□□□ 0.18
SMCHD1-201ENST00000320876 CLEC4EQ9ULY5 219 aa16.19■□□□□ 0.18
SMCHD1-201ENST00000320876 UPK1BO75841 260 aa16.19■□□□□ 0.18
SMCHD1-201ENST00000320876 FECHP22830 423 aa16.19■□□□□ 0.18
SMCHD1-201ENST00000320876 HLCSP50747 726 aa16.19■□□□□ 0.18
SMCHD1-201ENST00000320876 GPR143P51810 404 aa16.19■□□□□ 0.18
SMCHD1-201ENST00000320876 PLP2Q04941 152 aa16.19■□□□□ 0.18
SMCHD1-201ENST00000320876 RAB31Q13636 194 aa16.19■□□□□ 0.18
SMCHD1-201ENST00000320876 UNQ6126/PRO20091Q6UXV3 157 aa16.19■□□□□ 0.18
SMCHD1-201ENST00000320876 CCDC71LQ8N9Z2 235 aa16.19■□□□□ 0.18
SMCHD1-201ENST00000320876 SNAPC3Q92966 411 aa16.19■□□□□ 0.18
SMCHD1-201ENST00000320876 CHFRQ96EP1 664 aa16.19■□□□□ 0.18
SMCHD1-201ENST00000320876 FZD1Q9UP38 647 aa16.19■□□□□ 0.18
SMCHD1-201ENST00000320876 UBR2Q8IWV8 1755 aa16.19■□□□□ 0.18
SMCHD1-201ENST00000320876 CD6P30203 668 aa16.19■□□□□ 0.18
SMCHD1-201ENST00000320876 OR6Q1Q8NGQ2 317 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms