RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 CCNDBP1O95273 360 aa6.6□□□□□ -1.35
LYSMD3-201ENST00000315948 HOXC4P09017 264 aaPredicted RBP6.6□□□□□ -1.35
LYSMD3-201ENST00000315948 OR1D5P58170 312 aa6.6□□□□□ -1.35
LYSMD3-201ENST00000315948 SMN1Q16637 294 aaKnown RBP6.6□□□□□ -1.35
LYSMD3-201ENST00000315948 ANXA8L1Q5VT79 327 aa6.6□□□□□ -1.35
LYSMD3-201ENST00000315948 ADHFE1Q8IWW8 467 aa6.6□□□□□ -1.35
LYSMD3-201ENST00000315948 SLC25A45Q8N413 288 aa6.6□□□□□ -1.35
LYSMD3-201ENST00000315948 MARVELD2Q8N4S9 558 aa6.6□□□□□ -1.35
LYSMD3-201ENST00000315948 OR7G2Q8NG99 324 aa6.6□□□□□ -1.35
LYSMD3-201ENST00000315948 OR9Q2Q8NGE9 314 aa6.6□□□□□ -1.35
LYSMD3-201ENST00000315948 GSDMCQ9BYG8 508 aa6.6□□□□□ -1.35
LYSMD3-201ENST00000315948 YIPF3Q9GZM5 350 aa6.6□□□□□ -1.35
LYSMD3-201ENST00000315948 VCX3BQ9H321 246 aa6.6□□□□□ -1.35
LYSMD3-201ENST00000315948 OR51I1Q9H343 314 aa6.6□□□□□ -1.35
LYSMD3-201ENST00000315948 NDUFAF4Q9P032 175 aa6.6□□□□□ -1.35
LYSMD3-201ENST00000315948 CES1P1Q9UKY3 287 aa6.6□□□□□ -1.35
LYSMD3-201ENST00000315948 HEMK1Q9Y5R4 338 aaPredicted RBP6.6□□□□□ -1.35
LYSMD3-201ENST00000315948 TMEM265A0A087WTH1 108 aa6.6□□□□□ -1.35
LYSMD3-201ENST00000315948 NPIPA5A0A0B4J1W7 369 aa6.6□□□□□ -1.35
LYSMD3-201ENST00000315948 MAGEA13PA6NCF6 341 aa6.6□□□□□ -1.35
LYSMD3-201ENST00000315948 NPIPA7E9PJI5 369 aa6.6□□□□□ -1.35
LYSMD3-201ENST00000315948 FGF17O60258 216 aa6.6□□□□□ -1.35
LYSMD3-201ENST00000315948 SEMA3DO95025 777 aa6.6□□□□□ -1.35
LYSMD3-201ENST00000315948 CSF2P04141 144 aa6.6□□□□□ -1.35
LYSMD3-201ENST00000315948 TFAP2AP05549 437 aa6.6□□□□□ -1.35
LYSMD3-201ENST00000315948 RETP07949 1114 aa6.6□□□□□ -1.35
LYSMD3-201ENST00000315948 NPIPA8P0DM63 369 aa6.6□□□□□ -1.35
LYSMD3-201ENST00000315948 PAX7P23759 505 aa6.6□□□□□ -1.35
LYSMD3-201ENST00000315948 CD27P26842 260 aa6.6□□□□□ -1.35
LYSMD3-201ENST00000315948 RRM2P31350 389 aa6.6□□□□□ -1.35
LYSMD3-201ENST00000315948 RFX3P48380 749 aa6.6□□□□□ -1.35
LYSMD3-201ENST00000315948 DAPP51397 102 aa6.6□□□□□ -1.35
LYSMD3-201ENST00000315948 CCR5P51681 352 aa6.6□□□□□ -1.35
LYSMD3-201ENST00000315948 CFHR1Q03591 330 aa6.6□□□□□ -1.35
LYSMD3-201ENST00000315948 EXOSC7Q15024 291 aaKnown RBP6.6□□□□□ -1.35
LYSMD3-201ENST00000315948 NNATQ16517 81 aa6.6□□□□□ -1.35
LYSMD3-201ENST00000315948 GCNT6Q5T4J0 391 aa6.6□□□□□ -1.35
LYSMD3-201ENST00000315948 MRM1Q6IN84 353 aaKnown RBP6.6□□□□□ -1.35
LYSMD3-201ENST00000315948 PARP8Q8N3A8 854 aa6.6□□□□□ -1.35
LYSMD3-201ENST00000315948 GPR32P1Q8NGA4 272 aa6.6□□□□□ -1.35
LYSMD3-201ENST00000315948 OR52N2Q8NGI0 321 aa6.6□□□□□ -1.35
LYSMD3-201ENST00000315948 GOT1L1Q8NHS2 421 aaPredicted RBP6.6□□□□□ -1.35
LYSMD3-201ENST00000315948 NCSTNQ92542 709 aa6.6□□□□□ -1.35
LYSMD3-201ENST00000315948 BTBD9Q96Q07 612 aa6.6□□□□□ -1.35
LYSMD3-201ENST00000315948 BBS4Q96RK4 519 aa6.6□□□□□ -1.35
LYSMD3-201ENST00000315948 ATAD3AQ9NVI7 634 aa6.6□□□□□ -1.35
LYSMD3-201ENST00000315948 AHSPQ9NZD4 102 aa6.6□□□□□ -1.35
LYSMD3-201ENST00000315948 KCMF1Q9P0J7 381 aa6.6□□□□□ -1.35
LYSMD3-201ENST00000315948 ZNF282Q9UDV7 671 aaPredicted RBP6.6□□□□□ -1.35
LYSMD3-201ENST00000315948 SCOCQ9UIL1 159 aa6.6□□□□□ -1.35
LYSMD3-201ENST00000315948 DOLKQ9UPQ8 538 aa6.6□□□□□ -1.35
LYSMD3-201ENST00000315948 A0A1W2PPC1 479 aa6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 OR5K3A6NET4 321 aa6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 TGFBR3LH3BV60 316 aa6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 M0R3H8 397 aa6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 FFAR1O14842 300 aa6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 LIM2P55344 173 aa6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 BNC1Q01954 994 aa6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 ZNF33BQ06732 778 aa6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 KCNAB2Q13303 367 aa6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 MEP1AQ16819 746 aa6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 CTU2Q2VPK5 515 aaKnown RBP6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 SLC36A3Q495N2 470 aa6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 CBLL1Q75N03 491 aa6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 TMPRSS9Q7Z410 1059 aa6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 C11orf74Q86VG3 221 aa6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 ZDHHC13Q8IUH4 622 aa6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 SLC16A11Q8NCK7 471 aa6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 C11orf65Q8NCR3 313 aa6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 CNIH3Q8TBE1 160 aa6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 C10orf90Q96M02 699 aa6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 BDH2Q9BUT1 245 aa6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 IL1RAPQ9NPH3 570 aa6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 SMPD3Q9NY59 655 aaPredicted RBP6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 RAB26Q9ULW5 256 aa6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 SAMHD1Q9Y3Z3 626 aaKnown RBP6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 PCDH17O14917 1159 aa6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 DEAF1O75398 565 aaPredicted RBP6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 EPPINO95925 133 aa6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 SEMG1P04279 462 aa6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 CHRM4P08173 479 aa6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 CT62P0C5K7 136 aa6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 CDH3P22223 829 aa6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 ST13P50502 369 aaKnown RBP6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 CDH12P55289 794 aa6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 PPP2R2BQ00005 443 aa6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 CMPK2Q5EBM0 449 aa6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 FAM69BQ5VUD6 431 aa6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 LAIR2Q6ISS4 152 aa6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 PAGE2Q7Z2X7 111 aa6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 R3HCC1LQ7Z5L2 792 aaKnown RBP6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 BAHD1Q8TBE0 780 aaPredicted RBP6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 ZFYVE21Q9BQ24 234 aa6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 UGT2B28Q9BY64 529 aa6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 LIN28AQ9H9Z2 209 aaKnown RBP6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 PDP1Q9P0J1 537 aaPredicted RBP6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 WNT16Q9UBV4 365 aa6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 SNX7Q9UNH6 387 aa6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 GPR55Q9Y2T6 319 aaPredicted RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms